Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone6ag1330 | ATGGCTGGAACTTCATCAATAGGCCTTTTGGAAATACTAGCAGCACTATTTTCCTTCATTTCTATTCTCCTTCTTAGAAGCTTAAGAAATACAAATGATCTTCCATGGAATTTCCCCTTTCTTGGAATGGTACCTACCATTATCCATCACTCTCACCGCATCCACGATCGTGCCACTGAATTGTTGCGTCTCTCCGGATGTAGTTTTCTGATAAAAGGGATTTGGTTTGCAAATCTCGACATGTTGCTCACAGCTGACCCTGCCAATATACACCACATAATGAGCGCAAACTTTGTGAATTTTCCAAAAGGGCCTGGATTCAAGTACATCTTTGACATTTTGGGAGATGGGATTTTCAATTCAGACGCGGACTTGTGGAAGGATCAAAGAAGAATAGCTCAAAAGTTGGTTAGTCACAAGCGCTTTTACCAATTCATGGTGAAGACAAGCAAGTATAAGGTGGAGAAAGGATTAGTTCCTATTCTTGATCATGTTTCCGAAAAAGGGCTTGTCATAGATTTTCAAGACTTGTTTCAAAGGTTTTCTTTTGATTCTACTTGTATGTTGGTTACTGGATTTGATCCCACTAGTCTTTCTATTGAATTTCCGGATGTTCCATTCTCTAAGGCCATGGATGATGCCGAGGAAGTGATATTTTACCGGCATTTCATTCCCAAAAGACTTTGGGAATTACAAAAGTTTCTAGGGTTTGGACTTGCAAAGAGGTTAGGAAATGCTTGGGAAACTATTGATGAAACTATTTCCGAACTTATTACTATGAAAAAGGCGAAGATTCACCGCCAAGTCGAACCGCAAGAGTTTGAAGAAGAAGGAGTTGATCTTATAGAATCATACATGAATGAAGATAAGAAATTATCGGACGATAAGTTCTTGAGAGATACAATCTTGAACTTTATGATTGCCGGTAGGGACACTACAAGCTCAGCTCTCTCCTGGTTTTTCTGGCTTATTTCGAAGAATCCATTAGTACTCATCAAGATAAGAGAGGAGCTTAAACAAGAAGTATTAACCCCAGCTAATGAAGCACATGAAAAATGGAGGGTTTTTGATATTGAAGAGGTAAACAAATTGGTTTACTTGCATGCAGCTTTATGCGAGTCTCTTCGGCTTTACCCTCCGGTTCCATTTCAACATAAGGAACCTGTCCAACCAGATATTCTTCCAAGTGGTCACCATGTGAGTCCTAAAATAAAGGTCTTATTCTCTATGTATGCATTGGGAAGGATGGAATCGGTATGGGGAAAAGATTGCGAGGAATTCAATCCAGAGAGGTGGATTTCTGTGAGCGGAAAGATCAAACACAAGCCCTCGTACAAGTTTATGGCTTTCAATGCCGGACCGAGGACTTGTTTGGGAAAAGAAGTGGCATTCACTCAAATGAAGTTGACTGTGGCAGCTATACTCCATAACTATGATGTTGAAGTAGTGGAAGGACAACATATTACTCCAAGTGCTTCCATTATTCTTCATATAAAGCATGGCTTGAAGATCAAGGTTACAAAACGATGGACTTGA | 1536 | 39.91 | MAGTSSIGLLEILAALFSFISILLLRSLRNTNDLPWNFPFLGMVPTIIHHSHRIHDRATELLRLSGCSFLIKGIWFANLDMLLTADPANIHHIMSANFVNFPKGPGFKYIFDILGDGIFNSDADLWKDQRRIAQKLVSHKRFYQFMVKTSKYKVEKGLVPILDHVSEKGLVIDFQDLFQRFSFDSTCMLVTGFDPTSLSIEFPDVPFSKAMDDAEEVIFYRHFIPKRLWELQKFLGFGLAKRLGNAWETIDETISELITMKKAKIHRQVEPQEFEEEGVDLIESYMNEDKKLSDDKFLRDTILNFMIAGRDTTSSALSWFFWLISKNPLVLIKIREELKQEVLTPANEAHEKWRVFDIEEVNKLVYLHAALCESLRLYPPVPFQHKEPVQPDILPSGHHVSPKIKVLFSMYALGRMESVWGKDCEEFNPERWISVSGKIKHKPSYKFMAFNAGPRTCLGKEVAFTQMKLTVAAILHNYDVEVVEGQHITPSASIILHIKHGLKIKVTKRWT | 511 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 10730696 | 10732331 | + | Conep06aG0138500.1 | Cone6ag1330 | 440214 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone6ag1330 | 511 | SUPERFAMILY | Cytochrome P450 | 29 | 509 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag1330 | 511 | PRINTS | E-class P450 group I signature | 317 | 343 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag1330 | 511 | PRINTS | E-class P450 group I signature | 457 | 480 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag1330 | 511 | PRINTS | E-class P450 group I signature | 447 | 457 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag1330 | 511 | PRINTS | E-class P450 group I signature | 297 | 314 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag1330 | 511 | PRINTS | E-class P450 group I signature | 368 | 386 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag1330 | 511 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 450 | 459 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cone6ag1330 | 511 | PANTHER | CYTOCHROME P450 | 23 | 502 | - | - | |
| Cone6ag1330 | 511 | Pfam | Cytochrome P450 | 37 | 493 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag1330 | 511 | CDD | CYP86A | 69 | 502 | - | - | |
| Cone6ag1330 | 511 | Gene3D | Cytochrome P450 | 31 | 509 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag1330 | 511 | PRINTS | P450 superfamily signature | 448 | 457 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag1330 | 511 | PRINTS | P450 superfamily signature | 457 | 468 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag1330 | 511 | PRINTS | P450 superfamily signature | 308 | 325 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag1330 | 511 | PRINTS | P450 superfamily signature | 369 | 380 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone6ag1330 | Cone-Chr6:10730696 | Cone6ag1339 | Cone-Chr6:10790638 | 7.62E-222 | dispersed | |
| Cone6ag1322 | Cone-Chr6:10675143 | Cone6ag1330 | Cone-Chr6:10730696 | 7.17E-212 | proximal | |
| Cone6ag1330 | Cone-Chr6:10730696 | Cone6ag1338 | Cone-Chr6:10778130 | 4.44E-209 | proximal | |
| Cone6ag1330 | Cone-Chr6:10730696 | Cone9ag1270 | Cone-Chr9:9492468 | 8.80E-221 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone6ag1330 | - | - | - | 0.0 |