Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone6ag1512 | ATGCCTTCCTCTCTCTTCATCAACTTACTTCTCTTCACTATTTCTCGTTTCTTCCTCCCTTTTACCTGTTCAATCTATTTCCAAATAAGTCATTTTGATCCCACTTCCGAAGGCATCACATATCGAGGAGATGCCAAGCCATCTGATGGGTTCGTCGCATTTAATAGAATCGATTACATTTCCCGTGTCGGTTGGGCCACTTATTCCCAGCCAATAGAGCTCTGGGACTCCACCACAGGAAAACTTTTTGACTTTGTAACAAATTTCTCATTTGTTATAAACACACTAGCTAATTCTAAACATGGGCATGGACTCACATTCTTTCTTGCTCCTTTCGAATTTGATATACCACCAAATTCATCGGGCGGCTTTCTAGGCCTATTTAACACCACCACTGGTGACGCAAGTGACAACCAGATTGTTCTAGTTGAGTTTGATTCTTTTTCGGATCCTCAATGGGACCCTCCCGTTCAACATGTCGGAATTAATTCCAACTCTATTTGCTCTTCAGTTTATACGTCTTGGAATGCTAGTCTTCACAGTGGAGATACTGTCAATGTTTCGATCACTTATAATGCTACTACTAAGAACTTGACCGTGTCATGGAATTACCTACGTTCCTCGACTATACAAGAGAATACTAGTCTACATTACCAGATTGATCTAATGAAGGTTTTGCCCAAGCAGGTCATGATCGGATTTTCAGCTTCCACCGGTGAAGATGTCGAGCAACATAGCCTTTATTCATGGCAATTCATGTCAGGTTTAGATATAATCCCCAAAAATGGAAAACCTGAGAAAACAGGAAATTTTGTAGAGGTGATAATAATTTCTGGGGCGGTTCTGGTAGGTGTGTTCGTCATAGCAGTTGCAATAGTTTGGAGGCAAAAGCAAAAGATGGAGGAGAAAAAGAAAGTGGTGAACTTGACATTGATCAACGATGATATCAAAAGAGGAGTGGGACCAAGAAGGTTTTCATATAGAAGTCTTTGTTTGGCTACTAACAACTTCTCGAACGACCGGAAGTTGGGAGAAGGAGGGTTTGGTACCGTTTACAAAGGGCATTTAACCGATAACACTATGTCTGTGGCTGTGAAGAGGATCTCAAGAGGATCAAGGCAAGGGAAAAGAGAGTACATAACGGAAGTGAAGATCATTAGCCGGGTGAGGCATCGGAATTTGGTGCAATTCATCGGCTGGTGCCATGATAAAGGAGAGTTTCTAATTGTCTATGAATTCATGCCGAACGGTAGCCTTGATTCTCACCTCTTCGGCAAAAGACCATCTCTTCCTTGGGCTGTAAGATACAAAATATCATTGGGATTAGCTTCTGCATTGCTCTATCTCCATGAAGAATGGGAACAATGTGTCGTTCATAGAGATATCAAATCAAGTAATGTAATGTTGGATTCTGATTTCACCGTGAAGCTAGGCGATTTCGGATTAGCCCGGCTTATGGACCACGAGAGAAATTCTCAAACAACTGGCTTGGCTGGGACATTTGGTTACATGGCTCCAGAATACATAAGTACTGGTCGAGCAAGTAAAGAATCAGATGTTTTCAGTTACGGGGTTGTTGCTTTAGAGATTGCGACTGGAAGAAAGTCGAACGATCCGCTGGAAATGGATTCTCATATGGGACTAGTAGAGTGGATTTGGGATCTGTACGGAAGAGGTGAGCTTCATCAAGCTATGGATGAGAGATTAGATAAGAATATTGATCTGAAGCAAATAGAATGTTTGATGGTTGCCGGTTTATGGTGTGCTCATCCTGATCGAAGTGAACGGCCTTCCATAAAGCAAGTGATTAATGTTCTTAATTCTGAAGGGGAAATGCCAAATCTTCCGGCGAAAATGCCCGTTCCTACATTTCAAATGCCCAACCGTCCGTCTTTTTCTCATATCAAGAAACTATATGCGAGCACAAGTGTAGATACAAGTTGTTGA | 1947 | 41.86 | MPSSLFINLLLFTISRFFLPFTCSIYFQISHFDPTSEGITYRGDAKPSDGFVAFNRIDYISRVGWATYSQPIELWDSTTGKLFDFVTNFSFVINTLANSKHGHGLTFFLAPFEFDIPPNSSGGFLGLFNTTTGDASDNQIVLVEFDSFSDPQWDPPVQHVGINSNSICSSVYTSWNASLHSGDTVNVSITYNATTKNLTVSWNYLRSSTIQENTSLHYQIDLMKVLPKQVMIGFSASTGEDVEQHSLYSWQFMSGLDIIPKNGKPEKTGNFVEVIIISGAVLVGVFVIAVAIVWRQKQKMEEKKKVVNLTLINDDIKRGVGPRRFSYRSLCLATNNFSNDRKLGEGGFGTVYKGHLTDNTMSVAVKRISRGSRQGKREYITEVKIISRVRHRNLVQFIGWCHDKGEFLIVYEFMPNGSLDSHLFGKRPSLPWAVRYKISLGLASALLYLHEEWEQCVVHRDIKSSNVMLDSDFTVKLGDFGLARLMDHERNSQTTGLAGTFGYMAPEYISTGRASKESDVFSYGVVALEIATGRKSNDPLEMDSHMGLVEWIWDLYGRGELHQAMDERLDKNIDLKQIECLMVAGLWCAHPDRSERPSIKQVINVLNSEGEMPNLPAKMPVPTFQMPNRPSFSHIKKLYASTSVDTSC | 648 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 11949123 | 11951069 | + | Conep06aG0157100.1 | Cone6ag1512 | 440396 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone6ag1512 | 648 | Pfam | Legume lectin domain | 26 | 261 | IPR001220 | GO:0030246(InterPro) | |
