Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag1619 ATGGCAGGAGGAGATCAAGACCATCTACTTGTACCTTCTATAGTTTCCAAAACTTGTACATTAACTCAACAAGATCATCATCCCCACCAAGATCAACCTCATGAGCATCATCATGTTCTTAACAAATCAATCATTAATTATCATACTACTAATAATAGTAATAATAATCACCAATTATCAACCTTTGATGCTTCTCGGCTTCTGCCTTCTCCCAAAATCCCGAAATCCATCACCCCGATTTCTTCCGCCACCACCGATCTCGAACGTTGTCATCATCATCACCATCACCATCATCATCGTCTTCAGGCTGGCTCGAAGCCCATCCGTAGGCCCAGAGGCCGGCCCGCTGGGTCCAAAAACAAGCCGAAAACTCCCATCATCGTAACGCGTGACAGCGCCAACTCTCTCCGAGCTCACGCAATCGAGGTTAGCTCCGGTTGCGATGTGAACGAGAGTCTAACAAACTTCGCTCGGAGAACAGAACGTGGGATTTCTATACTTAGCGGAAGCGGTTGTGTAACCAATGTCACAATCCGACAACCATCTTCTTCCGGAGCAATTGTTACACTTCACGGCAGGTTCGAGATTCTGTCCTTGGTGGGGTCCATCTTGCCACCTCCAGCCCCACCGGGAATCACTGGAGTTACGATTTATTTGTCGGGCCCACAGGGACAGGTTGTTGGCGGGATTTTGATCGGACAATTGATTGCATCGGGCCCGGTTATGATAATGGCTGCTACATTTATGAACGCTACTTTCGATCGACTTCCATTGGATATTGAGGATGATGAAATTGGAGGTGGAGGGGCATTGCAAAATGGACAGCATTATCAGAATGGGAGGAGCCATCACACCCAGTTTGAAGTGCCGGAACTTTACGGGTTGCCACAGAACCTGATTGCTAATCGGAATCTTCCGCCGGATTGGGTGTCGACTCGAGCTTTGTCCAAGTCTTAA 957 47.86 MAGGDQDHLLVPSIVSKTCTLTQQDHHPHQDQPHEHHHVLNKSIINYHTTNNSNNNHQLSTFDASRLLPSPKIPKSITPISSATTDLERCHHHHHHHHHRLQAGSKPIRRPRGRPAGSKNKPKTPIIVTRDSANSLRAHAIEVSSGCDVNESLTNFARRTERGISILSGSGCVTNVTIRQPSSSGAIVTLHGRFEILSLVGSILPPPAPPGITGVTIYLSGPQGQVVGGILIGQLIASGPVMIMAATFMNATFDRLPLDIEDDEIGGGGALQNGQHYQNGRSHHTQFEVPELYGLPQNLIANRNLPPDWVSTRALSKS 318
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 12498853 12499809 + Conep06aG0168300.1 Cone6ag1619 440503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag1619 318 FunFam AT-hook motif nuclear-localized protein 136 264 - -
Cone6ag1619 318 ProSiteProfiles PPC domain profile profile. 133 273 IPR005175 -
Cone6ag1619 318 MobiDBLite consensus disorder prediction 90 117 - -
Cone6ag1619 318 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 61 278 IPR014476 GO:0003680(InterPro)|GO:0003680(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)
Cone6ag1619 318 Pfam Plants and Prokaryotes Conserved (PCC) domain 137 249 IPR005175 -
Cone6ag1619 318 CDD DUF296 137 248 IPR005175 -
Cone6ag1619 318 SUPERFAMILY AF0104/ALDC/Ptd012-like 133 259 - -
Cone6ag1619 318 Gene3D - 136 264 - -
Cone6ag1619 318 MobiDBLite consensus disorder prediction 87 125 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone6ag1619 Cone-Chr6:12498853 Cone8ag0353 Cone-Chr8:2019529 6.37E-75 dispersed
Cone6ag1619 Cone-Chr6:12498853 Cone9ag1543 Cone-Chr9:11218034 1.92E-172 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag1619 - - - 0.0