Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone6ag1653 | ATGGCGTGGGTTAATGTGATGATTGGAGGTTTCTGGGTATTGGTAGTAAGTAGTATTACAGTAGGGAGGTATTGGTTTTATCATTATAACAAGAAGGTGAAGAAGATGGAGGCTGATGATGGGATTCCAAGAGGAAGCTTAGGTTGGCCACTGATTGGTGAAACACTTGACTTCATTGCCTCTGGCTACTCTACCCGCCCTGTCTCCTTCATGGACAAACGCAAATCTCTATATGGGAAAGTGTTCAAAACGCATATATTGGGAACACCAATCATAGTGTCCACTGATCCGGAGGTGAACAAGGCCATTCTTCAAAACCATGGGAATATCTTCATCCCGGCTTATCCCAAATCCATCCGGGAATTACTCGGCCCCTACTCCATCCTCCAGACAAACGGAATCATCCAGAAACGCCACCATGCACTCATTGGCAGCTTCCTCCGATCCCCTCTCCTCAAATCTCGTATCACCAAACACATCGAAACCTCCGTCAACCTCACTCTCTCCTCCTGGACGTCCTGTGGCCGCCATCCGCTGATTCATCTCCAGGACGAGACTAAGAACATCACGTTCGAGGTTCTAGTGAAAGTGTTGATGAGTGTGGGTCCAGGTGATGACCTGGACTTCTTGAAGAGAGAGTTCCGGGAGTTCATCAAGGGTTTGATATGTTTGCCGATTAAGCTTCCGGGGACGAGGCTTTATAAATCGTTGAAGGCTAAGGAGAAGATGTTGAAGATGGTGAGGAGGATCGTGGAAGAGAGAATCGTGACACGTGGAGGAGGATTGCCGAAGGGTGATCATAATCCAGTTGTGGACGTGGTGGACGTGCTCTTACAGAATAATTGCGAGTTGTCGGATGAGATGCAACGCCTGCCGTTGGATTTCATCAGCGGGAACATCGTGGAGATGATGATCCCAGGTGAAGAAACCATGCCCACGGCTATGACTTTAGCTGTCAAATTTTTAAGCGACTGCCCCGTTGCGTTAGAGCAGATAAAGGTGGAGAATATGGAATTGAGGAAGCAGAAGGCAGAAACCAGGGAGGAGTATACATGGACAGACTACATGTCGTTGCCATTTACTCAAAATGTGATCAGTGAAACACTCAGGATGGCAAACATAATCAATGGTGTTTGGAGAAAAGCTCTAAAAGATGTAGAGATCAAAGGTAATTTGATACCAGAAGGTTGGTGCGTTATGGCATGTTTTGCTTCAGTGCATATGGATGAAGAGAATTACGCAAATCCATATCAGTTTGATCCATGGAGATGGGAGAAAATGGGAGCTACCAGTAGCAACAACAATACCTTAACACCGTTTGGAGGGGGACAAAGGCTATGCCCTGGTTTAGAACTATCCAGGCTTGAAATCTCCATCTTCCTTCATCATCTTCTTACCATTTACAAATGGGTTGCGGAGAAGGATGAAATTATTTACTTTCCAACGGTTCAGATGAAGAGAAAGCTACCCATCGTAGTCACACCCTTATAA | 1491 | 45.94 | MAWVNVMIGGFWVLVVSSITVGRYWFYHYNKKVKKMEADDGIPRGSLGWPLIGETLDFIASGYSTRPVSFMDKRKSLYGKVFKTHILGTPIIVSTDPEVNKAILQNHGNIFIPAYPKSIRELLGPYSILQTNGIIQKRHHALIGSFLRSPLLKSRITKHIETSVNLTLSSWTSCGRHPLIHLQDETKNITFEVLVKVLMSVGPGDDLDFLKREFREFIKGLICLPIKLPGTRLYKSLKAKEKMLKMVRRIVEERIVTRGGGLPKGDHNPVVDVVDVLLQNNCELSDEMQRLPLDFISGNIVEMMIPGEETMPTAMTLAVKFLSDCPVALEQIKVENMELRKQKAETREEYTWTDYMSLPFTQNVISETLRMANIINGVWRKALKDVEIKGNLIPEGWCVMACFASVHMDEENYANPYQFDPWRWEKMGATSSNNNTLTPFGGGQRLCPGLELSRLEISIFLHHLLTIYKWVAEKDEIIYFPTVQMKRKLPIVVTPL | 496 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 12616615 | 12625449 | + | Conep06aG0171800.1 | Cone6ag1653 | 440537 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone6ag1653 | 496 | Gene3D | Cytochrome P450 | 32 | 495 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag1653 | 496 | Coils | Coil | 327 | 349 | - | - | |
| Cone6ag1653 | 496 | SUPERFAMILY | Cytochrome P450 | 42 | 495 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag1653 | 496 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 440 | 449 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cone6ag1653 | 496 | FunFam | 3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 | 32 | 496 | - | - | |
| Cone6ag1653 | 496 | PRINTS | E-class P450 group IV signature | 407 | 425 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag1653 | 496 | PRINTS | E-class P450 group IV signature | 358 | 374 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag1653 | 496 | PRINTS | E-class P450 group IV signature | 69 | 92 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag1653 | 496 | PRINTS | E-class P450 group IV signature | 447 | 465 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag1653 | 496 | PRINTS | E-class P450 group IV signature | 431 | 447 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag1653 | 496 | CDD | CYP90-like | 74 | 495 | - | - | |
| Cone6ag1653 | 496 | PRINTS | P450 superfamily signature | 306 | 323 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag1653 | 496 | PRINTS | P450 superfamily signature | 363 | 374 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag1653 | 496 | PRINTS | P450 superfamily signature | 447 | 458 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag1653 | 496 | PRINTS | P450 superfamily signature | 438 | 447 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone6ag1653 | 496 | PANTHER | CYTOCHROME P450 26 | 42 | 468 | - | GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER)|GO:0016709(PANTHER) | |
| Cone6ag1653 | 496 | Pfam | Cytochrome P450 | 43 | 475 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone20ag1300 | Cone-Chr20:8462824 | Cone6ag1653 | Cone-Chr6:12616615 | 1.25E-166 | dispersed | |
| Cone6ag1653 | Cone-Chr6:12616615 | Cone8ag0806 | Cone-Chr8:8116467 | 1.18E-92 | dispersed | |
| Cone6ag1653 | Cone-Chr6:12616615 | Cone9ag1578 | Cone-Chr9:11342020 | 1.01e-316 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone6ag1653 | K12637 | - | cit:102623590 | 687.182 |