Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag0046 ATGAAGAAGGGAGGCTTAAACCCTGGCCTGAAGCTCAGTCTTCCTCCTCCCGATGAAGTTTCCTTCGCCAAGTTCCTAACTCAGAGCGGAACGTTTATGGATGGCGATCTGCTTGTTGGAAGGAATGGCGTCCGAATCGTCTCTCAGAGCGAAGTAGAAGCTCCACCTCCACCAATTAATCCCTCGGACAACCAGCTGAGCTTAGCAGATTTAGATGCGATCAAAGTTATTGGAAAAGGAAATGGTGGAATCGTACAGTTGGTGCAACACAAGTGGACTCGTCAATTTTTTGCATTAAAGGTAATTCAAATGAATGTTGAGGAGTCTTATCGCAAGCAGCTTGGACAAGAACTGAAAATTAATCAATCATCACAGTGCCCATATGTTGTAGTCTGTTATCAGTCTTTCTATGAAAATGGTGCAATTTCCATCATCTTAGAGTACATGGATGGGGGATCTCTAGCAGATTTTCTGAAAAAAGTGAAGAACGTACCAGAGCAATATCTCGCTGGTATTTGTAAACAGGTGCTCCATGGGTTAGTCTACCTTCATCATGAAAAGCATATCATTCACAGAGACCTAAAGCCTTCTAATCTGCTAATAAATCATAGAGGAGAAGTCAAGATTACCGACTTTGGTGTCAGTGCCATAATGGCAAGTACCTCTGGACAGGCAAATACTTTTGTTGGCACATACAACTATATGTCTCCAGAGAGAATTATTGGAAACAACTATGACAACAAAAGTGATATATGGAGCTTGGGATTGGTATTGCTTGAGTGTGCAACAGGTCAATTTCCCTACCTTCCCCCTGAGAAAGATGAAGGATGGGTCAACTTTTATGAGCTTATGGAAGCCATTGTTGAACAACCACCACCAACGCCTCCTTCTAACCAGTTTTCTCAAGAATTCTGCTCATTTATCACTGCATGCTTACAGAAGAACCCAAGTGATAGACCCTCGGCACGTGAGCTATTGGCACATCCATTCATCAATAACTTTAAAGAAGAGTCAAATGATCTAGCATCTTACTTCACAAATGCAGGATCTCCGTTAGCAACATTCTAA 1068 42.13 MKKGGLNPGLKLSLPPPDEVSFAKFLTQSGTFMDGDLLVGRNGVRIVSQSEVEAPPPPINPSDNQLSLADLDAIKVIGKGNGGIVQLVQHKWTRQFFALKVIQMNVEESYRKQLGQELKINQSSQCPYVVVCYQSFYENGAISIILEYMDGGSLADFLKKVKNVPEQYLAGICKQVLHGLVYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERIIGNNYDNKSDIWSLGLVLLECATGQFPYLPPEKDEGWVNFYELMEAIVEQPPPTPPSNQFSQEFCSFITACLQKNPSDRPSARELLAHPFINNFKEESNDLASYFTNAGSPLATF 355
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 199505 202522 + Conep07aG0004600.1 Cone7ag0046 440642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag0046 355 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone7ag0046 355 Pfam Protein kinase domain 74 331 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag0046 355 SMART serkin_6 71 331 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag0046 355 Gene3D Transferase(Phosphotransferase) domain 1 151 351 - -
Cone7ag0046 355 Gene3D Phosphorylase Kinase; domain 1 56 150 - -
Cone7ag0046 355 PANTHER DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED 24 351 - GO:0000165(PANTHER)|GO:0004708(PANTHER)
Cone7ag0046 355 FunFam Mitogen-activated protein kinase kinase 6 152 350 - -
Cone7ag0046 355 PRINTS Tyrosine kinase catalytic domain signature 146 159 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone7ag0046 355 PRINTS Tyrosine kinase catalytic domain signature 183 201 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone7ag0046 355 PRINTS Tyrosine kinase catalytic domain signature 249 271 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone7ag0046 355 FunFam Mitogen-activated protein kinase kinase 6 40 150 - -
Cone7ag0046 355 ProSitePatterns Protein kinases ATP-binding region signature. 77 100 IPR017441 GO:0005524(InterPro)
Cone7ag0046 355 CDD PKc_MAPKK_plant_like 69 336 - -
Cone7ag0046 355 ProSiteProfiles Protein kinase domain profile. 71 331 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag0046 355 SUPERFAMILY Protein kinase-like (PK-like) 51 336 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0698 Cone-Chr10:3519546 Cone7ag0046 Cone-Chr7:199505 8.85E-75 dispersed
Cone7ag0046 Cone-Chr7:199505 Cone7ag1164 Cone-Chr7:8676600 8.26E-150 dispersed
Cone15ag0687 Cone-Chr15:3700415 Cone7ag0046 Cone-Chr7:199505 4.76E-21 wgd
Cone4ag0048 Cone-Chr4:242138 Cone7ag0046 Cone-Chr7:199505 5.07E-257 wgd
Cone7ag0046 Cone-Chr7:199505 Cone7ag0750 Cone-Chr7:4589460 4.29E-191 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82988 PF00249 Myb_DNA-binding 4.80E-16 CL0123 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag0046 K20603 - cit:102625262 575.859