Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag1271 ATGGCTCTACCAGCATCAGACAGTAGTCTTCCAAATAATACCGAACCAATAGTATGTTATGCGCCAAACATGATTACGACGAATGGGATATGGCAGGGCGACAACCCTTTGGATTATTCGCTACCTCTCTTTATTCTTCAGTTGAGCATGATCGTTATTCTCACTCGCATTCTTGTTTTCATCCTCAAACCCTTACGTCAACCCCTTGTCATCTCCGAAATTCTGGGAGGAGTAATCTTAGGCCCTTCGGTACTTGGCCGCAACGCAAAATTCGCCGACACGGTTTTCCCTCTAAGAAGTGTAATGGTCTTAGAAACAATGGCAAACATCGGTCTCCTTTACTTCCTCTTCTTAATCGGAGTGGAAATGGACATTACGGTCATTAAACGCACCGGAAAAAAGGCCTTGGCGATCGCAATTGGAGGCATGGTCTTACCTTTCACAATAGGGGCATCTTTCTCCTTGGTCATGCACAAAAAAGACCCGAATATGAACGAAGCCACATTTGTCCTCTTTCTAGGTGTAGCACTTTCCGTCACGGCTTTTCCCGTGCTAGCAAGAATTCTAGCTGAGCTTAAACTCATAAACACAGAGCTGGGGAGAATGGCCATGTCAACGGCTCTTATTAACGATATAACAGCTTGGGTTCTTCTAGCCCTAGCCATAACTCTAGCCGAGAATCACAAGGCTTCAGCAGCTACAATATGGGTGATTTTATCATGCATAGGGTTCATTTGCGTTTGCTTTTTCGTGGTTCGGCCGTGCCTTTCTTGGGTCGTAAGAAAGACCCCAGAAGGGGAGAGTTTTAGTGACTTATATATATGTTTGATACTTACAGGAGTTATGGTATCTGGGTTTGTCACAGATGCAATTGGAACACATTCTGTATTAGGTGCATTTGTGTTTGGTTTGGTGATTCCAAATGGCCCACTTGGGGTTGCATTGATAGAGAAGCTTGAGGATTTTGTTTCTGGCCTTTTGCTGCCTCTTTTCTTCGCTATTAGTGGGCTTAGGACTAATGTGAAAGCCTTAAGTGGATTTTCCACATGGGCTTTTACTATGCTTGTGATTGTACTAGGTTGTGCTGGAAAAGTAGCTGGTACTGTTCTTATCTGTTTCTTTTATCAGATGCCCTTCTATGAAGGAGTTACTCTTGGCTTGTTGTTGAATACTAAAGGCCTTGTTGAAATGATCATTCTTAATGTTGGGAGGGACCAAAAGGTCTTAGACGATGAAGCATTTGCAATGATGGTAATCGTAGCCATAACAATGACTGGAATCATAACCCCACTAGTCACCGCAATCTACAAACCCTCGAGAAGATCGATCGCCTACAAGAAACGAACAATCCAAAGATCCAGGCCCGATTCGGAACTACGAGTCCTCATATGCATTCACAACCCTAGAAATGTCCCGACAATCATCAACCTCATAGAAGCCACTCACCCAACAAAAAAATCCCCCATTTGTATCTACGTGCTCCACTTGGTCGAACTATCGGGCCGGGCCTCCGCCATGCTAATCATCCACAACACCCGAGAATCCGGAAAGCGGGCCCTAAACCGTACCCAAGCCCAATCCGATCACATCATAAACGCTTTTACTAACTACGAATCTCACGCAAATAATTGTGTTTCGGTTCAACCCCTAACCGCCATTTCTCCATACCCCACGATGCACGAAGATATTTGTAATTTGGCCGAGGATAAAAGGGTTGCGTTTATTATCCTTCCGTTTCACAAGCAACAAACAGTTGATGGGTGGATGGAGGCTACAAATCCGGCTTTTAGGACAGTGAATTTGAATGTGTTGGCAAACGCGCCATGTTCAGTAGGGATTTTGATTGATAGAGGGCTCAATGGGGCTACCCGTAATTTGGCTTCTAATAAAATGGCTCACCATGTTGTCTTGTTGTTCTTTGGCGGACCTGATGATAGAGAAGCTTTGTCATATGCATGGAGAATGTCAGAGCATCCAGGTACAAACTTGACCGTAATGAGGTTTGTAGCTGCTGAAGAAGCACGTAGAGAGTCTCATAGTGAACCAGAAGGCCTATTAACAGTAGAAACAGATGTTGAGAAGAACCTCGACGAAAGGTGTTTGAATGAGTTCAAAATGAAGGCAGCTCATCAAGAATCAATAATCTATACAGAGATTGTGTTGAATGATGGAGATCAAACGGTGGCGGCGATAAGGAGTATAGACACTGCACATGATTTGTTTATAGTTGGGAGAGGACAAGGCGTAATCTCACCCCTAACAGCCGGATTGATGGATTGGAGCGAGTGTCCGGAGCTCGGACCGATAGGAGACTTGTTGGCATCTTCGGATTTTGCATCCAATGTTTCAGTTTTGGTGGTGCAACAATATGTTGGAATAGGAATCAATGGAGACATTGTTGGAACTCCGGATAGCCCATTAGGGAAAGTAGACCATCATTTACAGTTTAGTAAATCAAAACCATAA 