Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag1448 ATGAGCTGCAACGGTTGTAGAGTTCTTCGAAAAGGATGCAGCGAATCTTGTATTCTTCGTTCTTGTTTGCAGTGGATCGACAGCCCTGAATCGCAAGGTCATGCCACCGTCTTCGTCGCTAAGTTCTTCGGCCGTGCCGGACTCATGTCCTTTATCTCCGCCGTTCCTGAATCTCAACGACCTGCGTTATTCCAGTCTCTGTTATTCGAAGCGTGTGGACGGACGGTCAATCCGGTCAATGGAGCGGTAGGTCTTCTATGGACAGGCAACTGGCACGTGTGCCAGGCGGCGGTGGAGACGGTGCTCCGCGGCGGAGCGTTGCGTCCGATGCCGGAAATCTTCGCCGCCGTTGGATCTCCGACTCTAGCATCCGATGAAGCTTCAGAAGCGGAGGTAGCCTGTTCAGATCATATGTGGAAGTTTCGAGATCGGAATAATCCGAATTCTCGATTCTCTAATTCCCGATCTAGGATATCTACCAAGCACAAGCGATCTGATCAAGAACTTTCGAAACCGCAGCTGATTGATCTGGATCTACGCCTCACGCCGACCTTTCCTGTGAAGTTCTTGTCTCACGCGCTGGAGGTACGCCGGTCGGGGACCCCGTTGACAATGAATTCAGAGGAATCCGGCACCACCACGTGCTTTGAAAGCGGTTTCGCCGATCAGTACGCTCACCTAGGTGATCAAAAGCTTTTGAACTTGTTCACTTGA 714 52.66 MSCNGCRVLRKGCSESCILRSCLQWIDSPESQGHATVFVAKFFGRAGLMSFISAVPESQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGALRPMPEIFAAVGSPTLASDEASEAEVACSDHMWKFRDRNNPNSRFSNSRSRISTKHKRSDQELSKPQLIDLDLRLTPTFPVKFLSHALEVRRSGTPLTMNSEESGTTTCFESGFADQYAHLGDQKLLNLFT 237
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 11584182 11585464 - Conep06aG0150700.1 Cone6ag1448 440332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag1448 237 Pfam Lateral organ boundaries (LOB) domain 2 100 IPR004883 -
Cone6ag1448 237 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Cone6ag1448 237 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 236 - GO:0010468(PANTHER)
Cone6ag1448 237 MobiDBLite consensus disorder prediction 145 169 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone19ag0834 Cone-Chr19:6592100 Cone6ag1448 Cone-Chr6:11584182 2.47E-45 dispersed
Cone6ag1448 Cone-Chr6:11584182 Cone9ag1373 Cone-Chr9:10279555 4.50E-151 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
46400 PF00026 Asp 9.90E-107 CL0129 Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag1448 - - - 0.0