Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag0061 ATGTCGAACCGCGGGGAAGGTGAGGTTGTTTGCGTTACCGGTGCAAGCGGCTGTATCGGATCATACCTCGTCCACCTCCTTCTCCTCCGCGGATATTCTGTTCACGCCACCGTTCAAAATCTCAGGGATGAAACCGAGACGAAGCATCTGGAAGCTCTGGAAGGAGCAGATGCGCGTCTTCGTCTCTTCCAGATTGATCTCCTTGACTACAACTCCATCTTCGCCGCCGTCAATGGCTGTTCTGGCGTCTTCCACCTTGCCTCTCCCTGTATCGTTGATCGTGTTCAAGATCCTGAGAAGGAGCTGTTGGACCCAGCTATCAAAGGAACCGTTAATGTCCTGACAGCGGCAAAGGAAGGCGGGGCCCGGCGTGTGGTGGTGACGTCATCTATCTCCGCCATTACTCCTAGCCCTCGCTGGCCGTCCGATGTTGTCAAGAGAGAAGATTGCTGGACCGACGTTGATTACTGCAAGCAAAATGAATTATGGTATCCGCTTTCAAAAACCGAAGCCGAAAAAGCTGCTTGGGAGTTTGCCGAGAAGAATGGTTTGGATGTGGTCATGGTAAATCCAGGCACCGTGATAGGTCCGATTATTCCTCCAAGGCTCAATGCCAGCATGTTGATGTTTTTACGCCTTCTCCAGGGGAGCAGCGAAACATATGAGAACTTTTATATGGGACCGGTACACTTCAAAGATGTAGCCCTAGCACATATCTTGGTGTATGAAAACAAATCAGCAAGTGGAAGACATTTGTGCGTTGAAGCTATATCTCATTTTGGTGACCTGGCGGCAAAGGTTGCCGAACTTTATCCTGAATTCAAGGTGGCCAGTTTCCCCAAGGATACGCAACCGGGATTGCTGCGATCGAAAGATGGAGCAAAGAAACTGATGGACCTAGGTTTACAGTTCATTCCGATGGAGAAAATCATTAAGGATGCTGTTGAGAGCTTAAGAAGCAAGGGATTCATTTCTTGA 978 49.39 MSNRGEGEVVCVTGASGCIGSYLVHLLLLRGYSVHATVQNLRDETETKHLEALEGADARLRLFQIDLLDYNSIFAAVNGCSGVFHLASPCIVDRVQDPEKELLDPAIKGTVNVLTAAKEGGARRVVVTSSISAITPSPRWPSDVVKREDCWTDVDYCKQNELWYPLSKTEAEKAAWEFAEKNGLDVVMVNPGTVIGPIIPPRLNASMLMFLRLLQGSSETYENFYMGPVHFKDVALAHILVYENKSASGRHLCVEAISHFGDLAAKVAELYPEFKVASFPKDTQPGLLRSKDGAKKLMDLGLQFIPMEKIIKDAVESLRSKGFIS 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 266764 270799 - Conep07aG0006100.1 Cone7ag0061 440657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag0061 325 CDD FR_SDR_e 10 302 - -
Cone7ag0061 325 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 319 IPR036291 -
Cone7ag0061 325 FunFam Cinnamoyl-CoA reductase 1 3 325 - -
Cone7ag0061 325 Gene3D - 2 325 - -
Cone7ag0061 325 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 9 317 IPR050425 GO:0016616(PANTHER)
Cone7ag0061 325 Pfam NAD dependent epimerase/dehydratase family 10 247 IPR001509 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone2ag0746 Cone-Chr2:33247355 Cone7ag0061 Cone-Chr7:266764 1.55E-193 dispersed
Cone5ag0620 Cone-Chr5:2655577 Cone7ag0061 Cone-Chr7:266764 6.08E-41 dispersed
Cone5ag1760 Cone-Chr5:12536825 Cone7ag0061 Cone-Chr7:266764 7.98E-48 dispersed
Cone10ag0849 Cone-Chr10:4334353 Cone7ag0061 Cone-Chr7:266764 7.26E-114 transposed
Cone8ag0598 Cone-Chr8:5161898 Cone7ag0061 Cone-Chr7:266764 2.61E-07 transposed
Cone4ag0067 Cone-Chr4:346442 Cone7ag0061 Cone-Chr7:266764 8.98E-160 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag0061 - - - 0.0