Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag0057 ATGGCTTCTTGCGTGACGATGGACACGGCTCGAGCCCTGGCTTGCCGAGACAGCCGCGCCGCCGCACACTTGAAGCTCCTCTCCATCTTCATAATCTTCTTCACCAGCGTCATCGGCATATCCTCGCCGGTCCTCCTCGCCCGATACTTCCAAGGAAAATCCGCTTACGACCGGGCCATCCTAGTCATCAAGTGCTTCGCGGCAGGTGTCATCCTCTCCACCTCTCTCGTCCACGTCCTCCCCGACGCCTTCCAAGCTCTCTCCGACTGCCACGTCGCCTCACTTCACCCCTGGAAAGACTTTCCCTTCGCCGGCCTCGTCACCATGATCGGAGCCCTACTAGCCCTCCTGGTCGACATCACCGCCAGCTCACACGTGGAGCACAGCCATAGTAACTACAAGCCGTTGGATCATATAGCTACAGGACGTGATCATCATCCTGATCACGAGGAGGGTCAGTTGAAAGTAATCAGCGGCGGGGATCACGATCATGAAGTGGATGCAACGGAAGAGTTGGTGAGGATAAAGCAGAGGCTGGTTTCTCAGGTGCTGGAAATAGGGATAATATTTCATTCAGTGATAATAGGAGTGACACTTGGAATGTCTCAGAATCAGTGCACCATAAGGCCTCTCGTCACTGCTTTGGCTTTCCACCAGATTTTTGAAGGCATGGGATTAGGTGGCTGCATTGCTCAGGCAGGATTCAGTTTTGGAACGACGGCGTATATGAACTTCATGTTCTCAGTGACAACACCAATGGGGGTAGTGTTGGGAATGGTATTGTTTTCAGTGACAGGTTATGACGACAATAACCCTAAGGCCTTGATTATGGAGGGTTTATTAGGGTCATTTTCATCGGGTATTCTGATATACATGGGACTAGTCGACCTCATAGCCGTTGATTTCTTTCATAATAAGCTTATGGGTTCTACTACATGGTTGAAGAAGGCCTCCTTCATTGCATTAGCTCTAGGTTCTACTTCAATGTCAATACTAGCAATATGGGCATGA 1011 50.45 MASCVTMDTARALACRDSRAAAHLKLLSIFIIFFTSVIGISSPVLLARYFQGKSAYDRAILVIKCFAAGVILSTSLVHVLPDAFQALSDCHVASLHPWKDFPFAGLVTMIGALLALLVDITASSHVEHSHSNYKPLDHIATGRDHHPDHEEGQLKVISGGDHDHEVDATEELVRIKQRLVSQVLEIGIIFHSVIIGVTLGMSQNQCTIRPLVTALAFHQIFEGMGLGGCIAQAGFSFGTTAYMNFMFSVTTPMGVVLGMVLFSVTGYDDNNPKALIMEGLLGSFSSGILIYMGLVDLIAVDFFHNKLMGSTTWLKKASFIALALGSTSMSILAIWA 336
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 249044 251023 - Conep07aG0005700.1 Cone7ag0057 440653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag0057 336 PANTHER ZINC/IRON TRANSPORTER 21 335 - GO:0005385(PANTHER)|GO:0005886(PANTHER)|GO:0016020(PANTHER)|GO:0071577(PANTHER)
Cone7ag0057 336 Pfam ZIP Zinc transporter 23 333 IPR003689 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)|GO:0055085(InterPro)
Cone7ag0057 336 NCBIfam ZIP zinc/iron transport family 13 336 IPR004698 GO:0005385(InterPro)|GO:0016020(InterPro)|GO:0071577(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone7ag0057 Cone-Chr7:249044 Cone9ag0269 Cone-Chr9:1146817 2.86E-70 dispersed
Cone17ag0926 Cone-Chr17:7271060 Cone7ag0057 Cone-Chr7:249044 3.53E-58 wgd
Cone20ag0270 Cone-Chr20:1203835 Cone7ag0057 Cone-Chr7:249044 7.10E-62 wgd
Cone4ag0061 Cone-Chr4:309888 Cone7ag0057 Cone-Chr7:249044 2.34E-220 wgd
Cone4ag1663 Cone-Chr4:12488667 Cone7ag0057 Cone-Chr7:249044 1.65E-53 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag0057 K14709 - cit:102630191 496.893