Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag1160 ATGGAAGACGATCCACTTTCTTTCTTTGAAGGTTCTAGTCAATTGAATGAAGGTGGAAGAAGATCATCATTTGATCCAAACAGTGAAATGTTCAAGGCCCATGCAAAAAAGTTGGTAGAATCCCATGATGAGCTCCTACAGAACACTCTTGAGAGTGGAAGCTACAACAAGCTTTACAGCTTCAAGCATCTTGTTAATGCCTTCGCTGTCCACACCATCCCTTCTCAGGCGGAGAAGTTGAGATGTGCTGAAGGAGTAATGTTGGTAGAGAGAGATAGAGGTGTAAAGTTGATGACTACTTATACTCCTCAATTCTTAGGCTTGCCAAAAGACCGGGCCCACCACAACCTGCTGGAAGAATTAGGGCATGATCCTCCTCATCATCATCATCATCACAACAGTTATGACTTATTGGGTGAAGGGATTGTGATTGGTTTTGTGGACTCAGGGATTAATCCAACACATACAAGCTTTGCATTTGATCCCTTGCAACCTTCATTAGAAAGCAATGATCATAACTATGCATCTCGCTTTTCCGGTGCTTGTGAGATGGGCCCAAATTTCCCAGAAAGTTCATGCAATGGGAAGATCATTTCCGCTAGGTTTTTCTCTGCTGGGGCTCAAGCTTTCTCTACTTTTAATGCTTCCTTGGACTTTCTCTCGCCCTTTGATTCTTATGGACATGGCAGTCATGTGGCATCAATTGCTGCTGGAAATGCTGGGGTGCCTGTAGTTGTGAATGGTTTCTATTATGGACGAGCAAGTGGGATTGCGCCACGTGCAAGAATTGCGGTTTATAAAGCTACTTATAATAGCGCGTCCAGTATGTCAGATGTGTATAGTGCTATTGAACAAGCAGCTATAGATGGCGTGGATATTTTATCCATTTCTGTGGGACCCCCTGAACCAGAGAAAGATACATTTACATTCTTCAATGCATTTGATATATACCTGCAACGTGCAAGACGGGCTGGAATAATTGTAGTGCAAGCGGCTGGGAATGGTGGGCCAGGCCCATCTACAATTTCCTCTTACAGCCCTTGGGCTGTGGGTGTGGCCTCATCCACAACTGACCGATTCTACCCGAATTCTCTTCTTCTTGGAAATGGCCGAAAAGTTGGTGGATTCGGATTATCAGCACCTACGTTTGGAAAGGGACGTTTACTGCATAGGTTGGTATTGGCCAAGGACGCGATTAAGCCAAATGGGACATTCCCACCTTATAACATGGAAGAGTGTCAATATGCAGAAGCATTTGACAGAGAGATTGTGCGAGGCAGCATTCTCATCTGCACTCCCTCTGTTGGATTTTACAGCAATCGCTCCACCTTCAGTGCCATCGTTGATACAGCAAGAAAGCTAGAGTTGATGGGTTTCGTTTTTGTTGCAAATCCGAGTTATGGAAATTTCGAGCCTGACTTGTTTCCCACACTTGTTCCTAGCATCATGATCCCATATGTTGCCGACGCCAAGGTGATTTTAAGGTACTACAAGAAACATACACACAGGGATAAGAGAGGGTTGGCTACTAAATTCAAAGCCAAAGCAGGCATTGGAGAGGGAAGAGTTGCTTCCTTCGGTGGCAAAGCAGCACCGAGAGTCTCGAGATACTCATCGAGGGGTCCCGATTTCATTGATAGCAATAGAAAAATTGCAGCTGATGTTCTAAAGCCTGATATTCTTGCCCCAGGACACCTTGTTTGGGGTGCTTGGAGCCCTATAAGCACCAGCCAACCTTACTATCAAGGAAGCAATTTTGCACTCATGTCTGGAACAAGCATGGCCACCCCTCACATTGCGGGCGTAGCAGCATTGATTAAGCAGAAGAATCCGTGGTTGAGTCCTTCTATGATCGCATCAGCAATGTCCACAACCGCAACCAAATATGATCGCAAGAATGGACAGCTTATCATGGCAGAGGGATATTATTATGGCACTTTCTCTCCTTCTACTCCTTTCGATACAGGGGCTGGCCTTGTCAATCCCGCACGTGCTATCGACCCGGGCCTCGTCTTTTTCTCGGAATATGAAGACTATGCGAGATTTGCATGCACTATACCTGATATCAACACTAGCTACATAAGGTTCTGCAAGAAATTCCCATCCCTTGGACACCCGGCAAATTTGAATCTTCCTTCAATAACAATATCCAAATTGGTTGGATCCCAGCAATTGCATAGAAGGGTGAAGAATGTAGGGCGCAAAATAGAAACATATATTACCTCTGTGGTCCCACCAAACGGGACATCTGTTTCCATATGCCCTCCATGGTTTACCCTTTCTCCAGAAAAGACCCAACATTTAATCATACAAATCAATGTGACCAAGGAAAGGAATAGCTGGAGCTTTGGTGAAGTTGTATTCACTGGAACATTAAACCACATTGCAAGGATGCCCTTATCAGTCTTTCCCATTTCTATGTCCTAG 2427 44.83 