Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag1615 ATGACAGACCATGTGGTTAGGCTGAATGGCGGAACACCAGGTGGCAGTGGTGCTCCCTGGCCACCACCGCCACCACAACCTCCACTTTCCGGTGAGATGACTTCAAGCTCTGGTCCAAACGGAGTTCCATTGCCACCACCTTCTCCGAGCTATGCCCTAGGGTTTAACAAGAGCACGTTCACATACGACGAGCTGGCGGCAGCTACCAACGGGTTTTCTCAGACAAACTTGTTGGGTCAAGGCGGGTTCGGGTACGTACACAAGGGCGTCCTTCCTAACGGAAAAGAAGTTGCCGTTAAGAGTTTGAAGAGTGGGAGTGGACAAGGAGAGAGAGAGTTTCAAGCTGAGGTTGATATTATTAGTAGAGTTCATCATCGTCATCTTGTCTCACTTGTTGGGTACTGCATTGCTAGTGGTCAGAGAATGTTAGTCTATGAATTTGTTCCTAATGGAACCCTTGAACATCACCTTCATGCAAAGGGTCTTCCAGTTATGGACTGGCCAGCTAGACTCCGTATTGCAGTAGGAATGGCCAAAGGGCTTGCATATCTTCATGAAGACTGCCATCCTCGCATTATTCATCGAGATATCAAATCTGCTAACATTCTACTTGACAACAACTTCGAAGCTATGGTGGCCGATTTTGGATTGGCAAAACTGTCTTCTGACAATTTCACTCATGTCTCTACAAGGGTTATGGGCACGTTCGGGTATTTAGCTCCAGAATATGCATCAAGCGGCAAGCTAACAGATAAATCTGATGTTTTCTCATTTGGAGTAATGCTCTTAGAGCTCATCACCGGAAAGCAGCCGGTCGACACCACAAATGTTATGGAGGACAGCTTAGTCGACTGGGCTCGACCGCTTATGTCTCGTGCCCTGGGGGATGGTAACTATCAACAGCTTGCCGATATACGGTTGGAAGGTAACTACAACCCGCAAGAGATGGCTCATCTTGTCGCTTCTGCGGCGGCTTGCATCCGCCATTCCGCTAGAAAACGTCCCAAAATGAGTCAGATTGTGAGGGCATTGGAAGGAGATGTGTCACTAGAAGACTTGAACGAGGGAGTCAGGCCGGGACAGAGCTCGGTTTTTCCGGCAGGAAGCAGAGATTATGATTCAAATGCATATAATGCTGATATGAAAAGGTTCAGAAAGATAGCTTTGGAAAGCGAGGAATTTCCGAGCGGCGAACATGGCGCCTCGAGTACTAGTAACGAGTCAGACGAGACGGGTTAA 1239 48.51 MTDHVVRLNGGTPGGSGAPWPPPPPQPPLSGEMTSSSGPNGVPLPPPSPSYALGFNKSTFTYDELAAATNGFSQTNLLGQGGFGYVHKGVLPNGKEVAVKSLKSGSGQGEREFQAEVDIISRVHHRHLVSLVGYCIASGQRMLVYEFVPNGTLEHHLHAKGLPVMDWPARLRIAVGMAKGLAYLHEDCHPRIIHRDIKSANILLDNNFEAMVADFGLAKLSSDNFTHVSTRVMGTFGYLAPEYASSGKLTDKSDVFSFGVMLLELITGKQPVDTTNVMEDSLVDWARPLMSRALGDGNYQQLADIRLEGNYNPQEMAHLVASAAACIRHSARKRPKMSQIVRALEGDVSLEDLNEGVRPGQSSVFPAGSRDYDSNAYNADMKRFRKIALESEEFPSGEHGASSTSNESDETG 412
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 12479507 12481297 + Conep06aG0167800.1 Cone6ag1615 440499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag1615 412 ProSiteProfiles Protein kinase domain profile. 72 350 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone6ag1615 412 SMART serkin_6 72 344 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone6ag1615 412 MobiDBLite consensus disorder prediction 389 412 - -
Cone6ag1615 412 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone6ag1615 412 SUPERFAMILY Protein kinase-like (PK-like) 47 344 IPR011009 -
Cone6ag1615 412 ProSitePatterns Protein kinases ATP-binding region signature. 78 100 IPR017441 GO:0005524(InterPro)
Cone6ag1615 412 FunFam Proline-rich receptor-like protein kinase PERK1 148 355 - -
Cone6ag1615 412 MobiDBLite consensus disorder prediction 397 412 - -
Cone6ag1615 412 MobiDBLite consensus disorder prediction 1 48 - -
Cone6ag1615 412 CDD STKc_IRAK 78 346 - -
Cone6ag1615 412 Pfam Protein tyrosine and serine/threonine kinase 75 344 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone6ag1615 412 Gene3D Transferase(Phosphotransferase) domain 1 148 355 - -
Cone6ag1615 412 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 56 387 IPR047117 -
Cone6ag1615 412 FunFam proline-rich receptor-like protein kinase PERK1 50 147 - -
Cone6ag1615 412 Gene3D Phosphorylase Kinase; domain 1 50 147 - -
Cone6ag1615 412 MobiDBLite consensus disorder prediction 16 30 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag0743 Cone-Chr16:8484471 Cone6ag1615 Cone-Chr6:12479507 9.54E-181 dispersed
Cone2ag0294 Cone-Chr2:1523880 Cone6ag1615 Cone-Chr6:12479507 4.62E-185 dispersed
Cone4ag0731 Cone-Chr4:4028971 Cone6ag1615 Cone-Chr6:12479507 3.55E-181 dispersed
Cone6ag0093 Cone-Chr6:449466 Cone6ag1615 Cone-Chr6:12479507 1.13E-75 dispersed
Cone6ag1615 Cone-Chr6:12479507 Cone8ag0663 Cone-Chr8:6652064 1.13E-146 dispersed
Cone9ag0109 Cone-Chr9:472426 Cone6ag1615 Cone-Chr6:12479507 2.03E-75 dispersed
Cone9ag0505 Cone-Chr9:2417772 Cone6ag1615 Cone-Chr6:12479507 1.20E-84 dispersed
Cone4ag1911 Cone-Chr4:13583060 Cone6ag1615 Cone-Chr6:12479507 1.57E-39 wgd
Cone6ag1615 Cone-Chr6:12479507 Cone7ag1825 Cone-Chr7:11892211 4.33E-38 wgd
Cone6ag1615 Cone-Chr6:12479507 Cone8ag0793 Cone-Chr8:7971620 1.84E-81 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82981 PF10551 MULE 2.40E-19 CL0219 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag1615 - - - 0.0