Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag1511 ATGTTACCGATCATTGTTCTAATCCTCTCTTCACATTTTCTGCTTTATTTTGTTTGTCCCATTTCATTCAACATTTCTCACTTTGATTACTCTAATAACATAGTCTACGAAGGAGATGCAACGCCTTATCTTGGCGCCATTGAATTCGAAAATATCAACTACATTAGCCGTGTTGGCAGAGCCATTTATGCGCGAAGGGTGCACCTATGGGACTCGAGAACCGGAAATGTTTCAGACTTCATGACACGTTTTTCGCTTACAATTGATAATCTAGAACCTTCCTTCTACGCAGGAGGGATTGCTTTCTTCCTGGCTCCATTAGGGTTCGACCAGATTCCAAATTCCGCTGGTGCTTTTTTAGGTTTATTTAACACAACCACCTTGGACTCATCTAAGAACCAGATTGTTCTTGTCGAGTTTGACAGTAAGTCACGTGGAAAATGGGATCCTGATTTGTTGGAAGGGCATGTTGGGATCAATGTTAATTCAATTGCTTCAGTTGTTTATACTCCTTGGAATGCTACTTTCCACACTAGTGATGTTGTTGATGTGAGGATTTCTTACGATGCTTCTACTAGAAACTTTAGTGTGTTTTGGACTTACCAAAAGACATTTACACCTCAAGAAGCTAATAGTATTTCCTATCAAATTGATTTGAGGAAGGTTTTACCAGAGTGGGTCATTGTTGGTTTCTCAGCTGCTAAAGGTAGATATCCCGAAAGACACACAATTCGGTCATGGGAGTTCAGCTCAAGCTTGAGTGAGGACATCGTTAGAAAAAATGGAAAGAAGAGAAAATTAGTTTTATGTTCAACACTTTCAGTCGTAACATCTTTAATTCTTGGATTATTGTATATATCTTTTCGAATTCGGCGGAAGCAGAAAAAGAGGCAATCATCATTGGTTGACAAAATGACCTTGAGTTCCATCAATGATGATCTAGAAAGAGGAGTAGGACCCAAGAGGTTTTCTTACAAAGATCTTGTCTCAGCTACTAAGAACTTTTCAGATGAAAGAAAGTTGGGTGAAGGAGGATTTGGTGCAGTTTACAAAGGTTATCTGAATGATTTGGACATGACTGTAGCTGTGAAGAAAATCTGGAGGGATTCATCGCAAGGACAAAAGGAGTACATAACCGAAGTGAAGATCATCAGCCGAGTAAGACATAGAAATTTGGTACAATTGATAGGTTGGTGCCATGACAATGGTGAGTTCATGCTTGTTTATGAGTTTATGCCAAATGGTAGCCTCGATTCTCACTTGTTTGGCAAAAGAAACTCAAATGCTCTACCTTGGGCTCTAAGGTACAAGATATCCTTAGGTTTGGCCTCTGCTTTATTGTATCTTCATGAAGAATGGGAGCAATGTGTGGTACATAGGGACATCAAAGCAAGCAATGTAATGCTTGATTGTTGTTTCAATGTCAAGCTCGGTGACTTCGGTTTAGCGAGAATTATGAATCATGAGTTAAGTCTCCAAACAACTGGCCTCGCCGGAACTTTTGGTTACTTGGCTCCAGAATACATATCTACAGGTAAAGCTAGTAAAGAATCAGATGTTTATAGCTTTGGCGTGGTTGCCTTAGAAATCGTTACCGGGAAAAAGTCAATAGACATCATGGAAAAAAAGTGTTTAGTAGAGTGGGTTTGGGGGTTTTATGGAAGTGGAAGGCTTCTATCAGCTGTGGATGAGAAACTCCAATTAGAGTATAATGAAAAAGAAGTGGCGCATTTGATGAAAATTGGACTGTGGTGTGCTCATCCTGACTGCAAAATGAGACCTTCAATAAGGCAAGTAATTCAAGCTCTTAACTTTGAGTTGGTAGTGCCAAATCTTGCAAAGAGTATGCCTGTTTTGATGTTTCATGTGCCTTCTTCATCAGCCGCGGTTTCATCAACGGACTCGAGCTTTGAATTACTCGGTCGTTAA 1929 39.87 MLPIIVLILSSHFLLYFVCPISFNISHFDYSNNIVYEGDATPYLGAIEFENINYISRVGRAIYARRVHLWDSRTGNVSDFMTRFSLTIDNLEPSFYAGGIAFFLAPLGFDQIPNSAGAFLGLFNTTTLDSSKNQIVLVEFDSKSRGKWDPDLLEGHVGINVNSIASVVYTPWNATFHTSDVVDVRISYDASTRNFSVFWTYQKTFTPQEANSISYQIDLRKVLPEWVIVGFSAAKGRYPERHTIRSWEFSSSLSEDIVRKNGKKRKLVLCSTLSVVTSLILGLLYISFRIRRKQKKRQSSLVDKMTLSSINDDLERGVGPKRFSYKDLVSATKNFSDERKLGEGGFGAVYKGYLNDLDMTVAVKKIWRDSSQGQKEYITEVKIISRVRHRNLVQLIGWCHDNGEFMLVYEFMPNGSLDSHLFGKRNSNALPWALRYKISLGLASALLYLHEEWEQCVVHRDIKASNVMLDCCFNVKLGDFGLARIMNHELSLQTTGLAGTFGYLAPEYISTGKASKESDVYSFGVVALEIVTGKKSIDIMEKKCLVEWVWGFYGSGRLLSAVDEKLQLEYNEKEVAHLMKIGLWCAHPDCKMRPSIRQVIQALNFELVVPNLAKSMPVLMFHVPSSSAAVSSTDSSFELLGR 642