Cone6ag1512 | 648 | FunFam | Lectin-domain containing receptor kinase A4.3 | 414 | 626 | - | - | |
Cone6ag1512 | 648 | Gene3D | Phosphorylase Kinase; domain 1 | 322 | 413 | - | - | |
Cone6ag1512 | 648 | Gene3D | Transferase(Phosphotransferase) domain 1 | 414 | 627 | - | - | |
Cone6ag1512 | 648 | FunFam | L-type lectin-domain containing receptor kinase IX.1 | 322 | 413 | - | - | |
Cone6ag1512 | 648 | FunFam | L-type lectin-domain containing receptor kinase IX.1 | 23 | 265 | - | - | |
Cone6ag1512 | 648 | PANTHER | - | 56 | 616 | IPR050528 | GO:0005886(PANTHER) | |
Cone6ag1512 | 648 | ProSiteProfiles | Protein kinase domain profile. | 337 | 615 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone6ag1512 | 648 | SUPERFAMILY | Protein kinase-like (PK-like) | 321 | 632 | IPR011009 | - | |
Cone6ag1512 | 648 | SMART | serkin_6 | 337 | 606 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone6ag1512 | 648 | Gene3D | - | 23 | 262 | - | - | |
Cone6ag1512 | 648 | ProSitePatterns | Protein kinases ATP-binding region signature. | 343 | 366 | IPR017441 | GO:0005524(InterPro) | |
Cone6ag1512 | 648 | SUPERFAMILY | Concanavalin A-like lectins/glucanases | 24 | 256 | IPR013320 | - | |
Cone6ag1512 | 648 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 457 | 469 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone6ag1512 | 648 | CDD | STKc_IRAK | 343 | 607 | - | - | |
Cone6ag1512 | 648 | Pfam | Protein tyrosine and serine/threonine kinase | 340 | 605 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone6ag1512 | 648 | CDD | lectin_legume_LecRK_Arcelin_ConA | 25 | 256 | IPR001220 | GO:0030246(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone12ag1006 | Cone-Chr12:8523023 | Cone6ag1512 | Cone-Chr6:11949123 | 1.39E-16 | dispersed | |
Cone19ag0295 | Cone-Chr19:2154855 | Cone6ag1512 | Cone-Chr6:11949123 | 1.52E-205 | dispersed | |
Cone3ag1076 | Cone-Chr3:29405308 | Cone6ag1512 | Cone-Chr6:11949123 | 2.74E-188 | dispersed | |
Cone6ag1512 | Cone-Chr6:11949123 | Cone9ag1435 | Cone-Chr9:10668309 | 0 | dispersed | |
Cone6ag1511 | Cone-Chr6:11942173 | Cone6ag1512 | Cone-Chr6:11949123 | 4.53E-256 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
82976 | PF00175 | NAD_binding_1 | 1.10E-25 | CL0091 | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone6ag1512 | - | - | - | 0.0 |