Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone6ag1697 ATGGGTCTTTGCCTTGGATCTCCAGCTCATCCTTCTCTTCCTGCTCCTTCTACTATTCCAGGTGCTTCCAGCAGTAGTAGCTGTAAGAACATCGGATTTTCAGGCACCAGTAGCAGCGCCGGCAAAAGCCTATTCTCAGAGGCAGGAACCAGTTCAAGCCTGCAAGAGGATCTACAACGACAGCAACATGCAAATGGTCTAATCCTGGAGTCTCCCGATTTGAGGGTCTTTACTTTCTCAGAGCTCAAAACTGCAACTAAGAACTTCAAGAATGATACCATGCTGGGCGTCGGAGGATTTGGGAAAGTGTACAAGGGCTGGCTGGATGAACTCACCCTTGCTCCTTCCAAGACTAGTACTGGCATGGTCGTTGCTATTAAGAAATTGAACCCAGAAAGTGTTCAAGGTTTCAGAGAGTGGCAGTCAGAAGTGAACTTTCTAGGGCGGGTTTCTCATCCGAACCTTGTCAGGTTATTGGGATACTGTGGAGAGGACAACGAGTTGCTTCTTGTGTACGAGTTCATGCCAAAGGGAAGCTTGGAGAATCATCTTTTTAGAAGAAATGGACCGCTTTCTTGGGAGAAACGGCTGAAAATAGCTCTTGGAGCAGCTCGGGGTTTGGCCTTCTTGCATGCCTCAGAAAGACAAGTTATACACAGAGATTTTAAAGCATCGAATATACTGCTGGATGGGGACTACAATGCAAAACTCTCGGATTTTGGACTTGCCAAATTGGGGCCTGATGGGGGAGACTCGCATGTCTCCACCAGAATTATGGGCACATATGTTTACGTTGCCCCTGAATACATTGCTACAGGTCATTTGTATGTGAAGAGTGATGTGTATGGGTATGGAGTTGTGCTGCTTGAATTGCTGACCGGCTTACGAGCATCTGATCCGAATCGACCTGACGAGCAGCAAAACCTTGTGGAGTGGGCTAAACCCATCATTAAGAGGAAAAAGATGAAAACAATTATGGATACTCGGATTGAAGGGCAGTACTCTTCCAAGGCAGCATTACAAGCAGCAGAGCTTGTTAAAAAATGCCTAGAATCAGATCCTAAACATCGACCCACCATGAAAGATGTTGTGGAAGCATTGGAAAGGATAGAAGCGATGGAAAAACCTTAA 1131 46.15 MGLCLGSPAHPSLPAPSTIPGASSSSSCKNIGFSGTSSSAGKSLFSEAGTSSSLQEDLQRQQHANGLILESPDLRVFTFSELKTATKNFKNDTMLGVGGFGKVYKGWLDELTLAPSKTSTGMVVAIKKLNPESVQGFREWQSEVNFLGRVSHPNLVRLLGYCGEDNELLLVYEFMPKGSLENHLFRRNGPLSWEKRLKIALGAARGLAFLHASERQVIHRDFKASNILLDGDYNAKLSDFGLAKLGPDGGDSHVSTRIMGTYVYVAPEYIATGHLYVKSDVYGYGVVLLELLTGLRASDPNRPDEQQNLVEWAKPIIKRKKMKTIMDTRIEGQYSSKAALQAAELVKKCLESDPKHRPTMKDVVEALERIEAMEKP 376
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 12817405 12819906 + Conep06aG0176200.1 Cone6ag1697 440581

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone6ag1697 376 Gene3D Transferase(Phosphotransferase) domain 1 175 375 - -
Cone6ag1697 376 Gene3D Phosphorylase Kinase; domain 1 59 174 - -
Cone6ag1697 376 Pfam Protein tyrosine and serine/threonine kinase 91 367 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone6ag1697 376 PANTHER OS01G0588500 PROTEIN-RELATED 62 371 IPR050823 -
Cone6ag1697 376 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 175 376 - -
Cone6ag1697 376 MobiDBLite consensus disorder prediction 1 21 - -
Cone6ag1697 376 FunFam Serine/threonine-protein kinase BIK1 56 174 - -
Cone6ag1697 376 CDD STKc_IRAK 95 370 - -
Cone6ag1697 376 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone6ag1697 376 ProSiteProfiles Protein kinase domain profile. 89 370 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone6ag1697 376 SUPERFAMILY Protein kinase-like (PK-like) 73 365 IPR011009 -
Cone6ag1697 376 ProSitePatterns Protein kinases ATP-binding region signature. 95 128 IPR017441 GO:0005524(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone6ag1697 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0863 Cone-Chr12:7728467 Cone6ag1697 Cone-Chr6:12817405 3.18E-84 dispersed
Cone6ag1697 Cone-Chr6:12817405 Cone8ag0892 Cone-Chr8:8700114 1.64E-155 dispersed
Cone12ag0862 Cone-Chr12:7722427 Cone6ag1697 Cone-Chr6:12817405 1.32E-34 wgd
Cone6ag1697 Cone-Chr6:12817405 Cone8ag0871 Cone-Chr8:8581323 2.20E-64 wgd
Cone6ag1697 Cone-Chr6:12817405 Cone9ag1621 Cone-Chr9:11559669 3.71E-231 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g1189 Blo04g00863 . . . Bpe15g00497 Bpe13g00391 . . . . . . . . . . . . . . . . . . . . . . . . . Cone8ag0892 . Cone6ag1697 Cone9ag1621 . . . . . . . . . . Bma03g00931 Bma06g00077 . . . Cma16g01278 . . . . . . . . . . . . . . . . . . . . . . .
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82984 None None None None Cone PK