Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag1208 ATGCTTTTACTACCTCATCAAGTTATCATAGTACTGATAGCATTGATGAGTAGTAAAATTGGAGTGGAGGGTTTAAGCATGGATTACTACATGATGACATGTCCCTTCGCAGAACAAATTGTGAGGAACAGTGTCAACTCAGCTCTGCAAAATGATCCCACTCTTGCAGCTTCCCTTCTCAGAATGCATTTCCATGACTGCTTTGTAGAGGGGTGTGATGGGTCGGTGCTGTTAGATTCGACAGAGGATAACACAGCAGAGAAGGACTCGCCTGGTAATCTGAGCTTAAGGGGTTATGAAGTTATTGATGATATTAAGAACCAGCTTGAGATTCAATGCCCAGACATCGTCTCTTGTGCTGATATTCTTGCTTGGGCTGCTAGAGAGTCTGTTTTCTGGGCGGGGGGTCCATTCTATGATATACCAAAAGGGAGAAAAGATGGAAGGAGGAGTAAAATAGAAGATACAAGAAATCTGCCGCCACCATTTTTGAACGCTTCTCAGCTCATTTCCATGTTTGCCAAGCATGGCTTAAATGTACAAGATACCGTTGCTCTCTCTGGGGCCCACACATTAGGAGTGGCAAGATGCTCATCATTCAAAGCAAGGCTAAGCAGTGCAGATTCCACATTAGACGCAAACTTTGCAAAAACACTGTCGCAGACATGTAGTGGAGGAGACAATGCAGCGCAAGCATTTGACCCGACAAGAAACTCTTTCGACAACTTGTACTTCATCACCTTGTGGAGAAACTCCGGTGTTCTTTTCTCCGACCAGACCTTGTTCTCTAGTCCTCAAACCCGCAACATTGTTCAAGCTTATGCCATGAACCAGGCCATGTTCTTCTATAATTTCCAGTGGGCTATGGTCAAGATGGGAAGCATCGGCGTTAAGGATGAATCCAATGGAGAAGTCAGACAAAATTGCCGTAAAATTAACTGA 942 44.27 MLLLPHQVIIVLIALMSSKIGVEGLSMDYYMMTCPFAEQIVRNSVNSALQNDPTLAASLLRMHFHDCFVEGCDGSVLLDSTEDNTAEKDSPGNLSLRGYEVIDDIKNQLEIQCPDIVSCADILAWAARESVFWAGGPFYDIPKGRKDGRRSKIEDTRNLPPPFLNASQLISMFAKHGLNVQDTVALSGAHTLGVARCSSFKARLSSADSTLDANFAKTLSQTCSGGDNAAQAFDPTRNSFDNLYFITLWRNSGVLFSDQTLFSSPQTRNIVQAYAMNQAMFFYNFQWAMVKMGSIGVKDESNGEVRQNCRKIN 313
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 9431302 9433242 + Conep06aG0125300.1 Cone6ag1208 440092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag1208 313 SUPERFAMILY Heme-dependent peroxidases 24 313 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag1208 313 FunFam Peroxidase 28 161 - -
Cone6ag1208 313 Pfam Peroxidase 41 276 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag1208 313 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag1208 313 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag1208 313 PRINTS Plant peroxidase signature 287 300 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag1208 313 PRINTS Plant peroxidase signature 231 246 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag1208 313 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag1208 313 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag1208 313 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag1208 313 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag1208 313 PRINTS Plant peroxidase signature 247 264 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag1208 313 CDD secretory_peroxidase 24 312 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cone6ag1208 313 FunFam Peroxidase 160 292 - -
Cone6ag1208 313 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Cone6ag1208 313 Gene3D Peroxidase, domain 2 160 292 - -
Cone6ag1208 313 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag1208 313 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag1208 313 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag1208 313 PRINTS Haem peroxidase superfamily signature 233 248 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag1208 313 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag1208 313 PANTHER PEROXIDASE 25-RELATED 16 309 IPR000823 GO:0004601(PANTHER)|GO:0004601(InterPro)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Cone6ag1208 313 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601(InterPro)
Cone6ag1208 313 Gene3D - 28 313 - -
Cone6ag1208 313 ProSiteProfiles Plant heme peroxidase family profile. 24 313 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag1124 Cone-Chr1:55577059 Cone6ag1208 Cone-Chr6:9431302 2.62E-91 dispersed
Cone4ag1480 Cone-Chr4:11602469 Cone6ag1208 Cone-Chr6:9431302 7.01E-75 dispersed
Cone6ag1208 Cone-Chr6:9431302 Cone6ag1379 Cone-Chr6:11081891 3.86E-82 dispersed
Cone5ag1767 Cone-Chr5:12566731 Cone6ag1208 Cone-Chr6:9431302 1.51E-69 wgd
Cone6ag1208 Cone-Chr6:9431302 Cone9ag1186 Cone-Chr9:8467753 5.32E-197 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag1208 K00430 - rcu:8285000 449.899