Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone7ag0070 | ATGGCTTCCTCTCCTGGGAGCTTAGATACATCTGCAAATTCACGTCAAAACTTCACCTTCCCCACACACCCTTTCATGACTACATCATACTCCGAACTCTTAGTCTCCGGTAGCGGCGGAGACGACTTTACCAGCTGCCGTGGTCTCTCAGAACGAATAGCAGAACGAACCGGCTCAGGTGTGCCGAAATTCAAATCGATCCCACCTCCTTCCCTGCCGCTATCTCCACCACCTGTCTCTCCCTCCTCTTACTTCGCTATTCCGGCTGGGATCAGCCCAGCCGAGCTCCTCGACTCCCCTGTTCTTCTCAGCTCCTCTTACATTCTCCCATCTCCAACTACTGGATCGTTTCCAACTCAGGCTTTCAACTGGAAAAGCGGTTCTGCATATAATTATAATAACAACAACCAGGAGCAGAATAATGTCAAACTGGAAGAAGCTGATCATAAGACCTTCTCTGATTTCTCCTTCCAAACCCAGCAAAGGGCTTCCAACTCTTCAACTCAGGGGTGGAGTATTCAAGAACCAAGAAGCAATCAAGAAAATAAGGCAAAGCCGGAATTTGCGCCGGCTCAGAGCCAGAGCTTCTCGCCTGAGATTTCCACCTTACAGACTCAGAGTCAGAGCAACAACGATGGCGCTGCTGTTGCTACTCACGACTACGCCAATCACCATAGTCAGAATCATTCAGTGTGCAATACGAGGTCGGATGATGGGTATAACTGGAGAAAATACGGACAAAAGCAAGTGAAAGGGAGTGAAAATCCGAGAAGTTATTACAAGTGCACTTTCCCGAATTGTCCTACTAAGAAGAAAGTGGAAAGGTCATTAGATGGTCAGATCACTGAAATCGTTTACAAGGGCAGCCATAGCCACCCTAAGCCACAGAAAACGAGGCGATCCTCGTCGGCTTCTTCCTCTCTTGCATTGATTCAACAGGCTTCTAATCATTCCATCAGTGAATTCCCTGATCACTCATCTAGTACTATTACTAATGGGCAGATGGATTCCGCCACGGCTACGCCTGAGAATTCTTCTATCTCGGTTGGAGACGATGATTTTGACCGGAATTCTCAGAGAAGTAAGTCAGCAGGAGGTGATGAGTTTGATGAGGATGACGAACCCGGTGCGAAAAGATGGTCAGGGAAAATGGTGGGGGATATTGGTAATAACAATGAAGGCATGTCAGCAGCAGCTGGAAGCAGACCAGTAAGAGAGCCTAGAGTTGTTGTTCAAACAACTAGTGAAATTGATATTCTTGATGATGGTTATAGGTGGAGAAAATATGGGCAGAAAGTTGTAAAGGGAAATCCAAATCCAAGGAGCTACTATAAGTGTACAAGTCCTGGATGTTCAGTGAGAAAGCATGTGGAGAGAGCATCTCATGATCTAAGGGCAGTTATTACAACCTATGAGGGAAAGCACAACCATGATGTTCCTGCCGCCCGCGGGAGCACGGGCCATTCTCTTAACCAGCCTTTACCCACCACTACAATCAATACCAATATCAATGTCAATCCCGGCCCGCCGGCGATTCGTCCAGTGGTCCATCACCAGATGACGAACAACAGTAATCTTCTTCATCCATCGTTTTCTATGGAAATGTTACAGGGCCCTGCTGGAGGTAGATTCGGATTATCGACAGAATATGGAAACTCTATCAACGGCTCTACTTCTTACATGAACCAAACACAAACACAAACGCAGCTCACGGATTATACTAATAATAGGAATGTCTTCTCCTCAAGAGCTAAGGAGGAACCAAGAGATGACATGTTCTTGGAATCCTTGCTCTACTAA | 1800 | 46.56 | MASSPGSLDTSANSRQNFTFPTHPFMTTSYSELLVSGSGGDDFTSCRGLSERIAERTGSGVPKFKSIPPPSLPLSPPPVSPSSYFAIPAGISPAELLDSPVLLSSSYILPSPTTGSFPTQAFNWKSGSAYNYNNNNQEQNNVKLEEADHKTFSDFSFQTQQRASNSSTQGWSIQEPRSNQENKAKPEFAPAQSQSFSPEISTLQTQSQSNNDGAAVATHDYANHHSQNHSVCNTRSDDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVERSLDGQITEIVYKGSHSHPKPQKTRRSSSASSSLALIQQASNHSISEFPDHSSSTITNGQMDSATATPENSSISVGDDDFDRNSQRSKSAGGDEFDEDDEPGAKRWSGKMVGDIGNNNEGMSAAAGSRPVREPRVVVQTTSEIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTSPGCSVRKHVERASHDLRAVITTYEGKHNHDVPAARGSTGHSLNQPLPTTTINTNINVNPGPPAIRPVVHHQMTNNSNLLHPSFSMEMLQGPAGGRFGLSTEYGNSINGSTSYMNQTQTQTQLTDYTNNRNVFSSRAKEEPRDDMFLESLLY | 599 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 297307 | 299642 | - | Conep07aG0007000.1 | Cone7ag0070 | 440666 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone7ag0070 | 599 | SUPERFAMILY | WRKY DNA-binding domain | 234 | 295 