Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag0070 ATGGCTTCCTCTCCTGGGAGCTTAGATACATCTGCAAATTCACGTCAAAACTTCACCTTCCCCACACACCCTTTCATGACTACATCATACTCCGAACTCTTAGTCTCCGGTAGCGGCGGAGACGACTTTACCAGCTGCCGTGGTCTCTCAGAACGAATAGCAGAACGAACCGGCTCAGGTGTGCCGAAATTCAAATCGATCCCACCTCCTTCCCTGCCGCTATCTCCACCACCTGTCTCTCCCTCCTCTTACTTCGCTATTCCGGCTGGGATCAGCCCAGCCGAGCTCCTCGACTCCCCTGTTCTTCTCAGCTCCTCTTACATTCTCCCATCTCCAACTACTGGATCGTTTCCAACTCAGGCTTTCAACTGGAAAAGCGGTTCTGCATATAATTATAATAACAACAACCAGGAGCAGAATAATGTCAAACTGGAAGAAGCTGATCATAAGACCTTCTCTGATTTCTCCTTCCAAACCCAGCAAAGGGCTTCCAACTCTTCAACTCAGGGGTGGAGTATTCAAGAACCAAGAAGCAATCAAGAAAATAAGGCAAAGCCGGAATTTGCGCCGGCTCAGAGCCAGAGCTTCTCGCCTGAGATTTCCACCTTACAGACTCAGAGTCAGAGCAACAACGATGGCGCTGCTGTTGCTACTCACGACTACGCCAATCACCATAGTCAGAATCATTCAGTGTGCAATACGAGGTCGGATGATGGGTATAACTGGAGAAAATACGGACAAAAGCAAGTGAAAGGGAGTGAAAATCCGAGAAGTTATTACAAGTGCACTTTCCCGAATTGTCCTACTAAGAAGAAAGTGGAAAGGTCATTAGATGGTCAGATCACTGAAATCGTTTACAAGGGCAGCCATAGCCACCCTAAGCCACAGAAAACGAGGCGATCCTCGTCGGCTTCTTCCTCTCTTGCATTGATTCAACAGGCTTCTAATCATTCCATCAGTGAATTCCCTGATCACTCATCTAGTACTATTACTAATGGGCAGATGGATTCCGCCACGGCTACGCCTGAGAATTCTTCTATCTCGGTTGGAGACGATGATTTTGACCGGAATTCTCAGAGAAGTAAGTCAGCAGGAGGTGATGAGTTTGATGAGGATGACGAACCCGGTGCGAAAAGATGGTCAGGGAAAATGGTGGGGGATATTGGTAATAACAATGAAGGCATGTCAGCAGCAGCTGGAAGCAGACCAGTAAGAGAGCCTAGAGTTGTTGTTCAAACAACTAGTGAAATTGATATTCTTGATGATGGTTATAGGTGGAGAAAATATGGGCAGAAAGTTGTAAAGGGAAATCCAAATCCAAGGAGCTACTATAAGTGTACAAGTCCTGGATGTTCAGTGAGAAAGCATGTGGAGAGAGCATCTCATGATCTAAGGGCAGTTATTACAACCTATGAGGGAAAGCACAACCATGATGTTCCTGCCGCCCGCGGGAGCACGGGCCATTCTCTTAACCAGCCTTTACCCACCACTACAATCAATACCAATATCAATGTCAATCCCGGCCCGCCGGCGATTCGTCCAGTGGTCCATCACCAGATGACGAACAACAGTAATCTTCTTCATCCATCGTTTTCTATGGAAATGTTACAGGGCCCTGCTGGAGGTAGATTCGGATTATCGACAGAATATGGAAACTCTATCAACGGCTCTACTTCTTACATGAACCAAACACAAACACAAACGCAGCTCACGGATTATACTAATAATAGGAATGTCTTCTCCTCAAGAGCTAAGGAGGAACCAAGAGATGACATGTTCTTGGAATCCTTGCTCTACTAA 1800 46.56 MASSPGSLDTSANSRQNFTFPTHPFMTTSYSELLVSGSGGDDFTSCRGLSERIAERTGSGVPKFKSIPPPSLPLSPPPVSPSSYFAIPAGISPAELLDSPVLLSSSYILPSPTTGSFPTQAFNWKSGSAYNYNNNNQEQNNVKLEEADHKTFSDFSFQTQQRASNSSTQGWSIQEPRSNQENKAKPEFAPAQSQSFSPEISTLQTQSQSNNDGAAVATHDYANHHSQNHSVCNTRSDDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVERSLDGQITEIVYKGSHSHPKPQKTRRSSSASSSLALIQQASNHSISEFPDHSSSTITNGQMDSATATPENSSISVGDDDFDRNSQRSKSAGGDEFDEDDEPGAKRWSGKMVGDIGNNNEGMSAAAGSRPVREPRVVVQTTSEIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTSPGCSVRKHVERASHDLRAVITTYEGKHNHDVPAARGSTGHSLNQPLPTTTINTNINVNPGPPAIRPVVHHQMTNNSNLLHPSFSMEMLQGPAGGRFGLSTEYGNSINGSTSYMNQTQTQTQLTDYTNNRNVFSSRAKEEPRDDMFLESLLY 599
