Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag1330 ATGGCTGGAACTTCATCAATAGGCCTTTTGGAAATACTAGCAGCACTATTTTCCTTCATTTCTATTCTCCTTCTTAGAAGCTTAAGAAATACAAATGATCTTCCATGGAATTTCCCCTTTCTTGGAATGGTACCTACCATTATCCATCACTCTCACCGCATCCACGATCGTGCCACTGAATTGTTGCGTCTCTCCGGATGTAGTTTTCTGATAAAAGGGATTTGGTTTGCAAATCTCGACATGTTGCTCACAGCTGACCCTGCCAATATACACCACATAATGAGCGCAAACTTTGTGAATTTTCCAAAAGGGCCTGGATTCAAGTACATCTTTGACATTTTGGGAGATGGGATTTTCAATTCAGACGCGGACTTGTGGAAGGATCAAAGAAGAATAGCTCAAAAGTTGGTTAGTCACAAGCGCTTTTACCAATTCATGGTGAAGACAAGCAAGTATAAGGTGGAGAAAGGATTAGTTCCTATTCTTGATCATGTTTCCGAAAAAGGGCTTGTCATAGATTTTCAAGACTTGTTTCAAAGGTTTTCTTTTGATTCTACTTGTATGTTGGTTACTGGATTTGATCCCACTAGTCTTTCTATTGAATTTCCGGATGTTCCATTCTCTAAGGCCATGGATGATGCCGAGGAAGTGATATTTTACCGGCATTTCATTCCCAAAAGACTTTGGGAATTACAAAAGTTTCTAGGGTTTGGACTTGCAAAGAGGTTAGGAAATGCTTGGGAAACTATTGATGAAACTATTTCCGAACTTATTACTATGAAAAAGGCGAAGATTCACCGCCAAGTCGAACCGCAAGAGTTTGAAGAAGAAGGAGTTGATCTTATAGAATCATACATGAATGAAGATAAGAAATTATCGGACGATAAGTTCTTGAGAGATACAATCTTGAACTTTATGATTGCCGGTAGGGACACTACAAGCTCAGCTCTCTCCTGGTTTTTCTGGCTTATTTCGAAGAATCCATTAGTACTCATCAAGATAAGAGAGGAGCTTAAACAAGAAGTATTAACCCCAGCTAATGAAGCACATGAAAAATGGAGGGTTTTTGATATTGAAGAGGTAAACAAATTGGTTTACTTGCATGCAGCTTTATGCGAGTCTCTTCGGCTTTACCCTCCGGTTCCATTTCAACATAAGGAACCTGTCCAACCAGATATTCTTCCAAGTGGTCACCATGTGAGTCCTAAAATAAAGGTCTTATTCTCTATGTATGCATTGGGAAGGATGGAATCGGTATGGGGAAAAGATTGCGAGGAATTCAATCCAGAGAGGTGGATTTCTGTGAGCGGAAAGATCAAACACAAGCCCTCGTACAAGTTTATGGCTTTCAATGCCGGACCGAGGACTTGTTTGGGAAAAGAAGTGGCATTCACTCAAATGAAGTTGACTGTGGCAGCTATACTCCATAACTATGATGTTGAAGTAGTGGAAGGACAACATATTACTCCAAGTGCTTCCATTATTCTTCATATAAAGCATGGCTTGAAGATCAAGGTTACAAAACGATGGACTTGA 1536 39.91 MAGTSSIGLLEILAALFSFISILLLRSLRNTNDLPWNFPFLGMVPTIIHHSHRIHDRATELLRLSGCSFLIKGIWFANLDMLLTADPANIHHIMSANFVNFPKGPGFKYIFDILGDGIFNSDADLWKDQRRIAQKLVSHKRFYQFMVKTSKYKVEKGLVPILDHVSEKGLVIDFQDLFQRFSFDSTCMLVTGFDPTSLSIEFPDVPFSKAMDDAEEVIFYRHFIPKRLWELQKFLGFGLAKRLGNAWETIDETISELITMKKAKIHRQVEPQEFEEEGVDLIESYMNEDKKLSDDKFLRDTILNFMIAGRDTTSSALSWFFWLISKNPLVLIKIREELKQEVLTPANEAHEKWRVFDIEEVNKLVYLHAALCESLRLYPPVPFQHKEPVQPDILPSGHHVSPKIKVLFSMYALGRMESVWGKDCEEFNPERWISVSGKIKHKPSYKFMAFNAGPRTCLGKEVAFTQMKLTVAAILHNYDVEVVEGQHITPSASIILHIKHGLKIKVTKRWT 511
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 10730696 10732331 + Conep06aG0138500.1 Cone6ag1330 440214
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag1330 511 SUPERFAMILY Cytochrome P450 29 509 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone6ag1330 511 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone6ag1330 511 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone6ag1330 511 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone6ag1330 511 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone6ag1330 511 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone6ag1330 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cone6ag1330 511 PANTHER CYTOCHROME P450 23 502 - -
Cone6ag1330 511 Pfam Cytochrome P450 37 493 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone6ag1330 511 CDD CYP86A 69 502 - -
Cone6ag1330 511 Gene3D Cytochrome P450 31 509 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone6ag1330 511 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone6ag1330 511 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone6ag1330 511 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone6ag1330 511 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone6ag1330 Cone-Chr6:10730696 Cone6ag1339 Cone-Chr6:10790638 7.62E-222 dispersed
Cone6ag1322 Cone-Chr6:10675143 Cone6ag1330 Cone-Chr6:10730696 7.17E-212 proximal
Cone6ag1330 Cone-Chr6:10730696 Cone6ag1338 Cone-Chr6:10778130 4.44E-209 proximal
Cone6ag1330 Cone-Chr6:10730696 Cone9ag1270 Cone-Chr9:9492468 8.80E-221 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag1330 - - - 0.0