Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag1459 ATGGGGAAGAAGCAGCACAGCAAAGACCGGATGTTCATAACGAAGACGGAGTGGGCAACCGAATGGGGCGGCGCTAAATCCAAAGAGATTCACACTCCGTTCAAGCGCCTCCCCTTCTATTGCTGCTCGCTCACATTTACGCCATTTGAGGATCCTGTTTGCATCAGCGATGGCAGCGTCTTCGATATCACGAATATAATGCCGTATATAAGGAAGTATGGGAAAAGTCCAGTTACAGGTGCTCCTCTGAAAATGGAGGATCTCATTCCATTAACTTTCCACAAGAATTCTGAAGAATTTACGCACATAGTTGCCGTGAAGACTACCGGAAATGTGTTCTGCTACGAGGCAATTAAAGAGTTGAATATCAAAACGAAAAACTGGAAAGAGCTCCTCACAGACGAACCATTTACTCGTGAAGACCTCATAACAATTCAGAATCCTAATGCTCTTGATAGTAAGGCTCTCCTAGATTTTGATCATGTAAAACATAGTCTGAAACTAGACGATGAAGATCTGAAGAAATCGAGCTCAGATCCTACTCATAACATAAATGTAGCGGGAGATATCAAGCATATGCTAGAGGAACTAGGAACAGAAAAAGGGAGGGAAACTGCACTTCTTGGAGGAGGTGGTAGTAAAGCACGGAAAGAAAGAGCAGCTGCACTTGAAGCCATATTAGCTGCAAGGTCACGCATTAAAGAGGATTCTAATTCAAATGGAGGGGCCAAAGCCACTCAGGCTTACAGTATAGTAGATGCTGCATCTGCTTCAGTTCATGGAAGAAGTGCAGCTGCTGCAAAATCAGGCTCGAGTGATAAAACCGCTGCTCGTATAGCCATGCACATGGCTGGTGAAAGAGCGCCCATTAATGCAAAGATGGTACAGAGTCGATTTACTACGGGTGCTGCTTCCAGGTCCTTTACTTCCACGTCATACGACCCTGTTACTAAAAACGACTTTGAATACGTAAAAGTTGAGAAAAATCCAAAGAAGAAAGGATATGTTCAGCTTCATACGACACATGGAGATTTGAATATAGAGCTGCATTGTGATATAACTCCTAGAGCATGTGAGAATTTTGTAACCCTATGTGAACGCGGATACTACAATGGAGTATCTTTTCATAGAAGCATTCGGAATTTTATGATTCAAGGTGGCGACCCAACCGGAACAGGGAGGGGTGGAGAATCTATATGGGGAAAGCCTTTCAAAGATGAAGTCAACTCCAAGTTGCTTCACTCCGGAAGAGGAGTTGTCAGTATGGCAAATAGTGGGCCCCACACAAATGGGTCCCAGTTCTTTATCCTCTATAAGTCGGCAAATCACTTGAACTTTAAGCATACAGTCTTTGGTGGTGTTGTGGGTGGCATGACCACTCTAGCTACAATGGAAAAAGTTCCCGTTGATGATGATGATCGACCTCTGGATGAGATTAAGATAACAAGTGTGACAGTTTTCGTCAATCCTTACACTGAGCCTGATGAAGAAGAGAAAGAAAAAGAAAAAGATGAGAAGAATGTAGCGGATGAAGAAAATGAGAAGGTTGGATCATGGTATAGTAATCCTTGTACCGGAGCAGCTGACGTAGGAGGTGGTGGTGTTGGTGTTGGAAAATACTTGAAATCTAGTAGTACTCAGGCCGATAATACTACTCCGACTGCAATGTCTGTAACAAAGAAGAGAAAACTAGGAGTCTCATCACCAGAATTTAAAGACTTCTCTTCATGGTAA 1734 43.19 MGKKQHSKDRMFITKTEWATEWGGAKSKEIHTPFKRLPFYCCSLTFTPFEDPVCISDGSVFDITNIMPYIRKYGKSPVTGAPLKMEDLIPLTFHKNSEEFTHIVAVKTTGNVFCYEAIKELNIKTKNWKELLTDEPFTREDLITIQNPNALDSKALLDFDHVKHSLKLDDEDLKKSSSDPTHNINVAGDIKHMLEELGTEKGRETALLGGGGSKARKERAAALEAILAARSRIKEDSNSNGGAKATQAYSIVDAASASVHGRSAAAAKSGSSDKTAARIAMHMAGERAPINAKMVQSRFTTGAASRSFTSTSYDPVTKNDFEYVKVEKNPKKKGYVQLHTTHGDLNIELHCDITPRACENFVTLCERGYYNGVSFHRSIRNFMIQGGDPTGTGRGGESIWGKPFKDEVNSKLLHSGRGVVSMANSGPHTNGSQFFILYKSANHLNFKHTVFGGVVGGMTTLATMEKVPVDDDDRPLDEIKITSVTVFVNPYTEPDEEEKEKEKDEKNVADEENEKVGSWYSNPCTGAADVGGGGVGVGKYLKSSSTQADNTTPTAMSVTKKRKLGVSSPEFKDFSSW 577
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 11655955 11659118 - Conep06aG0151800.1 Cone6ag1459 440343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag1459 577 SUPERFAMILY Cyclophilin-like 335 502 IPR029000 -
