Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag1606 ATGGTGGCCCCACTCCAAGACCAAGAACTGACTGACTTCACACTTGCGAATTCTCTTGCTGCTGGCGATTATGGCGTCGATTTAGGTTCTAACTTCGTCTTCAACCTCGGGCCGAGCTTGCTGATTGACATCCGTAAACTAGAAATCCTTCAAGTGATTGGAGAAGGCCATTTATCCAGAGTCTATGAAGGACTGTATGAATCAAAGCCTGTTGCCATTAAGGTTCTGCAGATGAGAAGAACAGCAGCTCTAAGCTCTGAAACTAAGGAAAAATTCGAGAGGGAGGTCACTTTGCTTTCAAGGGTCAAACATGAAAAGATTATTAAGTTTATTGGAGCTTCACTGCACCCAACTTTGATGATAATTACGGAGCTAATGAAAGGCGGGACCCTCCAGAAATACCTCTGGAACATTCGTCCGAGACCTCTGGATCTTAAAGTGTCTGTCAGCTTTGCTCTGGAAATCTCTAATGTTATGGAGTTCTTGCATGAAAACAGAATCATTCATCGTGATTTGAAGCCAACCAATATACTAGTAACGGATGATGGGCGAGGAATTAAGCTGGCTGATTTCGGGCAAGCTCGAGAAGAGGTTCCCGGTGAAATGACCAGTGAGGCTGGTACTTACCGGTGGATGGCCCCTGAGCTGTTTAGTGTGGATTCACTACCGGTCGGAGGTAAGTTACACTATAATCACAAGGCAGATGTTTATAGCTTCTCCATTGTTTTGTGGGAATTGCTCACAAACAAAACTCCTTTCAAGGGCAGAAGTAACATCATGGTTGCGTATGCTGCATCCCAGAGAGTGAGGCCTGGACTAGAGGAGGTTCCGGAGAATATGATTCCATTCTTGCATTCATGTTGGGCTGAGGACCCGATTGATCGTCCAGAGTTCACCGAAATTTCTCGCTTTCTTTCTAATTATCTCCAAGACTTATGTCCAACAAGAGATTTATTGCCTCCACTTCCCAAGGAAGTTGAGATGCATGATCTGATGGCTAACAGTACATCGGACTCCCAAAACTGCCTGCACAATGATTATGTCGTGGTGAGAGAGCATGCTGAAGAAGAAGAGAAGGTGAGCAAGAGGCGTAAGAATTCTCCTTCCCCCTGCTTCCTCTGTTGCTTCTCTGAATGCTGCTGGAGTGATTGA 1152 45.4 MVAPLQDQELTDFTLANSLAAGDYGVDLGSNFVFNLGPSLLIDIRKLEILQVIGEGHLSRVYEGLYESKPVAIKVLQMRRTAALSSETKEKFEREVTLLSRVKHEKIIKFIGASLHPTLMIITELMKGGTLQKYLWNIRPRPLDLKVSVSFALEISNVMEFLHENRIIHRDLKPTNILVTDDGRGIKLADFGQAREEVPGEMTSEAGTYRWMAPELFSVDSLPVGGKLHYNHKADVYSFSIVLWELLTNKTPFKGRSNIMVAYAASQRVRPGLEEVPENMIPFLHSCWAEDPIDRPEFTEISRFLSNYLQDLCPTRDLLPPLPKEVEMHDLMANSTSDSQNCLHNDYVVVREHAEEEEKVSKRRKNSPSPCFLCCFSECCWSD 383
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 12440854 12443491 + Conep06aG0166900.1 Cone6ag1606 440490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag1606 383 ProSiteProfiles Protein kinase domain profile. 47 309 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone6ag1606 383 PRINTS Tyrosine kinase catalytic domain signature 123 136 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone6ag1606 383 PRINTS Tyrosine kinase catalytic domain signature 161 179 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone6ag1606 383 PRINTS Tyrosine kinase catalytic domain signature 276 298 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone6ag1606 383 PRINTS Tyrosine kinase catalytic domain signature 234 256 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone6ag1606 383 CDD STKc_MAP3K-like 53 305 - -
Cone6ag1606 383 Gene3D Transferase(Phosphotransferase) domain 1 128 368 - -
Cone6ag1606 383 PIRSF TyrPK_CSF1-R 45 141 - -
Cone6ag1606 383 PIRSF TyrPK_CSF1-R 137 371 - -
Cone6ag1606 383 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone6ag1606 383 PANTHER SERINE-THREONINE PROTEIN KINASE 41 306 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Cone6ag1606 383 FunFam Kinase suppressor of Ras 1 37 126 - -
Cone6ag1606 383 Gene3D Phosphorylase Kinase; domain 1 38 127 - -
Cone6ag1606 383 SUPERFAMILY Protein kinase-like (PK-like) 40 335 IPR011009 -
Cone6ag1606 383 SMART serkin_6 47 309 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone6ag1606 383 Pfam Protein tyrosine and serine/threonine kinase 48 305 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone19ag1445 Cone-Chr19:9410125 Cone6ag1606 Cone-Chr6:12440854 1.01E-88 dispersed
Cone3ag0473 Cone-Chr3:2302328 Cone6ag1606 Cone-Chr6:12440854 4.76E-87 dispersed
Cone6ag1606 Cone-Chr6:12440854 Cone8ag0877 Cone-Chr8:8624044 1.38E-50 dispersed
Cone4ag1372 Cone-Chr4:11134160 Cone6ag1606 Cone-Chr6:12440854 2.21E-26 wgd
Cone6ag1606 Cone-Chr6:12440854 Cone7ag1559 Cone-Chr7:10715928 5.42E-26 wgd
Cone6ag1606 Cone-Chr6:12440854 Cone9ag1532 Cone-Chr9:11167813 1.61E-117 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82980 PF00004 AAA 7.90E-36 CL0023 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag1606 - - - 0.0