Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag1661 ATGGAAGAAATAAGTATGGATGAGCTGAATCGAGAATTCAGAAGTGGAAGAACAAGAAGTGTGGAGTGGAGGAAGAAGCAGCTTAATGCTCTGCTTCAATTTGTTCACGACAATGAAGACAACATCTTTCAGGCTCTTTATCAAGATCTTGGAAAGCACTCTGTAGAAGCTTATCGCGATGAGATTGGAGTAGTGGAAAAGGCAGCAAAGCATACTTTGTGTTCTTTAGACAAATGGATGGCTCCGAAGAAGAGTCATGTTCCATTGCTCTTCTTCCCTGCAAGAGGAGAAGTATTGCCCGAGCCATTCGGCCTAGTACTCATCTTTGGATCTTGGAACTTCCCCATTTCCTTGAGTTTGGACCCATTAATCGGAGCGATATCAGCCGGAAATGTAGTGGTCTTAAAGCTGTCCGATCAATCTCCGGCATGTTCTTCTATTCTGGCCAACACTCTCCCTCTTTACTTGGATTGCAAAGCAATTAAGCTTGTTCAAGGTGGACTGGAAATAAATGAACAACTTCTTCAACTCAAATGGGATAAAATTTTCTTCACTGGAAGTCCACGAGTCGGCCGGATTGTGATGTCAGCAGCGGCAATGCACTTGACTCCGGTTACTCTTGAGCTTGGCGGGAAATGCCCTACCATCTTGGATTCTCTTTCCCTTAATTCATTTGATCTTAAGGTGGCAGTGAAGAGAATTGCCAGCGGGAAGTGGGGCCCGTGTTGCGGGCAGGCATGTATAGGAATAGACTATGTGTTGGTTCATGACCAGTGTGCTTCTACTCTGATAGAATTATTAAAGGGACCAGTGAAGAAATTCTACGGCGAAAACCCGAGAAACTCGAACAGCATAGCTAGAATTGTAAACAAGCAACAGTTTGAAAGACTCTGTAATCTTCTTAAAGATCCTCGTGTTGCTGCTTCCGTTGTCCATGGTGGTTCATTTGATGAAGAAAAACTGTTTATCGAGCCAACGATATTGTTAGATCCTCCTCTTGATTCCGACATCATGACAGAAGAGATTTTCGGTCCTCTACTTCCGATAATCACGCTGAATAACATTCATGATAGCATTGAGTTTATAAATTCAAGACCCAAACCTCTTGCCATCTATGCCTTCACAAAAGATGAAGCCTTAAAGAGTCGGGTTTTATCCGAAACATCGTCGGGAAGTGTGACATTCAACGACGTTATGATCCAATATGTATGCGATGGATTACCGTTCGGAGGAGTAGGCCAGAGCGGGTTCGGAAGGTACCATGGAAAGTATTCATTCGATACATTTACCCATGAAAAGGCGGTTATGCGAAGACACTTCTTTCCCGAGCTAGAAGCGAGGTATCCTCCATGGAATGAGTACAAGATGAAGTTTATCAGATTGGGATACAGTTTTGATTACTTTGGGCTGATCCTCCTCCTTTTGGGGTTGAAAAGATAA 1440 43.4 MEEISMDELNREFRSGRTRSVEWRKKQLNALLQFVHDNEDNIFQALYQDLGKHSVEAYRDEIGVVEKAAKHTLCSLDKWMAPKKSHVPLLFFPARGEVLPEPFGLVLIFGSWNFPISLSLDPLIGAISAGNVVVLKLSDQSPACSSILANTLPLYLDCKAIKLVQGGLEINEQLLQLKWDKIFFTGSPRVGRIVMSAAAMHLTPVTLELGGKCPTILDSLSLNSFDLKVAVKRIASGKWGPCCGQACIGIDYVLVHDQCASTLIELLKGPVKKFYGENPRNSNSIARIVNKQQFERLCNLLKDPRVAASVVHGGSFDEEKLFIEPTILLDPPLDSDIMTEEIFGPLLPIITLNNIHDSIEFINSRPKPLAIYAFTKDEALKSRVLSETSSGSVTFNDVMIQYVCDGLPFGGVGQSGFGRYHGKYSFDTFTHEKAVMRRHFFPELEARYPPWNEYKMKFIRLGYSFDYFGLILLLLGLKR 479
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 12657126 12660319 - Conep06aG0172600.1 Cone6ag1661 440545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag1661 479 PANTHER ALDEHYDE DEHYDROGENASE 6 476 IPR012394 GO:0004029(PANTHER)|GO:0005737(PANTHER)|GO:0006081(InterPro)|GO:0006081(PANTHER)
Cone6ag1661 479 FunFam Aldehyde dehydrogenase 10 214 - -
Cone6ag1661 479 SUPERFAMILY ALDH-like 11 450 IPR016161 GO:0016491(InterPro)
Cone6ag1661 479 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 211 415 IPR016163 GO:0016620(InterPro)
Cone6ag1661 479 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 12 433 IPR016162 GO:0016491(InterPro)
Cone6ag1661 479 FunFam Aldehyde dehydrogenase 211 415 - -
Cone6ag1661 479 Pfam Aldehyde dehydrogenase family 12 435 IPR015590 GO:0016491(InterPro)
Cone6ag1661 479 PIRSF ALDH 1 470 IPR012394 GO:0006081(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag0445 Cone-Chr1:4025165 Cone6ag1661 Cone-Chr6:12657126 3.21E-59 dispersed
Cone4ag1417 Cone-Chr4:11327271 Cone6ag1661 Cone-Chr6:12657126 2.30E-153 dispersed
Cone6ag1237 Cone-Chr6:9852226 Cone6ag1661 Cone-Chr6:12657126 7.96E-149 dispersed
Cone6ag1661 Cone-Chr6:12657126 Cone7ag1521 Cone-Chr7:10561375 9.74E-160 dispersed
Cone6ag1661 Cone-Chr6:12657126 Cone5ag1440 Cone-Chr5:9257318 5.91E-193 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag1661 K00128 - vvi:100247106 714.531