Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag1651 ATGACTAATCATTACCAGTCCACAAGCATTCTCTTGCTTCTTTCTCTACTTGCCTTGTTTGCTCCCATTTGCTTTTCATCCAAGTACTCAACTGGTTATCTCTACCCGCAATTTTACGACCATTCTTGCCCCCAAGCTCAGCAAATCGTCAAGTCCGTCCTCGCAAAGGCTTTTGCGAAAGAAGCTCGTATTGCTGCCTCTTTGCTCAGGCTTCATTTCCATGATTGTTTTGTTCAGGGATGTGATGCATCGTTGTTGTTGGATAGCAGTGGCAGCATAACTAGTGAGAAGAGGTCAAATCCTAACAGGAATTCTGCTAGAGGTTTTGAAGTCATTGATGAGATCAAATCTGCTTTAGAGAAGGAGTGCCCTCACACTGTTTCTTGCGCTGATATCTTAGCTTTGGCTGCTAGAGACTCCACTGTCATAACTGGTGGACCCTCCTGGGAGGTTCCACTAGGAAGACGGGACTCAAGAGGGGCAAGTCTAAGCGGCTCTAACAACAACATTCCTGCTCCAAACAACACTTTCCCAACCATTCTTACCAAGTTCAAGCGACAGGGTCTTGACCTTACCGATCTCGTTGCGCTATCCGGGAGTCACACAATTGGAGATGCTAGATGCACAAGCTTCAGACAGAGGCTATACAACCAAACGGGAAACGGTCAACCGGACTTCACTCTGGACCAATCATATGCTGCACAATTGCGGACCCGCTGCCCGAGATCCGGTGGTGATCAGAACCTCTTCTTCTTGGACTTTGTCAGCCCAACAAAGTTTGATAACAATTATTTTAAGAACATCTTAGCTTCAAAAGGCCTACTTAGCTCTGATGAAGTTCTTCTGACCAGCAATGGAGCGTCCGCTCAGCTTGTGAAGACATATGCACAGAATAGCGCCCTTTTCTTCCAGCAGTTTGCTAAGTCCATGGTGAAGATGGGGAATATCTCTCCCTTGACTGGTTCTAGGGGTGAAATCAGGAAGATTTGCAGGAGGATTAACAAAAACTAA 1011 46.19 MTNHYQSTSILLLLSLLALFAPICFSSKYSTGYLYPQFYDHSCPQAQQIVKSVLAKAFAKEARIAASLLRLHFHDCFVQGCDASLLLDSSGSITSEKRSNPNRNSARGFEVIDEIKSALEKECPHTVSCADILALAARDSTVITGGPSWEVPLGRRDSRGASLSGSNNNIPAPNNTFPTILTKFKRQGLDLTDLVALSGSHTIGDARCTSFRQRLYNQTGNGQPDFTLDQSYAAQLRTRCPRSGGDQNLFFLDFVSPTKFDNNYFKNILASKGLLSSDEVLLTSNGASAQLVKTYAQNSALFFQQFAKSMVKMGNISPLTGSRGEIRKICRRINKN 336
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 12612075 12613770 + Conep06aG0171600.1 Cone6ag1651 440535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag1651 336 ProSitePatterns Peroxidases proximal heme-ligand signature. 193 203 IPR019793 -
Cone6ag1651 336 Gene3D Peroxidase, domain 2 171 314 - -
Cone6ag1651 336 PANTHER PEROXIDASE 72-RELATED 13 333 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag1651 336 SUPERFAMILY Heme-dependent peroxidases 34 334 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag1651 336 ProSiteProfiles Plant heme peroxidase family profile. 33 334 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag1651 336 Pfam Peroxidase 50 298 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag1651 336 Gene3D - 38 334 - -
Cone6ag1651 336 PRINTS Plant peroxidase signature 192 204 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag1651 336 PRINTS Plant peroxidase signature 126 136 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag1651 336 PRINTS Plant peroxidase signature 251 266 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag1651 336 PRINTS Plant peroxidase signature 267 284 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag1651 336 PRINTS Plant peroxidase signature 145 160 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag1651 336 PRINTS Plant peroxidase signature 43 62 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag1651 336 PRINTS Plant peroxidase signature 107 120 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag1651 336 PRINTS Plant peroxidase signature 67 87 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag1651 336 PRINTS Plant peroxidase signature 308 321 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag1651 336 FunFam Peroxidase 37 176 - -
Cone6ag1651 336 PRINTS Haem peroxidase superfamily signature 65 79 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag1651 336 PRINTS Haem peroxidase superfamily signature 193 208 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag1651 336 PRINTS Haem peroxidase superfamily signature 253 268 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag1651 336 PRINTS Haem peroxidase superfamily signature 127 144 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag1651 336 PRINTS Haem peroxidase superfamily signature 145 157 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone6ag1651 336 ProSitePatterns Peroxidases active site signature. 65 76 IPR019794 GO:0004601(InterPro)
Cone6ag1651 336 CDD secretory_peroxidase 34 333 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cone6ag1651 336 FunFam Peroxidase 171 313 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag1479 Cone-Chr4:11599858 Cone6ag1651 Cone-Chr6:12612075 1.57E-76 dispersed
Cone5ag1048 Cone-Chr5:4588404 Cone6ag1651 Cone-Chr6:12612075 1.21E-108 dispersed
Cone6ag0495 Cone-Chr6:2463893 Cone6ag1651 Cone-Chr6:12612075 8.76E-87 dispersed
Cone6ag1379 Cone-Chr6:11081891 Cone6ag1651 Cone-Chr6:12612075 7.13E-94 dispersed
Cone6ag1651 Cone-Chr6:12612075 Cone7ag0076 Cone-Chr7:326322 4.14E-93 dispersed
Cone12ag0780 Cone-Chr12:7133940 Cone6ag1651 Cone-Chr6:12612075 9.33E-182 wgd
Cone4ag1937 Cone-Chr4:13681554 Cone6ag1651 Cone-Chr6:12612075 3.63E-141 wgd
Cone6ag1651 Cone-Chr6:12612075 Cone7ag1849 Cone-Chr7:11981829 2.41E-79 wgd
Cone6ag1651 Cone-Chr6:12612075 Cone9ag1575 Cone-Chr9:11337036 6.43E-166 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag1651 K00430 - cit:102620208 548.895