Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone7ag0046 | ATGAAGAAGGGAGGCTTAAACCCTGGCCTGAAGCTCAGTCTTCCTCCTCCCGATGAAGTTTCCTTCGCCAAGTTCCTAACTCAGAGCGGAACGTTTATGGATGGCGATCTGCTTGTTGGAAGGAATGGCGTCCGAATCGTCTCTCAGAGCGAAGTAGAAGCTCCACCTCCACCAATTAATCCCTCGGACAACCAGCTGAGCTTAGCAGATTTAGATGCGATCAAAGTTATTGGAAAAGGAAATGGTGGAATCGTACAGTTGGTGCAACACAAGTGGACTCGTCAATTTTTTGCATTAAAGGTAATTCAAATGAATGTTGAGGAGTCTTATCGCAAGCAGCTTGGACAAGAACTGAAAATTAATCAATCATCACAGTGCCCATATGTTGTAGTCTGTTATCAGTCTTTCTATGAAAATGGTGCAATTTCCATCATCTTAGAGTACATGGATGGGGGATCTCTAGCAGATTTTCTGAAAAAAGTGAAGAACGTACCAGAGCAATATCTCGCTGGTATTTGTAAACAGGTGCTCCATGGGTTAGTCTACCTTCATCATGAAAAGCATATCATTCACAGAGACCTAAAGCCTTCTAATCTGCTAATAAATCATAGAGGAGAAGTCAAGATTACCGACTTTGGTGTCAGTGCCATAATGGCAAGTACCTCTGGACAGGCAAATACTTTTGTTGGCACATACAACTATATGTCTCCAGAGAGAATTATTGGAAACAACTATGACAACAAAAGTGATATATGGAGCTTGGGATTGGTATTGCTTGAGTGTGCAACAGGTCAATTTCCCTACCTTCCCCCTGAGAAAGATGAAGGATGGGTCAACTTTTATGAGCTTATGGAAGCCATTGTTGAACAACCACCACCAACGCCTCCTTCTAACCAGTTTTCTCAAGAATTCTGCTCATTTATCACTGCATGCTTACAGAAGAACCCAAGTGATAGACCCTCGGCACGTGAGCTATTGGCACATCCATTCATCAATAACTTTAAAGAAGAGTCAAATGATCTAGCATCTTACTTCACAAATGCAGGATCTCCGTTAGCAACATTCTAA | 1068 | 42.13 | MKKGGLNPGLKLSLPPPDEVSFAKFLTQSGTFMDGDLLVGRNGVRIVSQSEVEAPPPPINPSDNQLSLADLDAIKVIGKGNGGIVQLVQHKWTRQFFALKVIQMNVEESYRKQLGQELKINQSSQCPYVVVCYQSFYENGAISIILEYMDGGSLADFLKKVKNVPEQYLAGICKQVLHGLVYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGQANTFVGTYNYMSPERIIGNNYDNKSDIWSLGLVLLECATGQFPYLPPEKDEGWVNFYELMEAIVEQPPPTPPSNQFSQEFCSFITACLQKNPSDRPSARELLAHPFINNFKEESNDLASYFTNAGSPLATF | 355 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 199505 | 202522 | + | Conep07aG0004600.1 | Cone7ag0046 | 440642 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone7ag0046 | 355 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 189 | 201 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone7ag0046 | 355 | Pfam | Protein kinase domain | 74 | 331 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone7ag0046 | 355 | SMART | serkin_6 | 71 | 331 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone7ag0046 | 355 | Gene3D | Transferase(Phosphotransferase) domain 1 | 151 | 351 | - | - | |
Cone7ag0046 | 355 | Gene3D | Phosphorylase Kinase; domain 1 | 56 | 150 | - | - | |
Cone7ag0046 | 355 | PANTHER | DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED | 24 | 351 | - | GO:0000165(PANTHER)|GO:0004708(PANTHER) | |
Cone7ag0046 | 355 | FunFam | Mitogen-activated protein kinase kinase 6 | 152 | 350 | - | - | |
Cone7ag0046 | 355 | PRINTS | Tyrosine kinase catalytic domain signature | 146 | 159 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone7ag0046 | 355 | PRINTS | Tyrosine kinase catalytic domain signature | 183 | 201 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone7ag0046 | 355 | PRINTS | Tyrosine kinase catalytic domain signature | 249 | 271 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone7ag0046 | 355 | FunFam | Mitogen-activated protein kinase kinase 6 | 40 | 150 | - | - | |
Cone7ag0046 | 355 | ProSitePatterns | Protein kinases ATP-binding region signature. | 77 | 100 | IPR017441 | GO:0005524(InterPro) | |
Cone7ag0046 | 355 | CDD | PKc_MAPKK_plant_like | 69 | 336 | - | - | |
Cone7ag0046 | 355 | ProSiteProfiles | Protein kinase domain profile. | 71 | 331 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone7ag0046 | 355 | SUPERFAMILY | Protein kinase-like (PK-like) | 51 | 336 | IPR011009 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone10ag0698 | Cone-Chr10:3519546 | Cone7ag0046 | Cone-Chr7:199505 | 8.85E-75 | dispersed | |
Cone7ag0046 | Cone-Chr7:199505 | Cone7ag1164 | Cone-Chr7:8676600 | 8.26E-150 | dispersed | |
Cone15ag0687 | Cone-Chr15:3700415 | Cone7ag0046 | Cone-Chr7:199505 | 4.76E-21 | wgd | |
Cone4ag0048 | Cone-Chr4:242138 | Cone7ag0046 | Cone-Chr7:199505 | 5.07E-257 | wgd | |
Cone7ag0046 | Cone-Chr7:199505 | Cone7ag0750 | Cone-Chr7:4589460 | 4.29E-191 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
82988 | PF00249 | Myb_DNA-binding | 4.80E-16 | CL0123 | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone7ag0046 | K20603 | - | cit:102625262 | 575.859 |