Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone6ag1463 | ATGGAGAGGTTTCTGGATGAGGATTTTGCGGCGGTGAAGCCGAAGCATTCGTCGGAGGAAGGGTTGCAGAACTGGAGGAAGCTATGTGGAATCGTCAAGAACAAAAAACGCAGGTTCCGTTTCACTGCTAATCTTTCCAAGCGTATGGAAGCTGCTACTATGCGCCAGAACAACCTGGAGAAGTTGAGGGTTGCTGTCCTGGTCTCAAAAGCCGCATTCCAATTTATCCAAGGTGTCCAACTAAGCGACTATGTCGTCCCAGAGCCAGTGAAAGCTGCAGGTTTTCAAATCTGTGCTGACGAACTCAGCTCAATCGTAGAAAGCCGCGATCAAAAGAAGCTCAAATTTCATGGCGGGGTCCATGGAATAGCAGAAAAGCTCTCCACATCTACAACAAAGGGGCTTAGTACTGATATCAATGCACTGAATCGTAGGGAAGAAATCTATGGAGCCAATAAATTCACTGAGAGTGAAACTAGGAGTTTCTTGGTATTTGTTTGGGAAGCCCTTCAAGACATGACTCTAATGATTCTAGGAGCCTGCGCCTTTGTTTCCCTGATTGTCGGAATCTTAACAGAAGGCTGGCCCCACGGGGCCCACGATGGGCTCGGGATTGTTTCCAGCATCTTACTGGTTGTGTTTGTAACAGCAACTAGTGATTATAGACAATCCTTACAGTTCAAGGATTTGGACAAGGAGAAGAAGAAGATCTCTGTTCAGGTCACAAGAAATGGATATAGGCAGAAACTATCTGTTTATGATTTACTCCCAGGAGATATTGTTCATCTCTTTATAGGAGACCAAGTACCTGCAGATGGGCTATTTATTTCGGGATTTTCAGTGTTAATCGATGAGTCAAGTTTAACGGGAGAAAGTGAGCCAGTAAGGGCAACTACTGAAAGCCCTTTTCTTCTTTCCGGAACTAAAGTTCAAGACGGATCATGTATGATGTTAGTCACTACAGTTGGGATGAGAACCCAATGGGGCAAATTAATGGCTACTCTAAGTGAAGGCGGAGATGATGAAACTCCATTACAAGTGAAACTAAACGGAGTAGCAACTATTATTGGCAAAATAGGTCTTTTATTTGCAGTTGTCACTTTTGCCGTTTTGGTTCAAGGGCTAGTTAGCCGGAAATTCCAAGATGGGACCCTCTGGTGTTGGTCCGTAGATGACGCAATGGCAATGTTGGAATTCTTTGCCGTTGCTGTTACAATTGTTGTGGTTGCTGTTCCAGAAGGGCTTCCATTAGCTGTTACATTAAGTCTTGCCTTTGCCATGAAGAAGATGATGAATGATAAAGCTCTTGTTCGCCATCTTGCAGCTTGTGAAACTATGGGGTCCGCCACAAGTATTTGCAGTGATAAGACCGGTACCCTCACTACAAATCATATGACAGTAGTAAAATCATGTATTGGAACGAATGTCCAGGAAGTGGACAATAAAACCAATAATAAGTCTTGTTCCGATTTATATTCTGACTTACCCGATTCTACTCTGCAGCTTCTTCTCCAATCGATTTTTAACAACACGGGAGGAGAAGTTGTTGTAAATAAAGATGGTAAGCTGGAGATATTAGGTACACCTACTGAAACTGCTTTGCTAGAGTTCGGGCTTGCAGTAGGGGGAGACTTTCAGGCCGAGAGAAAAGCAGTTAAAATGGTTAAGGTAGAGCCGTTTAACTCTTCAAAGAAACGTATGGGGGTAGTGATAGAATTGCCCGGAGGTAATAGTCGGGCTCACACTAAAGGTGCTTCTGAAATTATACTGGCCGATTGTGAGAAGGTGGTTAATTCAAAGGGTGAGATTGTTCCCTTGGATGACTTGTCCATGAGCCATTTAACAGAGACTATTAATCAATTTGCTAGTGAAGCTCTGCGAACTCTATGCCTTGCTTATATGGAGCTTGAAGATGGATTTTCTACTGATAAACCAATTCCAGTTTCTGGGTATACCTGTATAGGAATTGTGGGTATTAAAGATCCTGTTCGCCCGGGTGTCAAGGAATCTGTTGCAGTTTGTCGTTCAGCTGGTATTACTGTCCGAATGGTTACGGGTGATAATATCAATACTGCTAAGGCCATTGCTAGAGAATGTGGGATTCTTACTGATGATGGTATAGCCATTGAGGGGCCTGATTTCAGGGAGAAAAGTCAGGAAGAAATGCTTGAACTTATTCCGAAAATTCAGGTGATGGCTCGCTCTTCACCACTTGATAAGCATTTAATGGTGAAGCAATTGAGGACCACATTTGATGAGGTGGTTGCTGTAACTGGAGATGGAACAAACGATGCTCCAGCTCTTCACGAAGCTGATATTGGACTGGCAATGGGAATTGCCGGAACAGAGGTTGCTAAAGAGAGTGCTGATGTCATCATTTTGGATGATAATTTCTCCACTATAGTAACAGTAGGGAGATGGGGCCGTTCAGTCTACGTGAACATTCAAAAATTCGTACAGTTCCAGCTAACTGTTAACATCGTTGCTCTTATTGTCAACTTCACTTCAGCCTGTTTGACTGGTAAGGCTCCTCTTACAGCAGTCCAGCTTTTGTGGGTCAACATGATAATGGACACTCTAGGTGCATTAGCTCTTGCTACCGAGCCTCCAAATGACAGCTTAATGAAACGTCCCCCGGTTGGAAGAAGAGGAAACTTTATCAGTAATGTCATGTGGAGGAACATCTTAGGCCAATCCATGTACCAGTTATTGGTTCTATGGCTTCTTCAAGCAAAAGGCAAAATGATTTTCCATCTCGAAGGCCCGGATTCTGATCTTGTCCTCAATACACTTGTTTTCAACTCGTTCGTGTTTTGTCAGCTTTTCAACGAGATAAACTCCCGGGAAATGGAGAAAATCAATGTCTTCGAAGGCATTATGGATAACTACGTGTTTGTGAGTGTACTCGGTTCCACTCTGTTCTTTCAGATCATAATCGTCGAGTATTTGGGAACTTTTGCTAACACTACGCCGTTGACTTTAGTTCAATGGCTTGTTAGTGTGTTTATTGGGTTTATAGGGATGCCTATTGCTGCTTGGTTAAAGACAGTCCATGTATAA | 3060 | 43.24 | MERFLDEDFAAVKPKHSSEEGLQNWRKLCGIVKNKKRRFRFTANLSKRMEAATMRQNNLEKLRVAVLVSKAAFQFIQGVQLSDYVVPEPVKAAGFQICADELSSIVESRDQKKLKFHGGVHGIAEKLSTSTTKGLSTDINALNRREEIYGANKFTESETRSFLVFVWEALQDMTLMILGACAFVSLIVGILTEGWPHGAHDGLGIVSSILLVVFVTATSDYRQSLQFKDLDKEKKKISVQVTRNGYRQKLSVYDLLPGDIVHLFIGDQVPADGLFISGFSVLIDESSLTGESEPVRATTESPFLLSGTKVQDGSCMMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLLFAVVTFAVLVQGLVSRKFQDGTLWCWSVDDAMAMLEFFAVAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVVKSCIGTNVQEVDNKTNNKSCSDLYSDLPDSTLQLLLQSIFNNTGGEVVVNKDGKLEILGTPTETALLEFGLAVGGDFQAERKAVKMVKVEPFNSSKKRMGVVIELPGGNSRAHTKGASEIILADCEKVVNSKGEIVPLDDLSMSHLTETINQFASEALRTLCLAYMELEDGFSTDKPIPVSGYTCIGIVGIKDPVRPGVKESVAVCRSAGITVRMVTGDNINTAKAIARECGILTDDGIAIEGPDFREKSQEEMLELIPKIQVMARSSPLDKHLMVKQLRTTFDEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVGRWGRSVYVNIQKFVQFQLTVNIVALIVNFTSACLTGKAPLTAVQLLWVNMIMDTLGALALATEPPNDSLMKRPPVGRRGNFISNVMWRNILGQSMYQLLVLWLLQAKGKMIFHLEGPDSDLVLNTLVFNSFVFCQLFNEINSREMEKINVFEGIMDNYVFVSVLGSTLFFQIIIVEYLGTFANTTPLTLVQWLVSVFIGFIGMPIAAWLKTVHV | 1019 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 11673578 | 11677922 | + | Conep06aG0152200.1 | Cone6ag1463 | 440347 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone6ag1463 | 1019 | Gene3D | - | 168 | 1015 | - | - | |
| Cone6ag1463 | 1019 | NCBIfam | HAD-IC family P-type ATPase | 386 | 495 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Cone6ag1463 | 1019 | NCBIfam | HAD-IC family P-type ATPase | 728 | 840 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Cone6ag1463 | 1019 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 455 | 461 | IPR018303 | - | |
| Cone6ag1463 | 1019 | PRINTS | H+-transporting ATPase (proton pump) signature | 758 | 774 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Cone6ag1463 | 1019 | PRINTS | H+-transporting ATPase (proton pump) signature | 790 | 815 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Cone6ag1463 | 1019 | PRINTS | H+-transporting ATPase (proton pump) signature | 614 | 632 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Cone6ag1463 | 1019 | Pfam | Cation transporting ATPase, C-terminus | 843 | 1016 | IPR006068 | - | |
| Cone6ag1463 | 1019 | SFLD | p-type atpase | 435 | 810 | IPR044492 | - | |
| Cone6ag1463 | 1019 | FunFam | Calcium-transporting ATPase | 775 | 1019 | - | - | |
| Cone6ag1463 | 1019 | Gene3D | - | 17 | 77 | - | - | |
| Cone6ag1463 | 1019 | Pfam | Cation transporter/ATPase, N-terminus | 117 | 185 | IPR004014 | - | |
| Cone6ag1463 | 1019 | SMART | Cation_ATPase_N_a_2 | 119 | 190 | IPR004014 | - | |
| Cone6ag1463 | 1019 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 459 | 667 | IPR023299 | GO:0000166(InterPro) | |
| Cone6ag1463 | 1019 | FunFam | Calcium-transporting ATPase | 463 | 662 | - | - | |
| Cone6ag1463 | 1019 | Pfam | haloacid dehalogenase-like hydrolase | 636 | 772 | - | - | |
| Cone6ag1463 | 1019 | FunFam | Calcium-transporting ATPase | 17 | 77 | - | - | |
