Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag0053 ATGACTTGCTCCGTCGCCGTTTCGAGCTCTCCAAGCTTTTCTCCATCTTCGTCACTCTTCTGCAGCAAATCCATTATCTCTCCTTCGCACGAGGCGCTAACCCTAACATTAGGCCACTTAAAGTCCTCGAAATCGTCGTCTTCGCCCTGCTCTTCAGCTCCATCTTCGCCTTCTTCGCCTTTTCGGCTCCGCCGTCCGAAACCACCATATGTAATTTCTTCTTTTGTTTCTTCTTCCAATTCGACTCAGGCTCCATCTCCGGTCCCGCTGTCTTCCTCAGCCCATTCGGAGCTAAAGAGGAAGAGGCCGGCGAGGTTAGACATTCCTGTGGCATCGGTGAGTTTGGAAAATATGTCGATGCCCTCATCAGCGTCGATGAGGGAGATCGTAGAGGTTGAGAGAAAGGGCTATTCTGTTTACTGCAAAAGAGGCAGGAGAGAGGCTATGGAGGATCGTTATTCCGCCGCGGTTGATCTTCAAGGAGATCCCAAACAGGCTTTCTTCGGCATCTTTGACGGGCATGGAGGTGCAAAAGCTGCTCAATTTGCATCAGAAAACTTGGAAAAGAACATTTTAGACGAACTAGAAAGGAGGGACGATGATGAAATCGAGCAGGCTGTTAAGATCGGTTACCTCAACACTGATTCCGATTTCTTAAAAGAGGATATGCGTGGTGGGTCCTGCTGTGTAACTGCTTTGATCAGAAAAGGCAACCTCGTTGTATCCAATGCCGGTGATTGCCGTGCTGTTATAAGCCAAGGAGGAGTCGCAGAGGCTCTCACATCAGATCACCGTCCTTCCAGACAAGACGAAAGGGATAGAATTGAGACCTCGGGTGGATATGTTGATATGTGCCATGGTGTATTGAGAATTCAAGGATCTTTGGCTGTCTCTAGAGGGATCGGAGATGGGGACCTTAAAAAGTGGGTAATTGCAGAACCAGAGACGAAAATCTTTTCGATTGAATCTCAACATGAGTTCTTAATCTTAGCTTCAGACGGTTTATGGGATAAGGTAACCAATCAAGAAGCTGTAGACATTGTCAGACCATTATGTATCAAAAGCGACAAGATGGAACCATTGTTTGCGTGTAAAAAGCTTGTGGAGCTTGCTACTACAAGAGGGTCTGCAGATGATATCAGTGTCATACTAATCCAGTTGGGAAACTTTATCAGTTGA 1179 46.82 MTCSVAVSSSPSFSPSSSLFCSKSIISPSHEALTLTLGHLKSSKSSSSPCSSAPSSPSSPFRLRRPKPPYVISSFVSSSNSTQAPSPVPLSSSAHSELKRKRPARLDIPVASVSLENMSMPSSASMREIVEVERKGYSVYCKRGRREAMEDRYSAAVDLQGDPKQAFFGIFDGHGGAKAAQFASENLEKNILDELERRDDDEIEQAVKIGYLNTDSDFLKEDMRGGSCCVTALIRKGNLVVSNAGDCRAVISQGGVAEALTSDHRPSRQDERDRIETSGGYVDMCHGVLRIQGSLAVSRGIGDGDLKKWVIAEPETKIFSIESQHEFLILASDGLWDKVTNQEAVDIVRPLCIKSDKMEPLFACKKLVELATTRGSADDISVILIQLGNFIS 392
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 230820 232836 + Conep07aG0005300.1 Cone7ag0053 440649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag0053 392 MobiDBLite consensus disorder prediction 41 103 - -
Cone7ag0053 392 FunFam probable protein phosphatase 2C 25 129 390 - -
Cone7ag0053 392 SUPERFAMILY PP2C-like 126 389 IPR036457 -
Cone7ag0053 392 ProSiteProfiles PPM-type phosphatase domain profile. 136 387 IPR001932 -
Cone7ag0053 392 MobiDBLite consensus disorder prediction 41 59 - -
Cone7ag0053 392 Pfam Protein phosphatase 2C 137 380 IPR001932 -
Cone7ag0053 392 PANTHER PROTEIN PHOSPHATASE 121 385 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cone7ag0053 392 Gene3D - 135 390 IPR036457 -
Cone7ag0053 392 SMART PP2C_SIG_2 147 387 IPR001932 -
Cone7ag0053 392 SMART PP2C_4 124 385 IPR001932 -
Cone7ag0053 392 ProSitePatterns PPM-type phosphatase domain signature. 167 175 IPR000222 GO:0043169(InterPro)
Cone7ag0053 392 MobiDBLite consensus disorder prediction 72 93 - -
Cone7ag0053 392 CDD PP2Cc 136 387 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0679 Cone-Chr12:6226908 Cone7ag0053 Cone-Chr7:230820 1.47E-74 dispersed
Cone1ag1663 Cone-Chr1:57808702 Cone7ag0053 Cone-Chr7:230820 4.85E-119 dispersed
Cone5ag0192 Cone-Chr5:795244 Cone7ag0053 Cone-Chr7:230820 6.75E-124 dispersed
Cone7ag0053 Cone-Chr7:230820 Cone7ag1645 Cone-Chr7:11098796 1.99E-57 dispersed
Cone14ag0667 Cone-Chr14:3439058 Cone7ag0053 Cone-Chr7:230820 1.52E-12 wgd
Cone15ag0704 Cone-Chr15:3824156 Cone7ag0053 Cone-Chr7:230820 2.69E-38 wgd
Cone4ag0057 Cone-Chr4:293560 Cone7ag0053 Cone-Chr7:230820 1.88E-232 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag0053 K17506 - csv:101207841 474.167