Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone6ag1528 | ATGGTTTTTTCGGGTTCCTTGCAATTTTCCCAAAAATGGGGACTCTGTAGGAGCCAAGAGCGCAGAAAACATTACAAGTCTAATGTATTGAGAGAAAAGTTGCATTTGTTGGGTGCTGGCATTTCTTCACAAGTCTCATTTCAGCAACAAAACTTATGGAGTATTTTCCTCTCAGACAGTTCATATCGGCCAATAAGTTATCTGCCATACAGATACAATGTTCTCAAGTGCCATTCTTCTTTAGTATCTGGAGGAGGATCTGAACTTCCTCATATGATGAAAACAGCTGCTTCAGCATTGACAAGGTCATATGAAATTTTACAAGGTAGACCTCTTATTTCTAAGTTGGTTCCAGCAATTGCTCTCATTATATTCGCTCTGTGTGGCATTGCTCCACTTTTACGTTGGACCCGAAATGCTTTTCTTCATAGAAATGATAATGGTTGGAAGAAAAGTAGCACATATTATGTTATGACTTCTTATCTTCAACCTCTGCTGCTTTGGACGGGAGCAACACTTGTTTGCAGAGCGTTGGATCCAGTGGTTCTACCAACAGAAGCTAGCCAGATTGTTAAACAACGACTCTTGAATTTTGTGAGGTCATTGTCGACTGTATTGGCCTTTGCCTATTGTTTATCAAGTGCGATTCAACAAGCACAAAAGTTCTTTATGGAGACTAATGAATCCAGTGATACAAGAACTATGGGTTTCCAATTTGCAGGGAAAGCTGTATATTCGGCAGTTTGGGTTGCTGCTGTTTCATTGTTTATGGAATTACTCGGTTTTTCCACCCAGAAGTGGCTCACTGCTGGAGGTCTTGGGACCGTATTGCTTACTCTTGCTGGCCGTGAGATATTCACAAATTTCCTTTCTAGTGCGATGATTCATGCAACCCGACCTTTCATTGTGAATGAATGGATTCAAACAAAGATTGAAGGTTATGAAGTCTCTGGCTTTGTTGAGCATGTGGGTTGGTGGTCCCCCACAATTGTAAGAGGTGAAGACCGAGAAGCAGTTCACATTCCAAACCACAAGTTCACTGTGAATGTTGTGAGGAATCTCAGTCAGAAAACTCATTGGCGGATTAAAACCCATCTAGCCATAAGTCATTTGGATGTCAATAAGATTAACAATATTGTTGCTGATATGCGCAAAGTCTTGGCCAAGAACCCTCAAGTTGAACACAAGAGGCTGCATAGGAGAGTCTTTCTTGACAATATCCATCCCGAAAATCAGGCGCTTTTGATCTTAATATCATGTTTTGTAAAGACCTCTCATCATGAAGAGTATCTACGTGTCAAGGAAGCTATACTATTGGATCTTCTTAGAGTGATCAGCCATCACCGAGCCCGGCTTGCCACTCCAATCCGCACAGTGCAGAAAATATACAGCGACACAGACTTAGAGAACGTTCCATTTGCTGATTCAATATTCAACCATGGTGGAGTACCATCTAGACGTCCATTACTCATGATTGAACCTTCTTACAAAATCAACGGTGAAGATAAATCCAAGAACAAAAACCGCTCGTCCAAAGACAGTGAGACCCCGTCAAAACCAGCAGCCGAAAACACTAGTAAGGTCAAAGAAGCTCCACCATTTTCTGATGGGCCTGCTGTGGTCGAAGAAATTACTAAAAAACTGACATCAAAACAACCCATCTTGAAGAAAGACTCCAAGGTGGACTTGGAAAAGTCAAATTCTGAGGCCGTGGATATGCAGGTAAAAACTGAAAGTGAGAAACCGCAGCCACCTTTGTCAAGGCCTGCGTTGGAAGAGAATATAGTACTTGGAGTTGCTTTAGAGGGGTCAAAGAGAACACTTCCTATTGAGGATGATTATAGTCCTTCTTCTGAATCTCCTCCTGAGGTTAAGGAAAAGGAAATGACCACCTCTCGGAAAGGTAGTAGTGGGCCATTGACTGCTGAGAAGGATAAGAAAGATGGTCAGATTCCATCTTCTCCGAGTGATTAA | 1974 | 41.89 | MVFSGSLQFSQKWGLCRSQERRKHYKSNVLREKLHLLGAGISSQVSFQQQNLWSIFLSDSSYRPISYLPYRYNVLKCHSSLVSGGGSELPHMMKTAASALTRSYEILQGRPLISKLVPAIALIIFALCGIAPLLRWTRNAFLHRNDNGWKKSSTYYVMTSYLQPLLLWTGATLVCRALDPVVLPTEASQIVKQRLLNFVRSLSTVLAFAYCLSSAIQQAQKFFMETNESSDTRTMGFQFAGKAVYSAVWVAAVSLFMELLGFSTQKWLTAGGLGTVLLTLAGREIFTNFLSSAMIHATRPFIVNEWIQTKIEGYEVSGFVEHVGWWSPTIVRGEDREAVHIPNHKFTVNVVRNLSQKTHWRIKTHLAISHLDVNKINNIVADMRKVLAKNPQVEHKRLHRRVFLDNIHPENQALLILISCFVKTSHHEEYLRVKEAILLDLLRVISHHRARLATPIRTVQKIYSDTDLENVPFADSIFNHGGVPSRRPLLMIEPSYKINGEDKSKNKNRSSKDSETPSKPAAENTSKVKEAPPFSDGPAVVEEITKKLTSKQPILKKDSKVDLEKSNSEAVDMQVKTESEKPQPPLSRPALEENIVLGVALEGSKRTLPIEDDYSPSSESPPEVKEKEMTTSRKGSSGPLTAEKDKKDGQIPSSPSD | 657 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 12026912 | 12032036 | + | Conep06aG0158700.1 | Cone6ag1528 | 440412 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone6ag1528 | 657 | MobiDBLite | consensus disorder prediction | 559 | 657 | - | - | |
Cone6ag1528 | 657 | MobiDBLite | consensus disorder prediction | 559 | 576 | - | - | |
Cone6ag1528 | 657 | Gene3D | - | 195 | 299 | - | - | |
Cone6ag1528 | 657 | MobiDBLite | consensus disorder prediction | 618 | 632 | - | - | |
Cone6ag1528 | 657 | PANTHER | OW CONDUCTANCE MECHANOSENSITIVE CHANNEL | 1 | 648 | IPR045042 | - | |
Cone6ag1528 | 657 | MobiDBLite | consensus disorder prediction | 497 | 539 | - | - | |
Cone6ag1528 | 657 | MobiDBLite | consensus disorder prediction | 498 | 516 | - | - | |
Cone6ag1528 | 657 | SUPERFAMILY | Sm-like ribonucleoproteins | 285 | 355 | IPR010920 | - | |
Cone6ag1528 | 657 | Pfam | Mechanosensitive ion channel, beta-domain | 285 | 355 | IPR006685 | GO:0016020(InterPro)|GO:0055085(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone17ag1179 | Cone-Chr17:8645818 | Cone6ag1528 | Cone-Chr6:12026912 | 1.03E-224 | wgd | |
Cone6ag1528 | Cone-Chr6:12026912 | Cone9ag1443 | Cone-Chr9:10712007 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone6ag1528 | K22047 | - | mdm:103410916 | 813.142 |