Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag1414 ATGGCCGTAGAGCTCATGATGGGTGGCGGTGGTTTTAGAGACGGTAATTTCTCATCATCATCATCATCATCAGCGAAGCTGGAGGAAAACGCCGTTAGAGAAGCGGCCTCCGGCCTTGAAAGCGTCGAGAGGCTAATCCGTTTGCTCTCTAACGCCACCACCCAGCAGGAAACGGAAAAGGACAAGAGCAAGAACAGGGACGACGATATGGAGATGGATTGTAAAGCCATGGCGGACGTCGCCGTTTCAAAGTTCAAACGGGTTATTTCTCTCCTGGGCCGTACCCGGGTCGGGCACGCCAGGTTCAGGCGCGCTCCTATCCCGTTTAGTGAGAGTCGCGACACGGCGCCTCTTTGTCCGATGCCTATCCAGCAGATCCCGCCGCCGCTTCCTTCTCCTTCTTCTTCGTCTTACCGTTCTTCTTCGAAAAACGGTGTGATTGAGAGGAAGGAATCGTTTAATAATACTACTACCATTAATTTCTCTTCCTACTCTTCTGCTCCCAACTCGTTCATGTCGTCTTTGACCGGAGATACGGACAGTAAGCAGCAGCAGTTGCCGTCGTCTTCGTCGGCCGCGTTTCAGATTACGAATCTGTCTCAGGTCTCCTCCGCCGGAAAGCCTCCTCTGTCTTCTTCTTCGTTGAAACGGAAGTGTAGCTCCGACAACATCGGATCCGGCAAGTGCAGTGGATCCCTAGGTCGCTGCCACTGTTCCAAGAAAAAAAAACTGAGATTAAAGAGGGTAGTAAGGGTTCCGGCAATAAGCTTGAAGCTTTCAGATATTCCACCTGACGATTATTCATGGCGAAAGTATGGACAGAAGCCCATTAAAGGATCTCCACATCCGAGGGGATATTATAAGTGCAGTAGTATGAGAGGATGTCCAGCTCGGAAACATGTAGAGAGAGCATTAGACGATGCATCGATGCTTGTAGTAACGTATGAAGGGGAGCACAATCACGCGCTCCTCTCTGTTCAAGAGACTTCTAATCTCATACTTGAATCTTCATAG 1014 50.0 MAVELMMGGGGFRDGNFSSSSSSSAKLEENAVREAASGLESVERLIRLLSNATTQQETEKDKSKNRDDDMEMDCKAMADVAVSKFKRVISLLGRTRVGHARFRRAPIPFSESRDTAPLCPMPIQQIPPPLPSPSSSSYRSSSKNGVIERKESFNNTTTINFSSYSSAPNSFMSSLTGDTDSKQQQLPSSSSAAFQITNLSQVSSAGKPPLSSSSLKRKCSSDNIGSGKCSGSLGRCHCSKKKKLRLKRVVRVPAISLKLSDIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERALDDASMLVVTYEGEHNHALLSVQETSNLILESS 337
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 11365253 11366874 - Conep06aG0147300.1 Cone6ag1414 440298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag1414 337 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 32 327 IPR044810 GO:0003700(InterPro)
Cone6ag1414 337 MobiDBLite consensus disorder prediction 203 226 - -
Cone6ag1414 337 Pfam Plant zinc cluster domain 216 261 IPR018872 -
Cone6ag1414 337 MobiDBLite consensus disorder prediction 108 151 - -
Cone6ag1414 337 SUPERFAMILY WRKY DNA-binding domain 261 322 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cone6ag1414 337 ProSiteProfiles WRKY domain profile. 258 324 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cone6ag1414 337 MobiDBLite consensus disorder prediction 14 28 - -
Cone6ag1414 337 FunFam WRKY transcription factor 65 247 324 - -
Cone6ag1414 337 Gene3D WRKY domain 248 323 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cone6ag1414 337 MobiDBLite consensus disorder prediction 8 29 - -
Cone6ag1414 337 Pfam WRKY DNA -binding domain 265 321 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cone6ag1414 337 SMART WRKY_cls 263 323 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cone6ag1414 337 MobiDBLite consensus disorder prediction 50 70 - -
Cone6ag1414 337 MobiDBLite consensus disorder prediction 135 151 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag0596 Cone-Chr17:3167378 Cone6ag1414 Cone-Chr6:11365253 1.71E-56 dispersed
Cone20ag0629 Cone-Chr20:3786118 Cone6ag1414 Cone-Chr6:11365253 4.59E-61 dispersed
Cone6ag1414 Cone-Chr6:11365253 Cone7ag1766 Cone-Chr7:11645922 2.34E-62 dispersed
Cone4ag1594 Cone-Chr4:12164332 Cone6ag1414 Cone-Chr6:11365253 2.16E-93 wgd
Cone6ag1414 Cone-Chr6:11365253 Cone7ag1354 Cone-Chr7:9836188 3.93E-99 wgd
Cone6ag1414 Cone-Chr6:11365253 Cone9ag1341 Cone-Chr9:10068119 3.72E-186 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
46398 PF00795 CN_hydrolase 1.50E-28 No_clan Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag1414 - - - 0.0