Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag1237 ATGTATATCAAGCTCACCTTTTCGTATACATCGGTCTCTCAACCGATGGTTTTATATAGTTCTACCACTGTATATCATCTAAACAAATCTCTCAACTCTCACCAACAATGGAAGCTCTCTCCTCCCCACTTCTCCGTAACTGCAGAACACAGGCCCATAGCAAATCATAATCCTTATAATTATTTCACGAATAGGCTGAACCGAACGTGCCCGGATTCATTAACCTTCTCGCGCCATGAAGTTATGAGCCTCAGCTTCTTCTCATCATCTGCTAAACTATTAGTAAATTGTTCTGCAAGTACATCTCAAATAGCAATGGTAGGTGAAGTGGAAGAAGACGATAAGAAGAAGCGGTATAAATTTATCGTAGAAGAAGCCGGTTTGGTTAATAAGGAGCTGAGAGAGAGGTTTGCTTCGGGTATAACGAGGAGCTATGAATGGAGGGTGTTGCAGCTTAAGAGGATAGAGATGATGCTTGAAGATAGGGAAAAGGACATTTTAGATGCCCTTGACAAGGACCTCTCTAAACCTCCACTTGAGGCGTTCATAGCTGAGATTGGTACTGCCAAATCCTCATGTAAGTTGGCTCTAAGCGAACTGAATAAGTGGATGAAGCCAGAAAAGGCTAAAACTTCAATGACTACATCTCCATCATCAGCAGAAATCGTGTCGGAACCTCTAGGAGTTGTTCTGGTCATCTCACCATGGAATTTCCCTTTCTTATTATCGATCGAGGCCGTTATCGGAGCAATCTCAGCTGGAAATTGTGTCTTACTAAAACCATCAGAAATTGCTCCCAGCACGTCATCATTGCTTGCCAAAATATTACCGGAATATGTCGATAGTTCTTCCATACGAGTCGTAGAGGGTGCTGTCCCTGAAACCACTGCCCTCCTCGAAATGAAATGGGACAAGATTTTCTTTACAGGGAGTGCAAGAGTAGGGCGAATTGTGATGGCTGCTGCTGTAAAGCATCTTACACCTGTGCTTTTGGAGCTTGGAGGGAAGTGCCCTGCTGTTGTTGATTCAAACATTGACTTACAAGTTGCTACTAGGAGGATAATAGCAGGTAAATGGGCATGCAACAGTGGACAAGCTTGCATTGGTGTTGATTATATCATCACAACCAAAGACTTGGCTCCAAAGTTGATAGATTCTTTGAAGTATGAATTAGAGCAATGCTTCGGTAATGAACCATTGAAATCGAAAGACATGTCTCGGATTGTGTCCCCGTCTCACTTCGCACGGTTAATAAAGCTCATGGATGAAGAGGGAGTCTCCGATAAAATTGTTCTTGGAGGTCAAAGGGACCCAGATCGATTAAGGATTGCTCCAACCCTATTTTTGGATGTTCCGGTAGACTCCCAGATAATGAAAGAGGAGATATTCGGACCATTGCTTCCCATTCTCACGGTTGAGAAGTTGCAAGATAGCTTTGATTTGATCAACTCAAAGCCGAAACCTCTAGCGGCATACCTATTCACTGACGATCAACAATTGAAGAAGCAATTCGTGCAGAACATATCCTCCGGAGGAATGCTCATCAATGATACCATCATACACGTGACTGTTGATAGTTTACCATTTGGAGGGGTAGGGGAGAGTGGGATGGGGAATTACCATGGGAAGTTCTCATTCGATGCATTTAGTCATAAGAAAGCAGTGCTTTATAGGAGTTTCACTGGGGATACTTCTGTGAGGTATCCACCATACACACCTCAAAAGACAGCTCTAATGAAAGCTCTCCTCAGTGGTAACATTTTCTCCATTCTTCTGGCCTTGATTGGATGGTCGGTCTAG 1800 43.28 MYIKLTFSYTSVSQPMVLYSSTTVYHLNKSLNSHQQWKLSPPHFSVTAEHRPIANHNPYNYFTNRLNRTCPDSLTFSRHEVMSLSFFSSSAKLLVNCSASTSQIAMVGEVEEDDKKKRYKFIVEEAGLVNKELRERFASGITRSYEWRVLQLKRIEMMLEDREKDILDALDKDLSKPPLEAFIAEIGTAKSSCKLALSELNKWMKPEKAKTSMTTSPSSAEIVSEPLGVVLVISPWNFPFLLSIEAVIGAISAGNCVLLKPSEIAPSTSSLLAKILPEYVDSSSIRVVEGAVPETTALLEMKWDKIFFTGSARVGRIVMAAAVKHLTPVLLELGGKCPAVVDSNIDLQVATRRIIAGKWACNSGQACIGVDYIITTKDLAPKLIDSLKYELEQCFGNEPLKSKDMSRIVSPSHFARLIKLMDEEGVSDKIVLGGQRDPDRLRIAPTLFLDVPVDSQIMKEEIFGPLLPILTVEKLQDSFDLINSKPKPLAAYLFTDDQQLKKQFVQNISSGGMLINDTIIHVTVDSLPFGGVGESGMGNYHGKFSFDAFSHKKAVLYRSFTGDTSVRYPPYTPQKTALMKALLSGNIFSILLALIGWSV 599
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 9852226 9861166 + Conep06aG0128500.1 Cone6ag1237 440121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag1237 599 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 134 553 IPR016162 GO:0016491(InterPro)
Cone6ag1237 599 PANTHER ALDEHYDE DEHYDROGENASE 129 597 IPR012394 GO:0004029(PANTHER)|GO:0005737(PANTHER)|GO:0006081(InterPro)|GO:0006081(PANTHER)
Cone6ag1237 599 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 335 535 IPR016163 GO:0016620(InterPro)
Cone6ag1237 599 FunFam Aldehyde dehydrogenase 335 535 - -
Cone6ag1237 599 Pfam Aldehyde dehydrogenase family 148 555 IPR015590 GO:0016491(InterPro)
Cone6ag1237 599 FunFam Aldehyde dehydrogenase 134 338 - -
Cone6ag1237 599 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 360 371 IPR016160 GO:0016491(InterPro)
Cone6ag1237 599 SUPERFAMILY ALDH-like 133 570 IPR016161 GO:0016491(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone6ag1237 Cone-Chr6:9852226 Cone6ag1661 Cone-Chr6:12657126 7.96E-149 dispersed
Cone4ag1417 Cone-Chr4:11327271 Cone6ag1237 Cone-Chr6:9852226 1.05E-223 wgd
Cone6ag1237 Cone-Chr6:9852226 Cone7ag1521 Cone-Chr7:10561375 4.67E-226 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag1237 K00128 - vvi:100266331 716.072