Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag1454 ATGAAGAGGAAATCTCTTGGATTCATCTTTTTTTTCATTCTCTCGATATCGGCCCCATTCTCGATCAAATCAATCCCAATTACATTCAGTTCCGCCATTAATGATTCTACTGCTTCTACTACCACCATTTCGAGTAGACCTAGAAGAATTCTTCACCAGCCACTTTTTCCCGTAACCTCCACTCCACCGCCGTACTCCGACCCCGAGCCGCCACCGCCACCGCCACCAGACTCTTCTTCTTCTTCTTCTTCTTCTTCGAGTTTAGAACCTCCGCCTTTCTTCAATGAACAGCCTACAGGTCCGACTCCAGATCAGAGCCGACCAACTCCTTCTCTTAATTCCAATGGAACTATGCCGATTCCAGCTGCGACGCCACCGTCGAAGCCGACGAAAACGGTAGCCGTCGCAATCTCAGTCGTAATCGTCACTCTTGGAATGCTCTCTGCTCTCGCATTCTTTCTCTATCGCCACCGCTCGAAGCATCCGGCTGAGACAGAAAAGCTAGTCGGAGGAGGGGGAGGAGATAGCAACAGCATCAACAATTCGCAGAGATTTTCAGAAGATCCTAGAGTTCCGCCTTCGAGCTTCCTCTACATTGGAACTGTTGAACCGAGTCAGAGCTCAGTCGTCGAGCAGAGCGGTGTGAACGCAACTGCTAACAGTTCGCCTGATCGCAAACTGAATTCGGTTAAAAGATCTTCGGATCGGTACCGTCCTAGTCCGGAACTGCAGCCATTGCCGCCGTTACCTCATCCGCCAGTGATAGATTCTCCGTCGGAGATTTCTTCGTCGGAAGAAGAGTACGAGGAAAGTCACTATACGGCATTTTATACTCCTCAGGCTTCGTCGTTGGTTAGTTATGACGACAGTTTTCACTCGCCGGCTTCGCGCCTGAACAATCCAGTTCACAGTAGTTACAGTGTACCTGCAAGAATCGACTCTCATTTTAACAGCAACAATAATGTTCCTTCTGTTCCTCATTCCAAAAGAACTTCACCAAAATCACGGCTCTATGTTTCAACGACAAAGCAGACTCAGCCTACACCGCCACCTCCCCCTCCTCCTCAGGCAACGAGACTACAGCCACATCAAATCCAGACTACTCAATCAACGATATCTTCATCTCCTCCAAGAAGGCCGAAATTTTCATCTCCACCTCCCCCACCTAATTTGGCGCTTCTTCAATCAATAAGCAATCGATCGGTGGGGGCTCCGCCACCGCCGCCGCCGCCTCCACCATCACTATCGATACCTGGGAGAGTAAAGCCTTCAGATTCAAATGTTTCTACAATGCCTAGACAATTTTTGTCTGAGCCAAAATTTCCAGTTCCTACAAGGCCAAAAGCTGATTCTATCTCTCGTTCTGGGACTTCAAATTCAGTTGAAGCTGTAGAAAACCCAAATTCTGAAGAGAAGCATGATGGAGAAGGAGAGAGACCCAGATTGAAGCCTCTGCACTGGGACAAAGTGCGAGCAACTTCAGACCGAGCCACAGTTTGGGACCAACTTAAGTCGAGCTCATTTCAATTGAACGAGGACATGATGGAGACTCTGTTCTGCTTCAACTCTGCAAATCCAGCCCCAAAAGAGGTAACTAGAAAATCTGTTCTGCCTCCGGTTGAAAAAGAAAACAGAGTGTTAGATCCGAAGAAGTCGCAAAACATTGCGATTCTGTTAAGAGCATTGAATGTGAGTCGTGAAGAGGTGACTGAATCTCTTTTAGATGGAAACCCAGAAGGCTTGGGTCCCGAGCTATTGGAAACTCTTGTAAAGATGGCTCCAACCAAAGAGGAAGAGATTAAACTCCGAGACTACCATGGTGATGTCTCAAAACTAGGATCCGCAGAACGATTTCTCAAGGCAGTTCTTGATATTCCATTTGCCTTTAAAAGAGTTGAAGCCATGCTATACCGTGCCAACTTTGATACAGAACTGAAATACCTCAGGAATTGTTTTGAAAGCCTAGAGGCAGCAAGTGGAGAATTAAAGAACAGCCGACTATTCCTTGCACTCCTTGAGGCTGTTCTTAGAACAGGAAATAGAATGAATGTTGGCACCAATAGAGGAGATGCTAAAGCATTCAAACTAGACACTCTTTTAAAACTGGTTGATATAAAGGGGACAGATGGAAAGACTACACTGCTCCATTTTGTTGTCCAGGAAATTATTCGATCTGAAGGTGTAGGTACAAACGAAAACAATCAAATCGAAACCCAAGCAAAAATGAAAGACGATGATTTCAACAAGCAAGGATTGCAGATTGTGTCTGGATTAAGCAGAGACTTAGTCAATGTGAAAAAAGCAGCTGGAATGGATTCTGATGTCTTAAGCAGTTATGTCTCTAAGCTTGAAATTGGGCTTGAGAAAGTCAGTTTGATCTTGCAGTATGAGAAAATTCCGGACGGGGAGGGGAAGTTCTTTAACTCAATGAAACTGTTTTTAAAGGAGGCTGAAGAAGAGATGACAAGGATCAAGGCTGATGAGAAAAAGGCTTTATCACTTGTCAAAGGGGTGACGGAATATTTTCATGGTAATGCAGCAAAGGAAGAAGCACATCCGTTTCGGATTTTTATGATCGTAAGAGATTTTCTTTCCATTTTGGACCAAGTTTGTAAGGAAGTTGGGAGAATGCAAGGGAGGACAGTAGTGGGTTCTGCTCGGTCCTTTCGTATTTCTTCAACTGCTTCACTTCCAGTTCTTAATAGGTATAATGTGAGACAAGCCAGAAGTTCAGATGAGGAAAGCTCATCATCTCCATGA 2760 45.33 