Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag1423 ATGGAGACTTGCACTTACCAGATCGCCTTCTCCTCCAAATCGCTTTCGCTTCATAATTGCAGAGCTAGAAAACGATTCTTCTCCACGCCTATTATTAGACCTATACGCCACGGTTCCCTCCCTTCTTCCTCTGTTCGAGTCAAAGTCAAACATTCTCATTCCCCCCTTGATTTTCTCCATTTCCGCCTCCGCCGCATCAATTGCCTCGCCGCCGCAGAGACCTCCGATCACGATCACGGTCACGAGCACCACAGTCACAGTCACAGTCATCATCACCACCACCACCACCATAGTCACCATAATTGCAATTGCGACGGTTCTGTTGAGCTGACTGGGCCTCAGAAGGCGCTGCTTCGATTTGCCAAAGCTATCAGGTGGATCGACTTGGCCAATTATCTACGGGAGAACTTACATCTGTGTTGTGGTTCCACGGCTTTGTTTCTAGCTGCAGCTGCTTGCCCTTATTTGGTGCCCAAACCTGCTGTTAAGCCTCTCCAAAATGCTTTCATTTCGATTGCTTTCCCTCTTGTTGGGGTGTCTGCATCTCTTGATGCTCTTACTGATATTGCTGGTGGGAAAGTAAATATCCATGTCCTGATGGCTCTTGCAGCATTTGCTTCCATCTTTATGGGGAACTCCTTAGAAGGAGGACTACTTCTTTCCATGTTCAACATGTCTCACATTGCTGAAGAGTATTTCACCAGCAGGTCAGTGATTGATGTGAAAGAGTTGAAAGATAACAATCCAGAATTCGCCCTTGTTCTCGATATGGATGATGATGAACTTCCTAATACTTCAGATTTGGCATACAAAAGGGTGCCTGTGCATGACGTAGAAGTGGGTTCATATCTCTTGGTTGGAGCTGGTGAGTCTGTGCCTGTAGATTGTGAAGTTTACCAAGGTAATGCTACAATTACTATTGAGCACCTGACAGGAGAAGTCAAACCACTAGAGATAAAATCTGGAGACAATGTTCCCGGTGGTGCAAGAAACTTGGATGGTAGGATAGTAGTGACGGCAACAAAGACATGGAAAGAGTCGACGCTGAGCAAGATTGTGCAGTTGACTGAAGAAGTACAATTGAATAAACCAAAGCTTCAAAGGTGGCTAGATGAGTTTGGGGAGAATTACAGCAAGGCGGTGATAGTCTTGTCCATTGCAATTGCGTTTCTCGGTCCATTGTTGTTTAAATGGCCATTTATTTCTACACCAGCTTGCAGAGGATCGGTGTACAGAGCACTGGGCCTCATGGTGGCAGCATCACCTTGTGCCCTCGCTGTGGCTCCATTGGTGTATGCAACTGCAATTAGTTCCTGTGCAAAAAGGGGGATATTGCTCAAAGGTGGGCACGTGCTTGATGCCCTTGCTTCTTGCCACACCATAGCATTTGATAAAACTGGGACTTTGACGACCGGTAGGCTTGTGTTCAAGGCAATTGAACCTATTTATGGACATAAGGACAGAGAAAACAAATCAAATTTCATTTCCTGTTGCATTCCCAGCTGTGAAAAAGAAGCTCTTGCTGTGGCAGCAGCCATGGAAAAGGGTACTACTCACCCAATTGGAAGAGCAGTGGTAAACCATAGTGCAGGGAAAGAACTTCCTTCTGTTTCAGTTGAAAGTTTTGAGTATTTTCCTGGTAGAGGTCTTGTTGCAACTCTGAACGTCCTCAAGTCGGGAACCAGAGAGGATAAACCTTTGGAAGCATCTCTTGGTTCTGTTGATTTCATTACTTCGCTTTGTAAATCTGAAAATGAATCAAAAAGAATCAAGGAAGCTGTGAATGAATCATCATACGGGGGGGAATTTGTACGTGCTGCTCTTTCGGTTGATAAAAAGGTAACACTGATTCACCTAGAGGATCAGCCTCGGCCTGGAGTCTTAGACGTCATAGTCGAATTACAACATCAAGCCAAACTCCGCATAATGATGTTGACAGGTGACCATAAATCAAGCGCATGGCGAGTTGCAAATGCAGTAGGAATTAAAGAAGTTTACTGCAGCCTAAAGCCTGAGGATAAGCTCAGTCGTGTGAAGGATATTTCGAGAGAGACAGGCGGAGGACTAATAATGGTGGGTGAAGGGATAAATGACGCACCAGCACTTGCTGCAGCAACGGTTGGAATAGTACTTGCTCAACGTGCAAGTGCAACAGCAATCGCTGTTGCTGACGTTCTGCTGCTTCGTAACAATATTTCCAGTGTATCCTTCTGTATTGCCAAATCTCGCCAGACAAACTCGCTGGTGAAACAAAATGTGGCCCTCGCTTTATCATCGATATTTCTGGCTTCTCTTCCATCCGTCTTAGGGTTTCTTCCCCTCTGGTTGACGGTACTTTTACACGAGGGTGGAACTCTTCTCGTTTGTCTAAACTCCATACGTGCCCTAAATGACCCTGTATGGTCATGGAGGCAGAAACTGTTGCTTCTTCTTAAGGATTTCAAAGCTGCAGTTCAAGTCTCAAGACCCGACAACAGCCCTACCGCTATTCAACAACCGGCATCTTTGTAA 2511 45.76 