Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag1157 ATGGGAGTACTTGGTGGGATCATTCTAACAATTTATGGATATTATAAGATATTTAGAAGGAAAAAGGTAGTGAATGGTAAAGTACAGGTACAGTCGTCTTCTGATCAGGACCAGTGTGTACAACAGGATACACGAACGTTGAAGAAAAGTTTGGAATCTACAAGCAGCCTTGCCGGTAATTCGCCACGGCCAAGCGGTATTAAAGTTGACAGATCTGTGGAGTTCTCATACAAAGAGCTTGCCGAAGCTACTGATGATTTCAACTTAACTAATAAAATTGGTGAAGGTGGCTTCGGATATGTTTTTTATGCAGAATTGAGAGGAGAAAAAGCTGCAATTAAGCGAATGGATGTCCAAGCATCACAAGAATTTCTTGCTGAACTCAAAGTTCTCACTCATGTTCATCATCTGAACCTGGTCCGGTTGATAGGATATTGTGTTGAGGGCTCTCTATTCTTAGTCTACGAATATATTGAGAATGGCAACTTAGGTCAACATTTACGCTGCAAAGGAATTACGGAAGCATTGTCATGGCCGGCCAGAGTGCAAATTGCGCTGGATTCTGCAAGAGGGCTTGAGTACATCCATGAGCACACAGTTCCTGTATATATTCATCGTGACATCAAGCCAGCAAACATATTGCTTGACAAAAACTTCCGTGCAAAGGTTGCTGATTTTGGGTTAACAAAGTTGGCTGATATTAATAGTACCGGTTCACTTCATACACGTCTAGTGGGAACATTTGGATATATGCCTCCTGAGTACGCACAATATGGTGAAGTTTCAGCCAAGGTAGATGTATATGCTTTCGGTGTAGTCCTATATGAACTAATATCAGCTAAGGAAGCTATCGTCAAGACGAATCAATTTATTGCTGAATCCACTGGACTCGTTTCTCTGTTCGAATATGCACTGCGTCAACCTGAGCCTAAATCCGATCTTCTTCGTAATCTTGTTGACCCAAATCTAGGTGACAAATACCCTGTCGATTCAGTCCGTAAGATGGCTCAACTTGCTAAAGCCTGCACACAAGAAAATCCTCAACTAAGGCCAAGCATGAGGTCGATTGTTGTTGCGCTGGTCACACTTTCATCTTCAAATGAAGATTGGGATGTTGGTTCTTTCTATGAAAATGAAGCTTTAGTTAATCTAACTACAGGAAGATAG 1167 41.13 MGVLGGIILTIYGYYKIFRRKKVVNGKVQVQSSSDQDQCVQQDTRTLKKSLESTSSLAGNSPRPSGIKVDRSVEFSYKELAEATDDFNLTNKIGEGGFGYVFYAELRGEKAAIKRMDVQASQEFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLGQHLRCKGITEALSWPARVQIALDSARGLEYIHEHTVPVYIHRDIKPANILLDKNFRAKVADFGLTKLADINSTGSLHTRLVGTFGYMPPEYAQYGEVSAKVDVYAFGVVLYELISAKEAIVKTNQFIAESTGLVSLFEYALRQPEPKSDLLRNLVDPNLGDKYPVDSVRKMAQLAKACTQENPQLRPSMRSIVVALVTLSSSNEDWDVGSFYENEALVNLTTGR 388
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 8823645 8825932 - Conep06aG0120200.1 Cone6ag1157 440041
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag1157 388 SMART serkin_6 87 361 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone6ag1157 388 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone6ag1157 388 Gene3D Phosphorylase Kinase; domain 1 60 157 - -
Cone6ag1157 388 SUPERFAMILY Protein kinase-like (PK-like) 67 360 IPR011009 -
Cone6ag1157 388 ProSitePatterns Protein kinases ATP-binding region signature. 93 114 IPR017441 GO:0005524(InterPro)
Cone6ag1157 388 Gene3D Transferase(Phosphotransferase) domain 1 158 379 - -
Cone6ag1157 388 Pfam Protein tyrosine and serine/threonine kinase 88 359 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone6ag1157 388 FunFam PTI1-like tyrosine-protein kinase 3 158 374 - -
Cone6ag1157 388 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 3 385 IPR044812 GO:0019199(InterPro)|GO:0045087(InterPro)
Cone6ag1157 388 FunFam LysM receptor kinase 2 66 157 - -
Cone6ag1157 388 ProSiteProfiles Protein kinase domain profile. 87 363 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone3ag1321 Cone-Chr3:32159066 Cone6ag1157 Cone-Chr6:8823645 4.70E-168 dispersed
Cone6ag1157 Cone-Chr6:8823645 Cone2ag0294 Cone-Chr2:1523880 4.76E-66 dispersed
Cone6ag1157 Cone-Chr6:8823645 Cone20ag1276 Cone-Chr20:8330605 1.23E-93 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82953 PF03759 PRONE 1.50E-152 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag1157 K13429 - cit:102617134 536.954