MKRKSLGFIFFFILSISAPFSIKSIPITFSSAINDSTASTTTISSRPRRILHQPLFPVTSTPPPYSDPEPPPPPPPDSSSSSSSSSSLEPPPFFNEQPTGPTPDQSRPTPSLNSNGTMPIPAATPPSKPTKTVAVAISVVIVTLGMLSALAFFLYRHRSKHPAETEKLVGGGGGDSNSINNSQRFSEDPRVPPSSFLYIGTVEPSQSSVVEQSGVNATANSSPDRKLNSVKRSSDRYRPSPELQPLPPLPHPPVIDSPSEISSSEEEYEESHYTAFYTPQASSLVSYDDSFHSPASRLNNPVHSSYSVPARIDSHFNSNNNVPSVPHSKRTSPKSRLYVSTTKQTQPTPPPPPPPQATRLQPHQIQTTQSTISSSPPRRPKFSSPPPPPNLALLQSISNRSVGAPPPPPPPPPSLSIPGRVKPSDSNVSTMPRQFLSEPKFPVPTRPKADSISRSGTSNSVEAVENPNSEEKHDGEGERPRLKPLHWDKVRATSDRATVWDQLKSSSFQLNEDMMETLFCFNSANPAPKEVTRKSVLPPVEKENRVLDPKKSQNIAILLRALNVSREEVTESLLDGNPEGLGPELLETLVKMAPTKEEEIKLRDYHGDVSKLGSAERFLKAVLDIPFAFKRVEAMLYRANFDTELKYLRNCFESLEAASGELKNSRLFLALLEAVLRTGNRMNVGTNRGDAKAFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIRSEGVGTNENNQIETQAKMKDDDFNKQGLQIVSGLSRDLVNVKKAAGMDSDVLSSYVSKLEIGLEKVSLILQYEKIPDGEGKFFNSMKLFLKEAEEEMTRIKADEKKALSLVKGVTEYFHGNAAKEEAHPFRIFMIVRDFLSILDQVCKEVGRMQGRTVVGSARSFRISSTASLPVLNRYNVRQARSSDEESSSSP 919
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 11632679 11636975 + Conep06aG0151300.1 Cone6ag1454 440338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag1454 919 Coils Coil 814 834 - -
Cone6ag1454 919 MobiDBLite consensus disorder prediction 345 359 - -
Cone6ag1454 919 MobiDBLite consensus disorder prediction 360 378 - -
Cone6ag1454 919 MobiDBLite consensus disorder prediction 199 227 - -
Cone6ag1454 919 MobiDBLite consensus disorder prediction 174 189 - -
Cone6ag1454 919 MobiDBLite consensus disorder prediction 286 481 - -
Cone6ag1454 919 ProSiteProfiles Formin homology-2 (FH2) domain profile. 472 893 IPR015425 -
Cone6ag1454 919 Gene3D Formin, FH2 domain 480 887 IPR042201 -
Cone6ag1454 919 MobiDBLite consensus disorder prediction 450 465 - -
Cone6ag1454 919 MobiDBLite consensus disorder prediction 466 481 - -
Cone6ag1454 919 MobiDBLite consensus disorder prediction 420 434 - -
Cone6ag1454 919 MobiDBLite consensus disorder prediction 164 273 - -
Cone6ag1454 919 MobiDBLite consensus disorder prediction 241 255 - -
Cone6ag1454 919 SUPERFAMILY Formin homology 2 domain (FH2 domain) 405 878 - -
Cone6ag1454 919 Pfam Formin Homology 2 Domain 479 867 IPR015425 -
Cone6ag1454 919 PANTHER FORMIN-RELATED 29 913 IPR027643 GO:0003779(InterPro)|GO:0030036(InterPro)|GO:0045010(InterPro)|GO:0051015(InterPro)
Cone6ag1454 919 MobiDBLite consensus disorder prediction 402 418 - -
Cone6ag1454 919 MobiDBLite consensus disorder prediction 37 130 - -
Cone6ag1454 919 SMART it6_source 472 882 IPR015425 -
Cone6ag1454 919 MobiDBLite consensus disorder prediction 286 344 - -
Cone6ag1454 919 MobiDBLite consensus disorder prediction 80 121 - -
Cone6ag1454 919 MobiDBLite consensus disorder prediction 57 79 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag0812 Cone-Chr4:5157281 Cone6ag1454 Cone-Chr6:11632679 8.06E-156 dispersed
Cone6ag1454 Cone-Chr6:11632679 Cone7ag0764 Cone-Chr7:4752804 1.19E-155 dispersed
Cone6ag1454 Cone-Chr6:11632679 Cone9ag1375 Cone-Chr9:10297335 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag1454 K28090 - csv:101208011 919.457