Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag1528 ATGGTTTTTTCGGGTTCCTTGCAATTTTCCCAAAAATGGGGACTCTGTAGGAGCCAAGAGCGCAGAAAACATTACAAGTCTAATGTATTGAGAGAAAAGTTGCATTTGTTGGGTGCTGGCATTTCTTCACAAGTCTCATTTCAGCAACAAAACTTATGGAGTATTTTCCTCTCAGACAGTTCATATCGGCCAATAAGTTATCTGCCATACAGATACAATGTTCTCAAGTGCCATTCTTCTTTAGTATCTGGAGGAGGATCTGAACTTCCTCATATGATGAAAACAGCTGCTTCAGCATTGACAAGGTCATATGAAATTTTACAAGGTAGACCTCTTATTTCTAAGTTGGTTCCAGCAATTGCTCTCATTATATTCGCTCTGTGTGGCATTGCTCCACTTTTACGTTGGACCCGAAATGCTTTTCTTCATAGAAATGATAATGGTTGGAAGAAAAGTAGCACATATTATGTTATGACTTCTTATCTTCAACCTCTGCTGCTTTGGACGGGAGCAACACTTGTTTGCAGAGCGTTGGATCCAGTGGTTCTACCAACAGAAGCTAGCCAGATTGTTAAACAACGACTCTTGAATTTTGTGAGGTCATTGTCGACTGTATTGGCCTTTGCCTATTGTTTATCAAGTGCGATTCAACAAGCACAAAAGTTCTTTATGGAGACTAATGAATCCAGTGATACAAGAACTATGGGTTTCCAATTTGCAGGGAAAGCTGTATATTCGGCAGTTTGGGTTGCTGCTGTTTCATTGTTTATGGAATTACTCGGTTTTTCCACCCAGAAGTGGCTCACTGCTGGAGGTCTTGGGACCGTATTGCTTACTCTTGCTGGCCGTGAGATATTCACAAATTTCCTTTCTAGTGCGATGATTCATGCAACCCGACCTTTCATTGTGAATGAATGGATTCAAACAAAGATTGAAGGTTATGAAGTCTCTGGCTTTGTTGAGCATGTGGGTTGGTGGTCCCCCACAATTGTAAGAGGTGAAGACCGAGAAGCAGTTCACATTCCAAACCACAAGTTCACTGTGAATGTTGTGAGGAATCTCAGTCAGAAAACTCATTGGCGGATTAAAACCCATCTAGCCATAAGTCATTTGGATGTCAATAAGATTAACAATATTGTTGCTGATATGCGCAAAGTCTTGGCCAAGAACCCTCAAGTTGAACACAAGAGGCTGCATAGGAGAGTCTTTCTTGACAATATCCATCCCGAAAATCAGGCGCTTTTGATCTTAATATCATGTTTTGTAAAGACCTCTCATCATGAAGAGTATCTACGTGTCAAGGAAGCTATACTATTGGATCTTCTTAGAGTGATCAGCCATCACCGAGCCCGGCTTGCCACTCCAATCCGCACAGTGCAGAAAATATACAGCGACACAGACTTAGAGAACGTTCCATTTGCTGATTCAATATTCAACCATGGTGGAGTACCATCTAGACGTCCATTACTCATGATTGAACCTTCTTACAAAATCAACGGTGAAGATAAATCCAAGAACAAAAACCGCTCGTCCAAAGACAGTGAGACCCCGTCAAAACCAGCAGCCGAAAACACTAGTAAGGTCAAAGAAGCTCCACCATTTTCTGATGGGCCTGCTGTGGTCGAAGAAATTACTAAAAAACTGACATCAAAACAACCCATCTTGAAGAAAGACTCCAAGGTGGACTTGGAAAAGTCAAATTCTGAGGCCGTGGATATGCAGGTAAAAACTGAAAGTGAGAAACCGCAGCCACCTTTGTCAAGGCCTGCGTTGGAAGAGAATATAGTACTTGGAGTTGCTTTAGAGGGGTCAAAGAGAACACTTCCTATTGAGGATGATTATAGTCCTTCTTCTGAATCTCCTCCTGAGGTTAAGGAAAAGGAAATGACCACCTCTCGGAAAGGTAGTAGTGGGCCATTGACTGCTGAGAAGGATAAGAAAGATGGTCAGATTCCATCTTCTCCGAGTGATTAA 1974 41.89 MVFSGSLQFSQKWGLCRSQERRKHYKSNVLREKLHLLGAGISSQVSFQQQNLWSIFLSDSSYRPISYLPYRYNVLKCHSSLVSGGGSELPHMMKTAASALTRSYEILQGRPLISKLVPAIALIIFALCGIAPLLRWTRNAFLHRNDNGWKKSSTYYVMTSYLQPLLLWTGATLVCRALDPVVLPTEASQIVKQRLLNFVRSLSTVLAFAYCLSSAIQQAQKFFMETNESSDTRTMGFQFAGKAVYSAVWVAAVSLFMELLGFSTQKWLTAGGLGTVLLTLAGREIFTNFLSSAMIHATRPFIVNEWIQTKIEGYEVSGFVEHVGWWSPTIVRGEDREAVHIPNHKFTVNVVRNLSQKTHWRIKTHLAISHLDVNKINNIVADMRKVLAKNPQVEHKRLHRRVFLDNIHPENQALLILISCFVKTSHHEEYLRVKEAILLDLLRVISHHRARLATPIRTVQKIYSDTDLENVPFADSIFNHGGVPSRRPLLMIEPSYKINGEDKSKNKNRSSKDSETPSKPAAENTSKVKEAPPFSDGPAVVEEITKKLTSKQPILKKDSKVDLEKSNSEAVDMQVKTESEKPQPPLSRPALEENIVLGVALEGSKRTLPIEDDYSPSSESPPEVKEKEMTTSRKGSSGPLTAEKDKKDGQIPSSPSD 657
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 12026912 12032036 + Conep06aG0158700.1 Cone6ag1528 440412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag1528 657 MobiDBLite consensus disorder prediction 559 657 - -
Cone6ag1528 657 MobiDBLite consensus disorder prediction 559 576 - -
Cone6ag1528 657 Gene3D - 195 299 - -
Cone6ag1528 657 MobiDBLite consensus disorder prediction 618 632 - -
Cone6ag1528 657 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 648 IPR045042 -
Cone6ag1528 657 MobiDBLite consensus disorder prediction 497 539 - -
Cone6ag1528 657 MobiDBLite consensus disorder prediction 498 516 - -
Cone6ag1528 657 SUPERFAMILY Sm-like ribonucleoproteins 285 355 IPR010920 -
Cone6ag1528 657 Pfam Mechanosensitive ion channel, beta-domain 285 355 IPR006685 GO:0016020(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag1179 Cone-Chr17:8645818 Cone6ag1528 Cone-Chr6:12026912 1.03E-224 wgd
Cone6ag1528 Cone-Chr6:12026912 Cone9ag1443 Cone-Chr9:10712007 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag1528 K22047 - mdm:103410916 813.142