2466 44.08 MALPASDSSLPNNTEPIVCYAPNMITTNGIWQGDNPLDYSLPLFILQLSMIVILTRILVFILKPLRQPLVISEILGGVILGPSVLGRNAKFADTVFPLRSVMVLETMANIGLLYFLFLIGVEMDITVIKRTGKKALAIAIGGMVLPFTIGASFSLVMHKKDPNMNEATFVLFLGVALSVTAFPVLARILAELKLINTELGRMAMSTALINDITAWVLLALAITLAENHKASAATIWVILSCIGFICVCFFVVRPCLSWVVRKTPEGESFSDLYICLILTGVMVSGFVTDAIGTHSVLGAFVFGLVIPNGPLGVALIEKLEDFVSGLLLPLFFAISGLRTNVKALSGFSTWAFTMLVIVLGCAGKVAGTVLICFFYQMPFYEGVTLGLLLNTKGLVEMIILNVGRDQKVLDDEAFAMMVIVAITMTGIITPLVTAIYKPSRRSIAYKKRTIQRSRPDSELRVLICIHNPRNVPTIINLIEATHPTKKSPICIYVLHLVELSGRASAMLIIHNTRESGKRALNRTQAQSDHIINAFTNYESHANNCVSVQPLTAISPYPTMHEDICNLAEDKRVAFIILPFHKQQTVDGWMEATNPAFRTVNLNVLANAPCSVGILIDRGLNGATRNLASNKMAHHVVLLFFGGPDDREALSYAWRMSEHPGTNLTVMRFVAAEEARRESHSEPEGLLTVETDVEKNLDERCLNEFKMKAAHQESIIYTEIVLNDGDQTVAAIRSIDTAHDLFIVGRGQGVISPLTAGLMDWSECPELGPIGDLLASSDFASNVSVLVVQQYVGIGINGDIVGTPDSPLGKVDHHLQFSKSKP 821
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 10152369 10155279 + Conep06aG0131900.1 Cone6ag1271 440155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag1271 821 Gene3D - 43 444 IPR038770 -
Cone6ag1271 821 Gene3D - 479 764 - -
Cone6ag1271 821 FunFam Cation/H(+) antiporter 15 43 443 - -
Cone6ag1271 821 Pfam Sodium/hydrogen exchanger family 53 432 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
Cone6ag1271 821 PANTHER CATION/H + ANTIPORTER 19 790 IPR050794 GO:0006885(PANTHER)|GO:0012505(PANTHER)|GO:0015672(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0428 Cone-Chr12:2533252 Cone6ag1271 Cone-Chr6:10152369 1.14E-10 dispersed
Cone17ag0294 Cone-Chr17:1409289 Cone6ag1271 Cone-Chr6:10152369 2.33E-226 dispersed
Cone20ag1063 Cone-Chr20:7422683 Cone6ag1271 Cone-Chr6:10152369 1.28E-104 dispersed
Cone20ag1107 Cone-Chr20:7619235 Cone6ag1271 Cone-Chr6:10152369 2.46E-220 dispersed
Cone5ag0163 Cone-Chr5:681794 Cone6ag1271 Cone-Chr6:10152369 1.76E-87 dispersed
Cone5ag0652 Cone-Chr5:2788928 Cone6ag1271 Cone-Chr6:10152369 7.67E-126 dispersed
Cone5ag0653 Cone-Chr5:2792546 Cone6ag1271 Cone-Chr6:10152369 6.34E-129 dispersed
Cone6ag1271 Cone-Chr6:10152369 Cone9ag0825 Cone-Chr9:3996401 6.67E-248 dispersed
Cone11ag0035 Cone-Chr11:194641 Cone6ag1271 Cone-Chr6:10152369 2.16E-38 transposed
Cone12ag0018 Cone-Chr12:165910 Cone6ag1271 Cone-Chr6:10152369 0 wgd
Cone6ag1271 Cone-Chr6:10152369 Cone8ag0012 Cone-Chr8:121980 8.76E-88 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag1271 K26731 - cit:102623470 1218.76