Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag1236 ATGGGACAGGAAAATTTTGTACATAGAACAAATGGAGATAGTCATGAGGGCTGTTTACCTGGTGAGAGTGAAGAATCAGGAAGTCAGTCCTGCCAGAGTGTTGACGAGGAGGCTGGACAGGCTACTTGCCGTGTGTGCCAATGTACCGAGCCTGACAAAAGAGGCGAGATCATTTTAGAATTTCTGGGCATTACTCCTCCACTTCAAGAACCAGGAGAATCTAATAAGGATGTGAAGTCAGATACCGTGGAAGATTTAAAAAGAAATGGGGTTTCTGCTAAGAAAAATGCTAAAAGGGAATCTGGTTTGGTTGAGTTTGTAAGCCCTGATGGGGAGGTTTTCATTTGTAATATGGATTTAGAAATGGGTTCATGCCACAATCAAGATTCATTGGTGGTGCTTGGTTGTTCTTGTAAAAGTGACCTTGCTCTTGTACACTATGCATGTGCACTGAAGTGGTTTGTTAGCCATGGATCCACTGTCTGTGAAATCTGTGGATGCATGGCAAAAAATATTAGGATTGCTGACTTTAAAAAGGTGGTGGGTTCTTTAAAGGAATATGAAGCATTGCGGGAAAGAACTGCTGGTGGGGAACCTAATCCTACACATGTTTCTACAACTCCTGGTGTAGATCCTGATGCTGTTGCCGCTATTCGAAGGCAAAGACTTAGTGAGATCTCATTGTGGTTTGGCCCACATAATAATACCAATAATAATTCGAATGCAGTTGCTCAGGTTGTATCTGAACAACAACCTGTTAGTATTGTCTCAGAGGATGTCGGGCCTGCTGAAAATCCTGCAACCAAGTGGGCTATTGAAGGCACTGGGATTCTTCTGGCGACAGGGCTACTTACTGTTTCTCTTGCATGGCTCATAGCTCCTCGAGTGGGAAAGAATACTGCCAAAAGTGGTCTTCATATCCTGCTCGGTGGAGTTTGTGCTTTGACGGTTGTGGTTGTCTTCCGATTTGGCCTTAAACATTTGTGCTTTTTCCAATCTTGCAGTTTGTTCTTACCAGAATAA 1023 43.3 MGQENFVHRTNGDSHEGCLPGESEESGSQSCQSVDEEAGQATCRVCQCTEPDKRGEIILEFLGITPPLQEPGESNKDVKSDTVEDLKRNGVSAKKNAKRESGLVEFVSPDGEVFICNMDLEMGSCHNQDSLVVLGCSCKSDLALVHYACALKWFVSHGSTVCEICGCMAKNIRIADFKKVVGSLKEYEALRERTAGGEPNPTHVSTTPGVDPDAVAAIRRQRLSEISLWFGPHNNTNNNSNAVAQVVSEQQPVSIVSEDVGPAENPATKWAIEGTGILLATGLLTVSLAWLIAPRVGKNTAKSGLHILLGGVCALTVVVVFRFGLKHLCFFQSCSLFLPE 340
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 9837870 9841649 - Conep06aG0128400.1 Cone6ag1236 440120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag1236 340 MobiDBLite consensus disorder prediction 1 33 - -
Cone6ag1236 340 SUPERFAMILY RING/U-box 127 168 - -
Cone6ag1236 340 Pfam RING-variant domain 127 165 IPR011016 GO:0008270(InterPro)
Cone6ag1236 340 PANTHER ZINC FINGER, RING-CH-TYPE 29 319 - -
Cone6ag1236 340 ProSiteProfiles Zinc finger RING-CH-type profile. 108 172 IPR011016 GO:0008270(InterPro)
Cone6ag1236 340 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 108 175 IPR013083 -
Cone6ag1236 340 SMART ringv_2 125 166 IPR011016 GO:0008270(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone6ag1236 Cone-Chr6:9837870 Cone9ag1213 Cone-Chr9:8806032 6.88E-219 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag1236 - - - 0.0