Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone6ag1281 | ATGCCTAGTTGGTGGGGTAAAAAGCCTAGCAAGAAGAAACCTACCGACAACAACAACAAGCCCAAGAGCTTTGACGAGGTCTTCTCTCCCACGACTCCATCTCGCAATTCACCGAGTTCCAGCAACAATCCGTCATCTTCAGGGTCGGTTCCCGGCGGGTTTTCTGGCTTCTCGGGGTTCGATTCTGATAATGGCGAACGGAGAGGGCACCCTCTCCCTCGTCCAGCCCTACCGCAGACCTTTGCGATTGATAATGGGGTTTCTGGGTCGGGCTCGGTTTCAAGTGTTAGCTCTTCCGGGTCGTCGGATGATCATCCAGTTGCCGCTCAGGATCAGGAGTTTGGTAATTTCAGAGGACTTGGTAATGTGAAGATAGATATGAGGTCAAGGAGTCCGGGTCCCAGACCAAGAGGGGGGTCCACAAGCCCGACATTGCCTCTTCATCAACGGTTGTGTGGCTTTAGCTTAGATTCACCAGATGGAAAGAGTCAGTGTCATAAGCTTCCTCTTCCTCCAGGTTCTCCTACTAGCCCTAATTCTTCCTTGATGAATGTAAAGTCGATCCCAGCTGGTGAAAACTTGCATACTCAATCAAAATGGAAGAAAGGAAAGCTTTTAGGAAGGGGCACTTTTGGACATGTTTACCTTGGATTCAATAGTATAAGTGGGCAAATGTGTGCCATAAAAGAAGTACGGGTTGTAAGTGATGATAACTCATCAAAAGAATGTCTTCGGCAACTGAACCAGGAGATAAATTTGCTTAGTCAGCTTTCACATCCAAATATTGTTCAATACTATGGCAGTGAAATGGGTGATGAAGCACTCTCGGTCTATTTAGAATACGTCTCAGGTGGCTCAATCCACAAATTAGTTCAAGAATACGGGCCTCTTAAGGAGCCTGTTATACAAAATTACACCCGAAAGATTGTTTCTGGGCTTGCCTATCTACATGGAAGAAATACAGTGCACAGGGACATCAAGGGGGCAAACATATTAGTAGATCCGAATGGGGAGATCAAGTTGGCGGATTTTGGCATGGCTAAACATATAACTAATTGTACATCAATGCTTTCTTTCAAAGGAAGTCCTTACTGGATGGCACCCGAGCTTGTTATGAATGCAAATGGATACAGTCTTGCAGTAGATATATGGAGCTTGGGTTGCACAGTTATCGAAATGGCAACTTCTAAACCCCCTTGGTACAAGTATGAAGGGGTAGCTGCTATATTCAAGATTGGAAACAGCAAAGAGCTTCCCGAAATTCCGGATCATCTATCTAATGATGCAAAACATTTTGTGAAATTCTGCTTGCAGCGGTGCCCGGAAGCCCGACCCACTGCCTCACAACTGTTAGACCACCCTTTTCTACGAGATCAATCGACAAATAGAGTTGCTCATCTAAGTCATCTTAATTTCTCCATGGATGCCTTTTCCCACTCACTTGATGGAAGCCAAACTCCACTAACCTTAGATCATTGCCCCAGAAGAAAAAGTACAAGTACATGTGATAGAGAATACCCGACAAGTCCGCTAAGCATGACTTCCCAGGCACTCATAAGCCCAAGGAATTCGAAGATGCCGATAGAAATGCCGAAAGGCCTTCCGTTTGTAGTGGATACATGGTCGCCGTCATCGAGGAAGAAAAGGTATCAATTCCTGACTCATGCTCACAAGGATCACACGTCTGGGATCTCTGCTCATGCTTCCTATCCGATTTATTGTGCGAATTTCACTAAAACCCTAGTTCTTCAGCAATATCCTCAGCTTAGTGAATCGTTGTTTGTTGGTATCGAAGTAGCGCAATCTGTGGTGATCGATGATGTTGATGGAGCTTTCACTGTGACGGCTTTTGATGCGAATCATTGCCCTGGAGCCTTAATGTTCTTGTTTGAAGGCAATTTTGGCAATATCCTACACACTGGAGATTGCAGACTTACTCCAGAGTGCCTACAAAATTTACCCGAGAAGTATCTCAGCAGAAAAGGAAAAGAGCCAAAGTGTCCACTAGATTTTGTATTCCTAGATTGTACATTTGGCAGATCCTCTCAAAAGTTTCCAAGCAAGCATTTAGCTATTCATCAGGTTATCAATTGCATATGGAAGCATCCTGATGCTCCTGTGATTTACCTTAGCTGTGATCTTCTTGGTCAGGAAGACATACTGAGACAGGTTTCCCAAACATTTGGAACAAAGATATATGTTGATCGATCCAAAAGTCCAGATTGTTACCAAGCTCTTGCCCTTACATCTCCCGAAATCATCTCACAAGATTCATCTTCCCGCTTCCAGATATTTGATGGGTTTCCTAGATTATATGAAAGAGCCAAACTGAAACTTGATGAGGCACGGAAGAAATTCCAGGATGAGCCTCTTATTATACGCCCATCTGCTCAGTGGTATGTTTGTGATGAAGAGTTTTCAGAGGGCGTAAGTACAAGGAATCAGAGAATTAATGAAGCTGTGAAGGATCAGTCTGGTGTTTGGCATGTATGTTACTCAATTCACTCATCCAAGGAAGAATTAGAATGGGCTCTACACAGTTTAGCACCTCAGTGGGTCGTTTCAACGTCTCCCAGTTGTCGGGCCATGGAGTTGAATTATATTAAGAAACACTGTGCTCTCACTAAAATAACATCAAATCATCCAATTTGGAAGCTTCTGGATTTTTCCATTGAATCTTCTTTGAATGAAGATGCATCAGTAGAAGTACAATGTTCATTGGTTGAAGGACCCTCTGAAACTTATTTAGAAACTCAATTATTACAAATAGAAGAAAAGATATCTGCTAAGCCAAAATTATGTTTATCACCTCTGAGCAAAAAGTTGCCTGTAACATTATTTGGAAAAGCCAGACTTGGTCTCCGTGATCTAAATTTCTATGAGGAACCAAAAATGGTGTCTAAAAACACTGACCCTCCACAAGCTGTTGATGAAAACAAAGTGGAACAACTCTGCCAAGAGGAAAAGCGGGAATCAATAGAGGAAAATTCTTTAGAGAGTCGGATAGAGGGTGGTGTTTTTCAAGTAGTACAAAGTGAAAAATTAGCTGAAGGAGCCAAAGAGGTTCATAGAAATGCTTCTTGTTTAACAGTTGGATCTTCAAATGCTGGATTTAGTGAGAAGTTTAGAAAGCTATACCGGGTGATGAATGTTCCTGTGCCCGAGCCTCTTCCTTCCTTGGTGGAACTTCTGAAGTCTGGAAAAAGTGTGAAAAGGAGGTTCGAGTTTTAG | 3231 | 43.05 | MPSWWGKKPSKKKPTDNNNKPKSFDEVFSPTTPSRNSPSSSNNPSSSGSVPGGFSGFSGFDSDNGERRGHPLPRPALPQTFAIDNGVSGSGSVSSVSSSGSSDDHPVAAQDQEFGNFRGLGNVKIDMRSRSPGPRPRGGSTSPTLPLHQRLCGFSLDSPDGKSQCHKLPLPPGSPTSPNSSLMNVKSIPAGENLHTQSKWKKGKLLGRGTFGHVYLGFNSISGQMCAIKEVRVVSDDNSSKECLRQLNQEINLLSQLSHPNIVQYYGSEMGDEALSVYLEYVSGGSIHKLVQEYGPLKEPVIQNYTRKIVSGLAYLHGRNTVHRDIKGANILVDPNGEIKLADFGMAKHITNCTSMLSFKGSPYWMAPELVMNANGYSLAVDIWSLGCTVIEMATSKPPWYKYEGVAAIFKIGNSKELPEIPDHLSNDAKHFVKFCLQRCPEARPTASQLLDHPFLRDQSTNRVAHLSHLNFSMDAFSHSLDGSQTPLTLDHCPRRKSTSTCDREYPTSPLSMTSQALISPRNSKMPIEMPKGLPFVVDTWSPSSRKKRYQFLTHAHKDHTSGISAHASYPIYCANFTKTLVLQQYPQLSESLFVGIEVAQSVVIDDVDGAFTVTAFDANHCPGALMFLFEGNFGNILHTGDCRLTPECLQNLPEKYLSRKGKEPKCPLDFVFLDCTFGRSSQKFPSKHLAIHQVINCIWKHPDAPVIYLSCDLLGQEDILRQVSQTFGTKIYVDRSKSPDCYQALALTSPEIISQDSSSRFQIFDGFPRLYERAKLKLDEARKKFQDEPLIIRPSAQWYVCDEEFSEGVSTRNQRINEAVKDQSGVWHVCYSIHSSKEELEWALHSLAPQWVVSTSPSCRAMELNYIKKHCALTKITSNHPIWKLLDFSIESSLNEDASVEVQCSLVEGPSETYLETQLLQIEEKISAKPKLCLSPLSKKLPVTLFGKARLGLRDLNFYEEPKMVSKNTDPPQAVDENKVEQLCQEEKRESIEENSLESRIEGGVFQVVQSEKLAEGAKEVHRNASCLTVGSSNAGFSEKFRKLYRVMNVPVPEPLPSLVELLKSGKSVKRRFEF | 1076 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 10240385 | 10252386 | - | Conep06aG0132900.1 | Cone6ag1281 | 440165 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone6ag1281 | 1076 | Gene3D | Transferase(Phosphotransferase) domain 1 | 196 | 485 | - | - | |
Cone6ag1281 | 1076 | SUPERFAMILY | Metallo-hydrolase/oxidoreductase | 537 | 863 | IPR036866 | - | |