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 11942173 11944614 + Conep06aG0157000.1 Cone6ag1511 440395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag1511 642 SUPERFAMILY Concanavalin A-like lectins/glucanases 20 254 IPR013320 -
Cone6ag1511 642 Gene3D Transferase(Phosphotransferase) domain 1 412 624 - -
Cone6ag1511 642 Pfam Legume lectin domain 21 256 IPR001220 GO:0030246(InterPro)
Cone6ag1511 642 SUPERFAMILY Protein kinase-like (PK-like) 319 633 IPR011009 -
Cone6ag1511 642 CDD lectin_legume_LecRK_Arcelin_ConA 21 253 IPR001220 GO:0030246(InterPro)
Cone6ag1511 642 FunFam L-type lectin-domain containing receptor kinase IX.1 320 411 - -
Cone6ag1511 642 Pfam Protein tyrosine and serine/threonine kinase 338 603 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone6ag1511 642 ProSitePatterns Protein kinases ATP-binding region signature. 341 365 IPR017441 GO:0005524(InterPro)
Cone6ag1511 642 SMART serkin_6 335 608 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone6ag1511 642 PANTHER - 48 611 IPR050528 GO:0005886(PANTHER)
Cone6ag1511 642 FunFam Lectin-domain containing receptor kinase A4.3 412 623 - -
Cone6ag1511 642 CDD STKc_IRAK 341 604 - -
Cone6ag1511 642 ProSitePatterns Serine/Threonine protein kinases active-site signature. 457 469 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone6ag1511 642 ProSiteProfiles Protein kinase domain profile. 335 608 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone6ag1511 642 Gene3D - 20 273 - -
Cone6ag1511 642 Gene3D Phosphorylase Kinase; domain 1 320 411 - -
Cone6ag1511 642 ProSitePatterns Legume lectins alpha-chain signature. 223 232 IPR000985 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone6ag1511 Cone-Chr6:11942173 Cone9ag1435 Cone-Chr9:10668309 6.69E-252 dispersed
Cone6ag1511 Cone-Chr6:11942173 Cone6ag1512 Cone-Chr6:11949123 4.53E-256 tandem
Cone12ag0205 Cone-Chr12:1045788 Cone6ag1511 Cone-Chr6:11942173 1.29E-257 wgd
Cone12ag1006 Cone-Chr12:8523023 Cone6ag1511 Cone-Chr6:11942173 5.81E-15 wgd
Cone16ag0075 Cone-Chr16:371704 Cone6ag1511 Cone-Chr6:11942173 1.42E-77 wgd
Cone3ag1076 Cone-Chr3:29405308 Cone6ag1511 Cone-Chr6:11942173 1.02E-172 wgd
Cone6ag1511 Cone-Chr6:11942173 Cone9ag1434 Cone-Chr9:10665161 2.72E-261 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82975 PF02045 CBFB_NFYA 5.20E-26 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag1511 - - - 0.0