| Cone6ag1463 | 1019 | Pfam | Cation transport ATPase (P-type) | 518 | 596 | - | - | |
| Cone6ag1463 | 1019 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 117 | 1017 | IPR023298 | - | |
| Cone6ag1463 | 1019 | CDD | P-type_ATPase_Ca_PMCA-like | 142 | 891 | - | - | |
| Cone6ag1463 | 1019 | Gene3D | - | 450 | 803 | IPR023214 | - | |
| Cone6ag1463 | 1019 | NCBIfam | calcium-translocating P-type ATPase, PMCA-type | 108 | 1017 | IPR006408 | GO:0005388(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0070588(InterPro) | |
| Cone6ag1463 | 1019 | PRINTS | P-type cation-transporting ATPase superfamily signature | 284 | 298 | - | - | |
| Cone6ag1463 | 1019 | PRINTS | P-type cation-transporting ATPase superfamily signature | 677 | 687 | - | - | |
| Cone6ag1463 | 1019 | PRINTS | P-type cation-transporting ATPase superfamily signature | 782 | 794 | - | - | |
| Cone6ag1463 | 1019 | PRINTS | P-type cation-transporting ATPase superfamily signature | 655 | 666 | - | - | |
| Cone6ag1463 | 1019 | PRINTS | P-type cation-transporting ATPase superfamily signature | 758 | 777 | - | - | |
| Cone6ag1463 | 1019 | PRINTS | P-type cation-transporting ATPase superfamily signature | 453 | 467 | - | - | |
| Cone6ag1463 | 1019 | FunFam | Calcium-transporting ATPase | 216 | 336 | - | - | |
| Cone6ag1463 | 1019 | SUPERFAMILY | Calcium ATPase, transduction domain A | 238 | 333 | IPR008250 | - | |
| Cone6ag1463 | 1019 | Gene3D | - | 463 | 662 | IPR023299 | GO:0000166(InterPro) | |
| Cone6ag1463 | 1019 | Pfam | E1-E2 ATPase | 236 | 432 | - | - | |
| Cone6ag1463 | 1019 | SFLD | C1.7: P-type atpase like | 435 | 810 | - | - | |
| Cone6ag1463 | 1019 | SUPERFAMILY | HAD-like | 452 | 863 | IPR036412 | - | |
| Cone6ag1463 | 1019 | PANTHER | CATION TRANSPORTING ATPASE | 77 | 1018 | - | GO:0005388(PANTHER)|GO:0005887(PANTHER)|GO:0019829(PANTHER)|GO:0043231(PANTHER) | |
| Cone6ag1463 | 1019 | Pfam | Ca2+-ATPase N terminal autoinhibitory domain | 5 | 50 | IPR024750 | GO:0005516(InterPro) | |
| Cone6ag1463 | 1019 | Gene3D | - | 134 | 336 | - | - | |
| Cone6ag1463 | 1019 | FunFam | Calcium-transporting ATPase | 651 | 803 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone13ag0581 | Cone-Chr13:6051084 | Cone6ag1463 | Cone-Chr6:11673578 | 0 | dispersed | |
| Cone1ag0800 | Cone-Chr1:53923275 | Cone6ag1463 | Cone-Chr6:11673578 | 7.16E-56 | dispersed | |
| Cone3ag0703 | Cone-Chr3:3598745 | Cone6ag1463 | Cone-Chr6:11673578 | 4.64E-74 | dispersed | |
| Cone4ag1612 | Cone-Chr4:12258704 | Cone6ag1463 | Cone-Chr6:11673578 | 0 | dispersed | |
| Cone5ag1028 | Cone-Chr5:4484233 | Cone6ag1463 | Cone-Chr6:11673578 | 0 | dispersed | |
| Cone6ag1463 | Cone-Chr6:11673578 | Cone7ag1339 | Cone-Chr7:9747578 | 0 | dispersed | |
| Cone6ag1463 | Cone-Chr6:11673578 | Cone7ag1325 | Cone-Chr7:9695965 | 2.75E-81 | wgd | |
| Cone6ag1463 | Cone-Chr6:11673578 | Cone9ag1384 | Cone-Chr9:10346429 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone6ag1463 | K01537 | - | csv:101212315 | 1665.2 |