Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone6ag1607 | ATGGGGACAAGAGAAGAGGCTACTCCTCCTAAGACTACCAGACCAGCCTCTTCATCTCAGGAAATTCCGACAACACCTTCATATCCCGATTGGTCCAGCTCGATGCAGGCTTATTATGGAGCCGGTGCGACCCCACCTCCGTTTTTTGCATCAACTCCAAGTCCCCACCACTATATGTGGGGAGGCCAGCATCCTTTGATTCCCCCATATGGGACCCCTGTCCCATATACAGCTATATATCCTCCGGGTGGAGTTTTTGCTCATCCTAACATGACCACGGTTCCACTGTCGGCTCAGACTAACACAGAAACAGAAGGGAAGGTGCCTGATGGAAAGGACAAGGCTTCTGGGAAAAAAACAAAGGGTGGTCAAGGAAATAGTGTGAAGGCGGCACCTTCAGGTTCTGGAAATGATGGTCAAAGTACTGAAAGTGCTACTGAGGGTTCTTCTGATGGTAGCGATGAGAATCCAAACCAACAGGAATTTTCTGCAAGTAAGAAGGGAAGCTTCAACCAGATGCTTGCAGATGGAGCCAATGCACAGAATAGCAGTGCCGGGCCAAACCTTCAATCTTCAGTAACTGGGAAACCCATAGTCCCTATGCCCCCAACCAATCTGAATATAGGAATGGACTTATGGAACTTGGGGGTCGCTGGTTCTGGGCCCGCAAAAGTGAGGCCCAATCAAATGGGTGGTGCCCTTGTCCCGGCACCCCCCGAGCAATGGATTCAAAAGGACGAACGGGAACTGAAAAGACAGAAGAGGAAGCAATCTAATAGGGAGTCGGCCCGTAGGTCACGCCTGCGTAAACAGGCGGAATGTGAAGAGTTACAAGCAAGGGTGGAGGCATTGAGCAATGAGAATATAACTCTTAGAGATGAGTTGCAGGGTCTTTCTGATGAATGTGAGAAGCTTGTATCGGAAAATAGTTCCCTCAAGGAAGAATTGACACAATTGTGTGGACCGGAAGTGGTAAGTAATCTTGAAGACGGAAATCCGAAATCAGCTCTTCAATCTCAAGGTGGTGAAGGCAAAAGCTAA | 1041 | 48.8 | MGTREEATPPKTTRPASSSQEIPTTPSYPDWSSSMQAYYGAGATPPPFFASTPSPHHYMWGGQHPLIPPYGTPVPYTAIYPPGGVFAHPNMTTVPLSAQTNTETEGKVPDGKDKASGKKTKGGQGNSVKAAPSGSGNDGQSTESATEGSSDGSDENPNQQEFSASKKGSFNQMLADGANAQNSSAGPNLQSSVTGKPIVPMPPTNLNIGMDLWNLGVAGSGPAKVRPNQMGGALVPAPPEQWIQKDERELKRQKRKQSNRESARRSRLRKQAECEELQARVEALSNENITLRDELQGLSDECEKLVSENSSLKEELTQLCGPEVVSNLEDGNPKSALQSQGGEGKS | 346 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 12444611 | 12448204 | + | Conep06aG0167000.1 | Cone6ag1607 | 440491 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone6ag1607 | 346 | MobiDBLite | consensus disorder prediction | 178 | 198 | - | - | |
Cone6ag1607 | 346 | Coils | Coil | 260 | 315 | - | - | |
Cone6ag1607 | 346 | MobiDBLite | consensus disorder prediction | 224 | 272 | - | - | |
Cone6ag1607 | 346 | CDD | bZIP_plant_GBF1 | 252 | 302 | IPR045314 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone6ag1607 | 346 | MobiDBLite | consensus disorder prediction | 331 | 346 | - | - | |
Cone6ag1607 | 346 | SUPERFAMILY | Leucine zipper domain | 250 | 306 | IPR046347 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone6ag1607 | 346 | MobiDBLite | consensus disorder prediction | 178 | 200 | - | - | |
Cone6ag1607 | 346 | MobiDBLite | consensus disorder prediction | 99 | 165 | - | - | |
Cone6ag1607 | 346 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 249 | 312 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone6ag1607 | 346 | PANTHER | G-BOX-BINDING FACTOR 3-RELATED | 15 | 330 | IPR044827 | GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0006355(PANTHER)|GO:0043565(InterPro)|GO:0043565(PANTHER) | |
Cone6ag1607 | 346 | MobiDBLite | consensus disorder prediction | 323 | 346 | - | - | |
Cone6ag1607 | 346 | MobiDBLite | consensus disorder prediction | 120 | 165 | - | - | |
Cone6ag1607 | 346 | FunFam | BZIP transcription factor | 249 | 300 | - | - | |
Cone6ag1607 | 346 | Pfam | G-box binding protein MFMR | 1 | 91 | IPR012900 | - | |
Cone6ag1607 | 346 | MobiDBLite | consensus disorder prediction | 10 | 39 | - | - | |
Cone6ag1607 | 346 | SMART | brlzneu | 247 | 311 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone6ag1607 | 346 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 254 | 269 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone6ag1607 | 346 | MobiDBLite | consensus disorder prediction | 242 | 256 | - | - | |
Cone6ag1607 | 346 | MobiDBLite | consensus disorder prediction | 1 | 45 | - | - | |
Cone6ag1607 | 346 | Pfam | bZIP transcription factor | 247 | 309 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone6ag1607 | 346 | Gene3D | - | 250 | 304 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone18ag1039 | Cone-Chr18:7655520 | Cone6ag1607 | Cone-Chr6:12444611 | 8.00E-35 | dispersed | |
Cone6ag1607 | Cone-Chr6:12444611 | Cone8ag0496 | Cone-Chr8:3532227 | 4.70E-39 | dispersed | |
Cone6ag1607 | Cone-Chr6:12444611 | Cone9ag1533 | Cone-Chr9:11169867 | 1.86E-199 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
46415 | PF00004 | AAA | 7.90E-36 | CL0023 | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone6ag1607 | K09060 | - | csv:101217128 | 477.248 |