Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag1341 ATGGAGTTTGGTTTTGACAAAAAAGACCCAACCAGCTACTGCCTCTTTGCCACTTTTATTGGCTCCAAACCGCAGTTTCTAAACGATGGATATGACCTTTTCCTCTCTCTCCTCTTAGTCTTAACACTTTTCCTCCTCACTTGGGCTTTTTCCGTTGGCGGGACCGCATGGAAAAACGGAAGGGGGCGAAAAAACGGCGCCGTTTTAATTCCCGGACCACGTGGACTACCTATACTCGGCAGCCTTTTTACTGTCAGCCGTGGCTTGGCTCACCGGGCACTAGCTGCTATGGCATGGAGCCGAGATAACACTCAGCTCATGGCTTTCAGCCTCGGCTCGACTCCTGTAGTAGTGGCTTCTGACCCTCACACCGCACGTGAGATCTTGACGTCACCACACTTTGCTGACCGCCCGCTCAAACAGTCGGCCAAGAGCCTCATGTTTGGCCGAGCCATCGGCTTTGCGCCTAATGGTACATATTGGCGCCTGCTAAGGCGGATTGCTTCGACTCACCTCTTTTCACCAAAACGCATTTTAGCCCATGAAGCAGGTCGACTGCTAGAATGCGCTGTCATGCTGCGCAATATAGCAAAAGAACAAAAACATGAACAGACCGTACTCCTAAGAAAACATCTACAAGCTGCTTCGTTAAACAACATGATGGGGAGTGTGTTTGGAAAACGGTTCCACTCGGATCCGACTAACGTGGAGCTGGAGGAGGTCCAGAGTTTGGTTCGGGAAGGGTTTGAGCTTCTAGGTGCTTTTAATTGGTCAGACTATCTTCCATGGCTGAGCTGCTTCTACGACCCGGTTCGGGTCAACCATCGGTGCTCCGAACTGGTTCCTCGGGTCAGAAAACTGGTAAAAAGAATTATACAGGAGCACAGAGATCGCAATGGGTCCAAAAACGACGTGTCGGATGGAGATGACTTTGTTGACGTTTTGCTCCATTTGGAGGGTAACGAAAAGCTTGCAGAAGATGACATGATTGCTGTGCTATGGGAAATGATCTTTAGAGGGACTGATACAACGGCTCTATTAACCGAGTGGGTTATGGCCGAGTTAGTCTTAAACCAGCAAATTCAGCAAAACCTTCATAACGAAATCGCTAGTATTAGTAATAGTAATAATAACAAAAGCCACCTGACTGATGCTGACGTGGCCAAGCTGCCCTACTTACAGGCGGTGGTAAAGGAGACGCTGAGACTCCATCCACCCGGTCCACTGCTCTCATGGGCCCGTCTCTCCACGTCGGACGTCCACCTCAGCAACGGCATGCTTATCCCGGCAAACACAACCGCCATGGTCAACATGTGGGCAATCACACACGACCCTCGCGTGTGGGAAGCCCCACTTGAGTTCAGACCGGAGCGGTTCCTGCATGCTGACGTGGACGTGAGGGGGGGTGATCTAAGGCTTGCGCCGTTTGGGGCTGGGCGTAGGGTTTGTCCGGGGAAGAACCTTGGCCTGGTGACTGTGCACCTATGGGTGGCTGAGTTGGTGCACCGTTTTAAGTGGGTCCAAGATGACGTGGGTGGTCAAGCGGTTGACTTGAGCGAGGTTTTGAAGCTGTCTTGTGAGATGAAGTTTCCTCTTCGTGCTGTGGCTCTGCAAAGGCCTTGA 1623 51.45 MEFGFDKKDPTSYCLFATFIGSKPQFLNDGYDLFLSLLLVLTLFLLTWAFSVGGTAWKNGRGRKNGAVLIPGPRGLPILGSLFTVSRGLAHRALAAMAWSRDNTQLMAFSLGSTPVVVASDPHTAREILTSPHFADRPLKQSAKSLMFGRAIGFAPNGTYWRLLRRIASTHLFSPKRILAHEAGRLLECAVMLRNIAKEQKHEQTVLLRKHLQAASLNNMMGSVFGKRFHSDPTNVELEEVQSLVREGFELLGAFNWSDYLPWLSCFYDPVRVNHRCSELVPRVRKLVKRIIQEHRDRNGSKNDVSDGDDFVDVLLHLEGNEKLAEDDMIAVLWEMIFRGTDTTALLTEWVMAELVLNQQIQQNLHNEIASISNSNNNKSHLTDADVAKLPYLQAVVKETLRLHPPGPLLSWARLSTSDVHLSNGMLIPANTTAMVNMWAITHDPRVWEAPLEFRPERFLHADVDVRGGDLRLAPFGAGRRVCPGKNLGLVTVHLWVAELVHRFKWVQDDVGGQAVDLSEVLKLSCEMKFPLRAVALQRP 540
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 10811073 10812802 + Conep06aG0139600.1 Cone6ag1341 440225
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag1341 540 CDD CYP78 103 532 - -
Cone6ag1341 540 PANTHER CYTOCHROME P450 78A7-RELATED 25 535 IPR051996 -
Cone6ag1341 540 FunFam Cytochrome P450 78A5 62 539 - -
Cone6ag1341 540 SUPERFAMILY Cytochrome P450 70 539 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone6ag1341 540 PRINTS E-class P450 group I signature 437 461 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone6ag1341 540 PRINTS E-class P450 group I signature 100 119 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone6ag1341 540 PRINTS E-class P450 group I signature 348 374 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone6ag1341 540 PRINTS E-class P450 group I signature 394 412 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone6ag1341 540 PRINTS E-class P450 group I signature 483 506 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone6ag1341 540 PRINTS E-class P450 group I signature 215 233 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone6ag1341 540 PRINTS E-class P450 group I signature 473 483 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone6ag1341 540 PRINTS E-class P450 group I signature 328 345 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone6ag1341 540 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 476 485 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cone6ag1341 540 Pfam Cytochrome P450 71 508 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone6ag1341 540 Gene3D Cytochrome P450 58 534 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone6ag1341 540 PRINTS P450 superfamily signature 474 483 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone6ag1341 540 PRINTS P450 superfamily signature 339 356 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone6ag1341 540 PRINTS P450 superfamily signature 395 406 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone6ag1341 540 PRINTS P450 superfamily signature 483 494 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone6ag1341 Cone-Chr6:10811073 Cone9ag0534 Cone-Chr9:2552386 3.71E-157 dispersed
Cone6ag1341 Cone-Chr6:10811073 Cone7ag1429 Cone-Chr7:10161380 6.98E-231 wgd
Cone6ag1341 Cone-Chr6:10811073 Cone9ag1296 Cone-Chr9:9722159 0 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag1341 K20619 - rcu:8268221 740.339