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 297307 299642 - Conep07aG0007000.1 Cone7ag0070 440666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag0070 599 SUPERFAMILY WRKY DNA-binding domain 234 295 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cone7ag0070 599 SUPERFAMILY WRKY DNA-binding domain 412 480 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cone7ag0070 599 SMART WRKY_cls 236 294 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cone7ag0070 599 SMART WRKY_cls 420 479 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cone7ag0070 599 MobiDBLite consensus disorder prediction 157 213 - -
Cone7ag0070 599 MobiDBLite consensus disorder prediction 285 407 - -
Cone7ag0070 599 MobiDBLite consensus disorder prediction 349 380 - -
Cone7ag0070 599 FunFam WRKY transcription factor 224 296 - -
Cone7ag0070 599 FunFam WRKY transcription factor 33 407 473 - -
Cone7ag0070 599 ProSiteProfiles WRKY domain profile. 237 295 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cone7ag0070 599 ProSiteProfiles WRKY domain profile. 415 480 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cone7ag0070 599 Gene3D WRKY domain 407 473 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cone7ag0070 599 Gene3D WRKY domain 205 296 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cone7ag0070 599 MobiDBLite consensus disorder prediction 54 78 - -
Cone7ag0070 599 MobiDBLite consensus disorder prediction 298 348 - -
Cone7ag0070 599 Pfam WRKY DNA -binding domain 237 293 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cone7ag0070 599 Pfam WRKY DNA -binding domain 421 478 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cone7ag0070 599 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 143 488 IPR044810 GO:0003700(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone3ag0297 Cone-Chr3:1535791 Cone7ag0070 Cone-Chr7:297307 6.66E-75 dispersed
Cone3ag0629 Cone-Chr3:3107909 Cone7ag0070 Cone-Chr7:297307 6.20E-75 dispersed
Cone5ag0939 Cone-Chr5:4013009 Cone7ag0070 Cone-Chr7:297307 4.34E-79 dispersed
Cone6ag0027 Cone-Chr6:172101 Cone7ag0070 Cone-Chr7:297307 1.55E-84 dispersed
Cone6ag0556 Cone-Chr6:2738542 Cone7ag0070 Cone-Chr7:297307 5.98E-28 dispersed
Cone6ag1318 Cone-Chr6:10613619 Cone7ag0070 Cone-Chr7:297307 8.49E-28 dispersed
Cone7ag0070 Cone-Chr7:297307 Cone9ag0026 Cone-Chr9:128238 3.53E-80 dispersed
Cone15ag0722 Cone-Chr15:4027841 Cone7ag0070 Cone-Chr7:297307 3.32E-28 wgd
Cone4ag0075 Cone-Chr4:366501 Cone7ag0070 Cone-Chr7:297307 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
46436 PF00481 PP2C 2.50E-28 CL0238 Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag0070 K13424 - vvi:100243352 627.476