Cone6ag1459 577 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 339 486 IPR002130 GO:0000413(InterPro)|GO:0003755(InterPro)
Cone6ag1459 577 FunFam Peptidyl-prolyl cis-trans isomerase cyp65 316 500 - -
Cone6ag1459 577 Pfam U-box domain 39 91 IPR003613 GO:0004842(InterPro)|GO:0016567(InterPro)
Cone6ag1459 577 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 326 492 IPR044666 GO:0000209(PANTHER)|GO:0061630(PANTHER)|GO:0071013(PANTHER)
Cone6ag1459 577 CDD cyclophilin_RING 335 493 - -
Cone6ag1459 577 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 335 486 IPR002130 GO:0000413(InterPro)|GO:0003755(InterPro)
Cone6ag1459 577 MobiDBLite consensus disorder prediction 536 577 - -
Cone6ag1459 577 FunFam Peptidyl-prolyl cis-trans isomerase 2 41 96 - -
Cone6ag1459 577 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 40 96 IPR013083 -
Cone6ag1459 577 ProSiteProfiles U-box domain profile. 35 108 IPR003613 GO:0004842(InterPro)|GO:0016567(InterPro)
Cone6ag1459 577 SMART Ubox_2 39 101 IPR003613 GO:0004842(InterPro)|GO:0016567(InterPro)
Cone6ag1459 577 Gene3D - 316 500 IPR029000 -
Cone6ag1459 577 MobiDBLite consensus disorder prediction 492 513 - -
Cone6ag1459 577 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 370 387 IPR020892 GO:0003755(InterPro)|GO:0006457(InterPro)
Cone6ag1459 577 CDD RING-Ubox_PPIL2 38 98 IPR026951 -
Cone6ag1459 577 MobiDBLite consensus disorder prediction 540 558 - -
Cone6ag1459 577 SUPERFAMILY RING/U-box 37 97 - -
Cone6ag1459 577 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 446 461 IPR002130 GO:0000413(InterPro)|GO:0003755(InterPro)
Cone6ag1459 577 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 418 433 IPR002130 GO:0000413(InterPro)|GO:0003755(InterPro)
Cone6ag1459 577 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 433 445 IPR002130 GO:0000413(InterPro)|GO:0003755(InterPro)
Cone6ag1459 577 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 375 387 IPR002130 GO:0000413(InterPro)|GO:0003755(InterPro)
Cone6ag1459 577 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 349 364 IPR002130 GO:0000413(InterPro)|GO:0003755(InterPro)
Cone6ag1459 577 MobiDBLite consensus disorder prediction 491 523 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone3ag0170 Cone-Chr3:915157 Cone6ag1459 Cone-Chr6:11655955 4.97E-51 dispersed
Cone4ag1675 Cone-Chr4:12533653 Cone6ag1459 Cone-Chr6:11655955 4.72E-43 dispersed
Cone6ag1459 Cone-Chr6:11655955 Cone8ag1267 Cone-Chr8:10492642 6.58E-33 dispersed
Cone11ag0391 Cone-Chr11:1927903 Cone6ag1459 Cone-Chr6:11655955 1.14E-57 transposed
Cone6ag1459 Cone-Chr6:11655955 Cone9ag1380 Cone-Chr9:10325393 9.29E-241 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag1459 K10598 - gmx:100819923 913.679