Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag0062 ATGGGTCTGGCTTCTGAGATTCAGTTCCATGTTCTTGCAGTTGACGACAGCCTTGTTGACAGGAAGTTGATTGAGAGGCTCCTCAAGACATCTTCTTATCATGTTACTACAGTTGATTCTGGTAGTAAGGCTTTAGATTTTCTGGGTTTCCATGAAGATCATGAGAGAGCTGTCAACATCTCCTCTGTTTCTCCTAACGATCAAGATGTTGAAGTAAACTTAATTATTACCGATTACTGTATGCCGGAGATGTCGGGTTTCGATCTCCTCCGGAAGATCAAAGAATCCAAGTCCCTAAGAGATATTCCAGTTGTGATCATGTCCTCAGAAAACGTTCCATCCAGGATAAGCAGATGCTTGGAAGAGGGAGCAGAGGATTTTTTCTTGAAGCCTGTTCAGATAGGTGACGTCGGCAAGCTTAGGTCCCATTGTTCTGAAAGAAGAAGCCGGATTCAAATAGAACCCCTCAGCAACGAGACCGCCGCCATGAAAAGAAGAGGAGCAGCCTCCTTTGATCAGAGAACTAGAACACAAGTTTCCTCGTTGATGGCTTAG 555 44.5 MGLASEIQFHVLAVDDSLVDRKLIERLLKTSSYHVTTVDSGSKALDFLGFHEDHERAVNISSVSPNDQDVEVNLIITDYCMPEMSGFDLLRKIKESKSLRDIPVVIMSSENVPSRISRCLEEGAEDFFLKPVQIGDVGKLRSHCSERRSRIQIEPLSNETAAMKRRGAASFDQRTRTQVSSLMA 184
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 273575 274603 + Conep07aG0006200.1 Cone7ag0062 440658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag0062 184 Gene3D - 10 183 - -
Cone7ag0062 184 ProSiteProfiles Response regulatory domain profile. 10 145 IPR001789 GO:0000160(InterPro)
Cone7ag0062 184 PANTHER TWO-COMPONENT RESPONSE REGULATOR 8 150 IPR045279 GO:0009736(InterPro)
Cone7ag0062 184 SMART REC_2 9 141 IPR001789 GO:0000160(InterPro)
Cone7ag0062 184 SUPERFAMILY CheY-like 9 148 IPR011006 -
Cone7ag0062 184 CDD REC_typeA_ARR 11 140 - -
Cone7ag0062 184 MobiDBLite consensus disorder prediction 162 184 - -
Cone7ag0062 184 Pfam Response regulator receiver domain 11 136 IPR001789 GO:0000160(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0617 Cone-Chr13:6253790 Cone7ag0062 Cone-Chr7:273575 3.24E-72 dispersed
Cone19ag0548 Cone-Chr19:4566224 Cone7ag0062 Cone-Chr7:273575 2.53E-69 dispersed
Cone20ag0441 Cone-Chr20:2226763 Cone7ag0062 Cone-Chr7:273575 1.58E-50 dispersed
Cone3ag0023 Cone-Chr3:145504 Cone7ag0062 Cone-Chr7:273575 3.21E-56 dispersed
Cone7ag0062 Cone-Chr7:273575 Cone8ag0639 Cone-Chr8:6286505 5.41E-49 dispersed
Cone4ag0068 Cone-Chr4:349029 Cone7ag0062 Cone-Chr7:273575 3.31E-86 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
46434 PF00481 PP2C 1.00E-08 CL0238 Cone TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag0062 K14492 - vvi:100243627 217.624