MEDDPLSFFEGSSQLNEGGRRSSFDPNSEMFKAHAKKLVESHDELLQNTLESGSYNKLYSFKHLVNAFAVHTIPSQAEKLRCAEGVMLVERDRGVKLMTTYTPQFLGLPKDRAHHNLLEELGHDPPHHHHHHNSYDLLGEGIVIGFVDSGINPTHTSFAFDPLQPSLESNDHNYASRFSGACEMGPNFPESSCNGKIISARFFSAGAQAFSTFNASLDFLSPFDSYGHGSHVASIAAGNAGVPVVVNGFYYGRASGIAPRARIAVYKATYNSASSMSDVYSAIEQAAIDGVDILSISVGPPEPEKDTFTFFNAFDIYLQRARRAGIIVVQAAGNGGPGPSTISSYSPWAVGVASSTTDRFYPNSLLLGNGRKVGGFGLSAPTFGKGRLLHRLVLAKDAIKPNGTFPPYNMEECQYAEAFDREIVRGSILICTPSVGFYSNRSTFSAIVDTARKLELMGFVFVANPSYGNFEPDLFPTLVPSIMIPYVADAKVILRYYKKHTHRDKRGLATKFKAKAGIGEGRVASFGGKAAPRVSRYSSRGPDFIDSNRKIAADVLKPDILAPGHLVWGAWSPISTSQPYYQGSNFALMSGTSMATPHIAGVAALIKQKNPWLSPSMIASAMSTTATKYDRKNGQLIMAEGYYYGTFSPSTPFDTGAGLVNPARAIDPGLVFFSEYEDYARFACTIPDINTSYIRFCKKFPSLGHPANLNLPSITISKLVGSQQLHRRVKNVGRKIETYITSVVPPNGTSVSICPPWFTLSPEKTQHLIIQINVTKERNSWSFGEVVFTGTLNHIARMPLSVFPISMS 808
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 8847021 8850709 - Conep06aG0120500.1 Cone6ag1160 440044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag1160 808 Pfam Subtilase family 139 630 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cone6ag1160 808 Pfam Peptidase inhibitor I9 35 98 IPR010259 -
Cone6ag1160 808 PRINTS Subtilisin serine protease family (S8) signature 139 158 IPR015500 -
Cone6ag1160 808 PRINTS Subtilisin serine protease family (S8) signature 224 237 IPR015500 -
Cone6ag1160 808 PRINTS Subtilisin serine protease family (S8) signature 590 606 IPR015500 -
Cone6ag1160 808 SUPERFAMILY Subtilisin-like 98 670 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cone6ag1160 808 ProSiteProfiles Serine proteases, subtilase domain profile. 115 666 - -
Cone6ag1160 808 Gene3D - 685 803 - -
Cone6ag1160 808 CDD Peptidases_S8_3 95 627 IPR034197 -
Cone6ag1160 808 Gene3D Peptidase S8/S53 domain 141 679 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cone6ag1160 808 ProSitePatterns Serine proteases, subtilase family, histidine active site. 228 238 IPR022398 -
Cone6ag1160 808 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 98 IPR037045 -
Cone6ag1160 808 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 44 764 IPR045051 -
Cone6ag1160 808 CDD PA_subtilisin_like 364 498 - -
Cone6ag1160 808 MobiDBLite consensus disorder prediction 9 23 - -
Cone6ag1160 808 Gene3D - 358 527 - -
Cone6ag1160 808 Pfam Fibronectin type-III domain 708 802 IPR041469 -
Cone6ag1160 808 MobiDBLite consensus disorder prediction 1 25 - -
Cone6ag1160 808 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 144 155 IPR023827 -
Cone6ag1160 808 ProSitePatterns Serine proteases, subtilase family, serine active site. 591 601 IPR023828 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone6ag0846 Cone-Chr6:4320807 Cone6ag1160 Cone-Chr6:8847021 4.70E-09 dispersed
Cone6ag1160 Cone-Chr6:8847021 Cone8ag1278 Cone-Chr8:10541907 1.62E-78 dispersed
Cone5ag1529 Cone-Chr5:10482723 Cone6ag1160 Cone-Chr6:8847021 2.77E-171 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag1160 - - - 0.0