Cone6ag1281 | 1076 | MobiDBLite | consensus disorder prediction | 1 | 182 | - | - | |
Cone6ag1281 | 1076 | FunFam | Mitogen-activated protein kinase kinase kinase | 198 | 480 | - | - | |
Cone6ag1281 | 1076 | PANTHER | MAP KINASE KINASE KINASE SSK2-RELATED-RELATED | 64 | 461 | IPR050538 | - | |
Cone6ag1281 | 1076 | MobiDBLite | consensus disorder prediction | 21 | 53 | - | - | |
Cone6ag1281 | 1076 | FunFam | DNA repair metallo-beta-lactamase family protein | 534 | 701 | - | - | |
Cone6ag1281 | 1076 | SMART | serkin_6 | 200 | 456 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone6ag1281 | 1076 | ProSiteProfiles | Protein kinase domain profile. | 200 | 456 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone6ag1281 | 1076 | MobiDBLite | consensus disorder prediction | 83 | 106 | - | - | |
Cone6ag1281 | 1076 | Pfam | DNA repair metallo-beta-lactamase | 750 | 860 | IPR011084 | - | |
Cone6ag1281 | 1076 | CDD | STKc_MEKK1_plant | 199 | 456 | - | - | |
Cone6ag1281 | 1076 | Gene3D | - | 534 | 856 | IPR036866 | - | |
Cone6ag1281 | 1076 | FunFam | DNA repair metallo-beta-lactamase family protein | 684 | 835 | - | - | |
Cone6ag1281 | 1076 | MobiDBLite | consensus disorder prediction | 488 | 508 | - | - | |
Cone6ag1281 | 1076 | SUPERFAMILY | Protein kinase-like (PK-like) | 198 | 525 | IPR011009 | - | |
Cone6ag1281 | 1076 | Gene3D | - | 684 | 835 | - | - | |
Cone6ag1281 | 1076 | ProSitePatterns | Protein kinases ATP-binding region signature. | 206 | 229 | IPR017441 | GO:0005524(InterPro) | |
Cone6ag1281 | 1076 | Pfam | Protein kinase domain | 201 | 456 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone4ag1709 | Cone-Chr4:12683020 | Cone6ag1281 | Cone-Chr6:10240385 | 8.57E-17 | dispersed | |
Cone6ag1281 | Cone-Chr6:10240385 | Cone8ag0112 | Cone-Chr8:570627 | 7.36E-101 | dispersed | |
Cone12ag0023 | Cone-Chr12:182913 | Cone6ag1281 | Cone-Chr6:10240385 | 2.96E-239 | wgd | |
Cone6ag1281 | Cone-Chr6:10240385 | Cone7ag1466 | Cone-Chr7:10327736 | 6.30E-29 | wgd | |
Cone6ag1281 | Cone-Chr6:10240385 | Cone8ag0019 | Cone-Chr8:140232 | 1.00E-236 | wgd | |
Cone6ag1281 | Cone-Chr6:10240385 | Cone9ag1239 | Cone-Chr9:9076150 | 1.24E-254 | wgd | |
Cone6ag1281 | Cone-Chr6:10240385 | Cone9ag1329 | Cone-Chr9:9976718 | 2.88E-40 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
82958 | PF13812 | PPR_3 | 2.90E-06 | CL0020 | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone6ag1281 | - | - | - | 0.0 |