Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag0013 ATGGCCCAAGCTGATGCTACTGCCTCTCTTCAGTCTATCTGCTACAAACGAGGTTCACTGCGCCTCCTCGACCAGAGAAAGCTCCCTCTGGAAACTACTTATTTGGACATACATGATGCTTCTGATGGATGGCACGCAATAAAAGATATGGTAGTCCGTGGGGCACCTGCTATTGCTATTGCTGCAGCTCTTTCTCTGGCCGTAGAAGTCTCTAAATTTGATAGTTTTGATGGCACTTCTGATGATGCAGCTGATTTCCTTGGTACCAAATTGGACTATCTCGTCTCCAGCCGGCCGACTGCTGTGAATCTTTCTGATGCAGCTACTAAACTCAAACAAATTGTATCAGAGGCCGCTGCAACTGCTTCAGAAGGCAGGGGTGTTTTTCAAGCATATGTAGAAGCTGCCGAAATAATGCTGAAGGATGATGTTGCTTCGAACAAAGCAATCGGGTCTTTTGGAGCAACCTTTATTCTGAATCAGCAAAAGGACACTAACAGGCTTTCAGTTCTTACCCATTGCAACACTGGCAGTCTTGCAACAGCTGGATATGGTACTGCTCTTGGGGTAATACGTGCACTTCATTCTCAAGGAGTCCTAGAGAGGGCCTATTGCACGGAAACACGCCCATTCAATCAAGGCTCCAGACTCACGGCATATGAGTTGGTCCATGAAAACATACCTGCTACTCTTATAGCGGATTCTGCTGCAGCTGCACTCATGAAAGATAAGGATCTGCATGCTGTGATTGTTGGAGCTGATCGTGTGGCTGCCAATGGTGACACTGCTAACAAGATTGGAACCTACAGTCTTGCATTGAGTGCAATGCATCATAAAATCCCCTTCTTTGTTGCTGCACCCCTGACCTCAATAGACCTGTCCCTTTCAAATGGGCAAGAAATTATTATCGAGGAAAGGTCAGCAAAGGAGTTGTTGAACTCGAAAGGAGGCCTTGGGGAGCAAGTGGCGGCATCGGGTATATCTGTGTGGAACCCAGCTTTTGACGTGACACCCTCTAATTTAATATTTGGAATCATCACAGAGAAGGGTGTGATTACAAAGACGGGTGCGGATACTTTCAACATTAAGGAATTCATAGAGAAGACTGTCAGGCAGCATCCCGCTTAG 1128 46.45 MAQADATASLQSICYKRGSLRLLDQRKLPLETTYLDIHDASDGWHAIKDMVVRGAPAIAIAAALSLAVEVSKFDSFDGTSDDAADFLGTKLDYLVSSRPTAVNLSDAATKLKQIVSEAAATASEGRGVFQAYVEAAEIMLKDDVASNKAIGSFGATFILNQQKDTNRLSVLTHCNTGSLATAGYGTALGVIRALHSQGVLERAYCTETRPFNQGSRLTAYELVHENIPATLIADSAAAALMKDKDLHAVIVGADRVAANGDTANKIGTYSLALSAMHHKIPFFVAAPLTSIDLSLSNGQEIIIEERSAKELLNSKGGLGEQVAASGISVWNPAFDVTPSNLIFGIITEKGVITKTGADTFNIKEFIEKTVRQHPA 375
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 70436 73096 + Conep07aG0001300.1 Cone7ag0013 440609
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag0013 375 Gene3D - 8 200 IPR027363 -
Cone7ag0013 375 Gene3D - 201 366 IPR042529 -
Cone7ag0013 375 FunFam Methylthioribose-1-phosphate isomerase 8 200 - -
Cone7ag0013 375 SUPERFAMILY NagB/RpiA/CoA transferase-like 10 356 IPR037171 -
Cone7ag0013 375 NCBIfam S-methyl-5-thioribose-1-phosphate isomerase 11 354 IPR005251 -
Cone7ag0013 375 NCBIfam S-methyl-5-thioribose-1-phosphate isomerase 37 354 IPR011559 GO:0044249(InterPro)
Cone7ag0013 375 Hamap Putative methylthioribose-1-phosphate isomerase [mtnA]. 10 362 IPR005251 -
Cone7ag0013 375 PANTHER METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE 8 369 - GO:0019509(PANTHER)|GO:0046523(PANTHER)
Cone7ag0013 375 FunFam Methylthioribose-1-phosphate isomerase 166 363 - -
Cone7ag0013 375 Pfam Initiation factor 2 subunit family 52 353 IPR000649 GO:0044237(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag0008 Cone-Chr4:56389 Cone7ag0013 Cone-Chr7:70436 1.40E-128 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag0013 K08963 - csv:101210526 549.666