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone7ag0070 | 599 | SUPERFAMILY | WRKY DNA-binding domain | 412 | 480 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone7ag0070 | 599 | SMART | WRKY_cls | 236 | 294 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone7ag0070 | 599 | SMART | WRKY_cls | 420 | 479 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone7ag0070 | 599 | MobiDBLite | consensus disorder prediction | 157 | 213 | - | - | |
Cone7ag0070 | 599 | MobiDBLite | consensus disorder prediction | 285 | 407 | - | - | |
Cone7ag0070 | 599 | MobiDBLite | consensus disorder prediction | 349 | 380 | - | - | |
Cone7ag0070 | 599 | FunFam | WRKY transcription factor | 224 | 296 | - | - | |
Cone7ag0070 | 599 | FunFam | WRKY transcription factor 33 | 407 | 473 | - | - | |
Cone7ag0070 | 599 | ProSiteProfiles | WRKY domain profile. | 237 | 295 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone7ag0070 | 599 | ProSiteProfiles | WRKY domain profile. | 415 | 480 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone7ag0070 | 599 | Gene3D | WRKY domain | 407 | 473 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone7ag0070 | 599 | Gene3D | WRKY domain | 205 | 296 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone7ag0070 | 599 | MobiDBLite | consensus disorder prediction | 54 | 78 | - | - | |
Cone7ag0070 | 599 | MobiDBLite | consensus disorder prediction | 298 | 348 | - | - | |
Cone7ag0070 | 599 | Pfam | WRKY DNA -binding domain | 237 | 293 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone7ag0070 | 599 | Pfam | WRKY DNA -binding domain | 421 | 478 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone7ag0070 | 599 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 143 | 488 | IPR044810 | GO:0003700(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone3ag0297 | Cone-Chr3:1535791 | Cone7ag0070 | Cone-Chr7:297307 | 6.66E-75 | dispersed | |
Cone3ag0629 | Cone-Chr3:3107909 | Cone7ag0070 | Cone-Chr7:297307 | 6.20E-75 | dispersed | |
Cone5ag0939 | Cone-Chr5:4013009 | Cone7ag0070 | Cone-Chr7:297307 | 4.34E-79 | dispersed | |
Cone6ag0027 | Cone-Chr6:172101 | Cone7ag0070 | Cone-Chr7:297307 | 1.55E-84 | dispersed | |
Cone6ag0556 | Cone-Chr6:2738542 | Cone7ag0070 | Cone-Chr7:297307 | 5.98E-28 | dispersed | |
Cone6ag1318 | Cone-Chr6:10613619 | Cone7ag0070 | Cone-Chr7:297307 | 8.49E-28 | dispersed | |
Cone7ag0070 | Cone-Chr7:297307 | Cone9ag0026 | Cone-Chr9:128238 | 3.53E-80 | dispersed | |
Cone15ag0722 | Cone-Chr15:4027841 | Cone7ag0070 | Cone-Chr7:297307 | 3.32E-28 | wgd | |
Cone4ag0075 | Cone-Chr4:366501 | Cone7ag0070 | Cone-Chr7:297307 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
46436 | PF00481 | PP2C | 2.50E-28 | CL0238 | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone7ag0070 | K13424 | - | vvi:100243352 | 627.476 |