Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone6ag1341 | ATGGAGTTTGGTTTTGACAAAAAAGACCCAACCAGCTACTGCCTCTTTGCCACTTTTATTGGCTCCAAACCGCAGTTTCTAAACGATGGATATGACCTTTTCCTCTCTCTCCTCTTAGTCTTAACACTTTTCCTCCTCACTTGGGCTTTTTCCGTTGGCGGGACCGCATGGAAAAACGGAAGGGGGCGAAAAAACGGCGCCGTTTTAATTCCCGGACCACGTGGACTACCTATACTCGGCAGCCTTTTTACTGTCAGCCGTGGCTTGGCTCACCGGGCACTAGCTGCTATGGCATGGAGCCGAGATAACACTCAGCTCATGGCTTTCAGCCTCGGCTCGACTCCTGTAGTAGTGGCTTCTGACCCTCACACCGCACGTGAGATCTTGACGTCACCACACTTTGCTGACCGCCCGCTCAAACAGTCGGCCAAGAGCCTCATGTTTGGCCGAGCCATCGGCTTTGCGCCTAATGGTACATATTGGCGCCTGCTAAGGCGGATTGCTTCGACTCACCTCTTTTCACCAAAACGCATTTTAGCCCATGAAGCAGGTCGACTGCTAGAATGCGCTGTCATGCTGCGCAATATAGCAAAAGAACAAAAACATGAACAGACCGTACTCCTAAGAAAACATCTACAAGCTGCTTCGTTAAACAACATGATGGGGAGTGTGTTTGGAAAACGGTTCCACTCGGATCCGACTAACGTGGAGCTGGAGGAGGTCCAGAGTTTGGTTCGGGAAGGGTTTGAGCTTCTAGGTGCTTTTAATTGGTCAGACTATCTTCCATGGCTGAGCTGCTTCTACGACCCGGTTCGGGTCAACCATCGGTGCTCCGAACTGGTTCCTCGGGTCAGAAAACTGGTAAAAAGAATTATACAGGAGCACAGAGATCGCAATGGGTCCAAAAACGACGTGTCGGATGGAGATGACTTTGTTGACGTTTTGCTCCATTTGGAGGGTAACGAAAAGCTTGCAGAAGATGACATGATTGCTGTGCTATGGGAAATGATCTTTAGAGGGACTGATACAACGGCTCTATTAACCGAGTGGGTTATGGCCGAGTTAGTCTTAAACCAGCAAATTCAGCAAAACCTTCATAACGAAATCGCTAGTATTAGTAATAGTAATAATAACAAAAGCCACCTGACTGATGCTGACGTGGCCAAGCTGCCCTACTTACAGGCGGTGGTAAAGGAGACGCTGAGACTCCATCCACCCGGTCCACTGCTCTCATGGGCCCGTCTCTCCACGTCGGACGTCCACCTCAGCAACGGCATGCTTATCCCGGCAAACACAACCGCCATGGTCAACATGTGGGCAATCACACACGACCCTCGCGTGTGGGAAGCCCCACTTGAGTTCAGACCGGAGCGGTTCCTGCATGCTGACGTGGACGTGAGGGGGGGTGATCTAAGGCTTGCGCCGTTTGGGGCTGGGCGTAGGGTTTGTCCGGGGAAGAACCTTGGCCTGGTGACTGTGCACCTATGGGTGGCTGAGTTGGTGCACCGTTTTAAGTGGGTCCAAGATGACGTGGGTGGTCAAGCGGTTGACTTGAGCGAGGTTTTGAAGCTGTCTTGTGAGATGAAGTTTCCTCTTCGTGCTGTGGCTCTGCAAAGGCCTTGA | 1623 | 51.45 | MEFGFDKKDPTSYCLFATFIGSKPQFLNDGYDLFLSLLLVLTLFLLTWAFSVGGTAWKNGRGRKNGAVLIPGPRGLPILGSLFTVSRGLAHRALAAMAWSRDNTQLMAFSLGSTPVVVASDPHTAREILTSPHFADRPLKQSAKSLMFGRAIGFAPNGTYWRLLRRIASTHLFSPKRILAHEAGRLLECAVMLRNIAKEQKHEQTVLLRKHLQAASLNNMMGSVFGKRFHSDPTNVELEEVQSLVREGFELLGAFNWSDYLPWLSCFYDPVRVNHRCSELVPRVRKLVKRIIQEHRDRNGSKNDVSDGDDFVDVLLHLEGNEKLAEDDMIAVLWEMIFRGTDTTALLTEWVMAELVLNQQIQQNLHNEIASISNSNNNKSHLTDADVAKLPYLQAVVKETLRLHPPGPLLSWARLSTSDVHLSNGMLIPANTTAMVNMWAITHDPRVWEAPLEFRPERFLHADVDVRGGDLRLAPFGAGRRVCPGKNLGLVTVHLWVAELVHRFKWVQDDVGGQAVDLSEVLKLSCEMKFPLRAVALQRP | 540 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 10811073 | 10812802 | + | Conep06aG0139600.1 | Cone6ag1341 | 440225 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone6ag1341 | 540 | CDD | CYP78 | 103 | 532 | - | - | |
| Cone6ag1341 | 540 | PANTHER | CYTOCHROME P450 78A7-RELATED | 25 | 535 | IPR051996 | - | |
| Cone6ag1341 | 540 | FunFam | Cytochrome P450 78A5 | 62 | 539 | - | - | |
| Cone6ag1341 | 540 | SUPERFAMILY | Cytochrome P450 | 70 | 539 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag1341 | 540 | PRINTS | E-class P450 group I signature | 437 | 461 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag1341 | 540 | PRINTS | E-class P450 group I signature | 100 | 119 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag1341 | 540 | PRINTS | E-class P450 group I signature | 348 | 374 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag1341 | 540 | PRINTS | E-class P450 group I signature | 394 | 412 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag1341 | 540 | PRINTS | E-class P450 group I signature | 483 | 506 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag1341 | 540 | PRINTS | E-class P450 group I signature | 215 | 233 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag1341 | 540 | PRINTS | E-class P450 group I signature | 473 | 483 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag1341 | 540 | PRINTS | E-class P450 group I signature | 328 | 345 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag1341 | 540 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 476 | 485 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cone6ag1341 | 540 | Pfam | Cytochrome P450 | 71 | 508 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag1341 | 540 | Gene3D | Cytochrome P450 | 58 | 534 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag1341 | 540 | PRINTS | P450 superfamily signature | 474 | 483 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag1341 | 540 | PRINTS | P450 superfamily signature | 339 | 356 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag1341 | 540 | PRINTS | P450 superfamily signature | 395 | 406 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag1341 | 540 | PRINTS | P450 superfamily signature | 483 | 494 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone6ag1341 | Cone-Chr6:10811073 | Cone9ag0534 | Cone-Chr9:2552386 | 3.71E-157 | dispersed | |
| Cone6ag1341 | Cone-Chr6:10811073 | Cone7ag1429 | Cone-Chr7:10161380 | 6.98E-231 | wgd | |
| Cone6ag1341 | Cone-Chr6:10811073 | Cone9ag1296 | Cone-Chr9:9722159 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone6ag1341 | K20619 | - | rcu:8268221 | 740.339 |