METCTYQIAFSSKSLSLHNCRARKRFFSTPIIRPIRHGSLPSSSVRVKVKHSHSPLDFLHFRLRRINCLAAAETSDHDHGHEHHSHSHSHHHHHHHHSHHNCNCDGSVELTGPQKALLRFAKAIRWIDLANYLRENLHLCCGSTALFLAAAACPYLVPKPAVKPLQNAFISIAFPLVGVSASLDALTDIAGGKVNIHVLMALAAFASIFMGNSLEGGLLLSMFNMSHIAEEYFTSRSVIDVKELKDNNPEFALVLDMDDDELPNTSDLAYKRVPVHDVEVGSYLLVGAGESVPVDCEVYQGNATITIEHLTGEVKPLEIKSGDNVPGGARNLDGRIVVTATKTWKESTLSKIVQLTEEVQLNKPKLQRWLDEFGENYSKAVIVLSIAIAFLGPLLFKWPFISTPACRGSVYRALGLMVAASPCALAVAPLVYATAISSCAKRGILLKGGHVLDALASCHTIAFDKTGTLTTGRLVFKAIEPIYGHKDRENKSNFISCCIPSCEKEALAVAAAMEKGTTHPIGRAVVNHSAGKELPSVSVESFEYFPGRGLVATLNVLKSGTREDKPLEASLGSVDFITSLCKSENESKRIKEAVNESSYGGEFVRAALSVDKKVTLIHLEDQPRPGVLDVIVELQHQAKLRIMMLTGDHKSSAWRVANAVGIKEVYCSLKPEDKLSRVKDISRETGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISSVSFCIAKSRQTNSLVKQNVALALSSIFLASLPSVLGFLPLWLTVLLHEGGTLLVCLNSIRALNDPVWSWRQKLLLLLKDFKAAVQVSRPDNSPTAIQQPASL 836
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 11416895 11422531 - Conep06aG0148200.1 Cone6ag1423 440307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag1423 836 Pfam haloacid dehalogenase-like hydrolase 460 705 - -
Cone6ag1423 836 CDD P-type_ATPase_HM 138 794 - -
Cone6ag1423 836 Gene3D - 473 623 IPR023299 GO:0000166(InterPro)
Cone6ag1423 836 Gene3D - 235 360 - -
Cone6ag1423 836 Pfam E1-E2 ATPase 269 442 - -
Cone6ag1423 836 NCBIfam heavy metal translocating P-type ATPase 196 794 IPR027256 GO:0006812(InterPro)|GO:0016020(InterPro)|GO:0019829(InterPro)
Cone6ag1423 836 SUPERFAMILY Calcium ATPase, transduction domain A 270 355 IPR008250 -
Cone6ag1423 836 MobiDBLite consensus disorder prediction 77 98 - -
Cone6ag1423 836 NCBIfam HAD-IC family P-type ATPase 588 772 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cone6ag1423 836 NCBIfam HAD-IC family P-type ATPase 270 483 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cone6ag1423 836 PRINTS P-type cation-transporting ATPase superfamily signature 638 648 - -
Cone6ag1423 836 PRINTS P-type cation-transporting ATPase superfamily signature 692 711 - -
Cone6ag1423 836 PRINTS P-type cation-transporting ATPase superfamily signature 716 728 - -
Cone6ag1423 836 PRINTS P-type cation-transporting ATPase superfamily signature 462 476 - -
Cone6ag1423 836 PRINTS P-type cation-transporting ATPase superfamily signature 615 626 - -
Cone6ag1423 836 SFLD C1.7: P-type atpase like 444 745 - -
Cone6ag1423 836 SUPERFAMILY HAD-like 460 792 IPR036412 -
Cone6ag1423 836 Gene3D - 455 743 IPR023214 -
Cone6ag1423 836 PANTHER PROBABLE CADMIUM/ZINC-TRANSPORTING ATPASE HMA1 55 821 IPR051949 -
Cone6ag1423 836 ProSitePatterns E1-E2 ATPases phosphorylation site. 464 470 IPR018303 -
Cone6ag1423 836 SFLD p-type atpase 444 745 IPR044492 -
Cone6ag1423 836 SUPERFAMILY Calcium ATPase, transmembrane domain M 198 774 IPR023298 -
Cone6ag1423 836 MobiDBLite consensus disorder prediction 84 98 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone6ag1423 Cone-Chr6:11416895 Cone9ag0775 Cone-Chr9:3710036 1.08E-42 dispersed
Cone16ag0144 Cone-Chr16:835660 Cone6ag1423 Cone-Chr6:11416895 1.39E-09 wgd
Cone6ag1423 Cone-Chr6:11416895 Cone9ag1350 Cone-Chr9:10126878 1.50E-182 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag1423 K01534 - mdm:103453726 1141.72