Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag1653 ATGGCGTGGGTTAATGTGATGATTGGAGGTTTCTGGGTATTGGTAGTAAGTAGTATTACAGTAGGGAGGTATTGGTTTTATCATTATAACAAGAAGGTGAAGAAGATGGAGGCTGATGATGGGATTCCAAGAGGAAGCTTAGGTTGGCCACTGATTGGTGAAACACTTGACTTCATTGCCTCTGGCTACTCTACCCGCCCTGTCTCCTTCATGGACAAACGCAAATCTCTATATGGGAAAGTGTTCAAAACGCATATATTGGGAACACCAATCATAGTGTCCACTGATCCGGAGGTGAACAAGGCCATTCTTCAAAACCATGGGAATATCTTCATCCCGGCTTATCCCAAATCCATCCGGGAATTACTCGGCCCCTACTCCATCCTCCAGACAAACGGAATCATCCAGAAACGCCACCATGCACTCATTGGCAGCTTCCTCCGATCCCCTCTCCTCAAATCTCGTATCACCAAACACATCGAAACCTCCGTCAACCTCACTCTCTCCTCCTGGACGTCCTGTGGCCGCCATCCGCTGATTCATCTCCAGGACGAGACTAAGAACATCACGTTCGAGGTTCTAGTGAAAGTGTTGATGAGTGTGGGTCCAGGTGATGACCTGGACTTCTTGAAGAGAGAGTTCCGGGAGTTCATCAAGGGTTTGATATGTTTGCCGATTAAGCTTCCGGGGACGAGGCTTTATAAATCGTTGAAGGCTAAGGAGAAGATGTTGAAGATGGTGAGGAGGATCGTGGAAGAGAGAATCGTGACACGTGGAGGAGGATTGCCGAAGGGTGATCATAATCCAGTTGTGGACGTGGTGGACGTGCTCTTACAGAATAATTGCGAGTTGTCGGATGAGATGCAACGCCTGCCGTTGGATTTCATCAGCGGGAACATCGTGGAGATGATGATCCCAGGTGAAGAAACCATGCCCACGGCTATGACTTTAGCTGTCAAATTTTTAAGCGACTGCCCCGTTGCGTTAGAGCAGATAAAGGTGGAGAATATGGAATTGAGGAAGCAGAAGGCAGAAACCAGGGAGGAGTATACATGGACAGACTACATGTCGTTGCCATTTACTCAAAATGTGATCAGTGAAACACTCAGGATGGCAAACATAATCAATGGTGTTTGGAGAAAAGCTCTAAAAGATGTAGAGATCAAAGGTAATTTGATACCAGAAGGTTGGTGCGTTATGGCATGTTTTGCTTCAGTGCATATGGATGAAGAGAATTACGCAAATCCATATCAGTTTGATCCATGGAGATGGGAGAAAATGGGAGCTACCAGTAGCAACAACAATACCTTAACACCGTTTGGAGGGGGACAAAGGCTATGCCCTGGTTTAGAACTATCCAGGCTTGAAATCTCCATCTTCCTTCATCATCTTCTTACCATTTACAAATGGGTTGCGGAGAAGGATGAAATTATTTACTTTCCAACGGTTCAGATGAAGAGAAAGCTACCCATCGTAGTCACACCCTTATAA 1491 45.94 MAWVNVMIGGFWVLVVSSITVGRYWFYHYNKKVKKMEADDGIPRGSLGWPLIGETLDFIASGYSTRPVSFMDKRKSLYGKVFKTHILGTPIIVSTDPEVNKAILQNHGNIFIPAYPKSIRELLGPYSILQTNGIIQKRHHALIGSFLRSPLLKSRITKHIETSVNLTLSSWTSCGRHPLIHLQDETKNITFEVLVKVLMSVGPGDDLDFLKREFREFIKGLICLPIKLPGTRLYKSLKAKEKMLKMVRRIVEERIVTRGGGLPKGDHNPVVDVVDVLLQNNCELSDEMQRLPLDFISGNIVEMMIPGEETMPTAMTLAVKFLSDCPVALEQIKVENMELRKQKAETREEYTWTDYMSLPFTQNVISETLRMANIINGVWRKALKDVEIKGNLIPEGWCVMACFASVHMDEENYANPYQFDPWRWEKMGATSSNNNTLTPFGGGQRLCPGLELSRLEISIFLHHLLTIYKWVAEKDEIIYFPTVQMKRKLPIVVTPL 496
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 12616615 12625449 + Conep06aG0171800.1 Cone6ag1653 440537
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag1653 496 Gene3D Cytochrome P450 32 495 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone6ag1653 496 Coils Coil 327 349 - -
Cone6ag1653 496 SUPERFAMILY Cytochrome P450 42 495 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone6ag1653 496 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cone6ag1653 496 FunFam 3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 32 496 - -
Cone6ag1653 496 PRINTS E-class P450 group IV signature 407 425 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone6ag1653 496 PRINTS E-class P450 group IV signature 358 374 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone6ag1653 496 PRINTS E-class P450 group IV signature 69 92 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone6ag1653 496 PRINTS E-class P450 group IV signature 447 465 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone6ag1653 496 PRINTS E-class P450 group IV signature 431 447 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone6ag1653 496 CDD CYP90-like 74 495 - -
Cone6ag1653 496 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone6ag1653 496 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone6ag1653 496 PRINTS P450 superfamily signature 447 458 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone6ag1653 496 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone6ag1653 496 PANTHER CYTOCHROME P450 26 42 468 - GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER)|GO:0016709(PANTHER)
Cone6ag1653 496 Pfam Cytochrome P450 43 475 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone20ag1300 Cone-Chr20:8462824 Cone6ag1653 Cone-Chr6:12616615 1.25E-166 dispersed
Cone6ag1653 Cone-Chr6:12616615 Cone8ag0806 Cone-Chr8:8116467 1.18E-92 dispersed
Cone6ag1653 Cone-Chr6:12616615 Cone9ag1578 Cone-Chr9:11342020 1.01e-316 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag1653 K12637 - cit:102623590 687.182