Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag0077 ATGGAGCATAGTTCCAATCATGTCTTGATGAAAAGCTATGAACTGGGTAGATTACTAGGGCAGGGAACTTTCGCAAAGGTTTACTATGCAAGAAGTATTAGAACTAATCGAAGTGTAGCAATCAAGGTAATAGACAAAGACAAGATTTTGAAGGCCGACCTTTTCGATCAGACCAAGCGAGAAATATCGATCATGAGAGTAATCCGACACCCTAATGTCTTACAACTTTACGAGGTCATGGCCACAAAAACCAAGATTTACTTTGTCATGGAATACGCAAAAGGTGGCGAGCTTTTCGATCGAGTTTCTAAAGGCAGGCTCAAAGAGGACGTTGCGCTTAAGTATTTTATACAGTTGATCATTGCAGTTGATTTCTGTCACAGTAGAGGTGTATATCACCGGGATATAAAACCCGAGAACTTACTGCTAGATGAGAATGAGAATCTTAAGGTGTCTGATTTCGGGTTAAGCACGCTAGCCGAGTTCAAGCACCAAGATGGGCTGTTTCATACCATATGTGGCACTCCGGCCTATGTCGCACCTGAGGTCATCAACCAGAAGGGCTATGATGGGGCGAAAGCTGATATTTGGTCTTGTGGAGTGGTTCTGTTTGTGCTTTTGGCGGGTTATCTTCCCTTTCAAGATTCGAATCTCATGGAGATGTATAGGAAGATCGGTAGAGCAGAGTATAGATGTCCTAGCTGGTTTCCAATTGAAGTGCGCAGGCTGTTGAGCAAGATGTTGGATCCAAACCCGAATACTAGGATTTGTATGGAGAAGATTAAGGGAAGTCGTTGGTTTCAAAAAGGGTTGTCCTCTAAACAGGTTGAAGCTGAAACGAGAGTAGATACAAACATGGTTGTTGAGGAAAAACAAGAAGAGATGGGGAGGCCTCCAAATTTGAATGCTTTTGACATCATCTCACTTTCTGATGGATTTGATCTGTCTAACTTGTTTGAAGACGGTTCTCAGAAGAGAGAAGCGAGATTTACAAGTTGTAAACCTGCCTCTGTCATTATCTCTAAGATAGAAGAAATTGGGAGGAAGTTGAGAATGAGAGTGCGGAAGAAGGAGGCCGGTTTGCTGAGATTGGACGGACAAAAGGAAGGTCGGAAAGGAGTGATTTCCATCGAAGCAGAGATCTTCGAGATTACTCCGAATTTACATTTGGTGGAGGTGAAAAAGTCGAGTGGAGATACATTAGAATATCAGAAAGTACTGAAAGACGATATTCGTTCGGGTCTTCAAGATATTGTTTGGGTTTGGCAAGGAGAGCAAAAACACGGGGAACCGTCTTCCGTTCCCAGATAG 1311 42.94 MEHSSNHVLMKSYELGRLLGQGTFAKVYYARSIRTNRSVAIKVIDKDKILKADLFDQTKREISIMRVIRHPNVLQLYEVMATKTKIYFVMEYAKGGELFDRVSKGRLKEDVALKYFIQLIIAVDFCHSRGVYHRDIKPENLLLDENENLKVSDFGLSTLAEFKHQDGLFHTICGTPAYVAPEVINQKGYDGAKADIWSCGVVLFVLLAGYLPFQDSNLMEMYRKIGRAEYRCPSWFPIEVRRLLSKMLDPNPNTRICMEKIKGSRWFQKGLSSKQVEAETRVDTNMVVEEKQEEMGRPPNLNAFDIISLSDGFDLSNLFEDGSQKREARFTSCKPASVIISKIEEIGRKLRMRVRKKEAGLLRLDGQKEGRKGVISIEAEIFEITPNLHLVEVKKSSGDTLEYQKVLKDDIRSGLQDIVWVWQGEQKHGEPSSVPR 436
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 332438 333801 + Conep07aG0007700.1 Cone7ag0077 440673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag0077 436 ProSiteProfiles NAF domain profile. 296 320 IPR018451 GO:0007165(InterPro)
Cone7ag0077 436 CDD CIPK_C 302 416 - -
Cone7ag0077 436 Pfam Protein kinase domain 13 267 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag0077 436 Gene3D Kinase associated domain 1, KA1 304 421 - -
Cone7ag0077 436 FunFam Non-specific serine/threonine protein kinase 297 420 - -
Cone7ag0077 436 FunFam Non-specific serine/threonine protein kinase 6 301 - -
Cone7ag0077 436 ProSiteProfiles Protein kinase domain profile. 13 267 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag0077 436 ProSitePatterns Serine/Threonine protein kinases active-site signature. 131 143 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone7ag0077 436 FunFam Non-specific serine/threonine protein kinase 4 92 - -
Cone7ag0077 436 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524(InterPro)
Cone7ag0077 436 Pfam NAF domain 298 356 IPR004041 GO:0007165(InterPro)
Cone7ag0077 436 Gene3D Transferase(Phosphotransferase) domain 1 4 303 - -
Cone7ag0077 436 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 2 407 - GO:0004674(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)
Cone7ag0077 436 SUPERFAMILY Protein kinase-like (PK-like) 9 274 IPR011009 -
Cone7ag0077 436 SMART serkin_6 13 267 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag0285 Cone-Chr4:1311433 Cone7ag0077 Cone-Chr7:332438 5.29E-111 dispersed
Cone5ag1047 Cone-Chr5:4584453 Cone7ag0077 Cone-Chr7:332438 1.30E-218 dispersed
Cone5ag1652 Cone-Chr5:11710174 Cone7ag0077 Cone-Chr7:332438 6.54E-169 dispersed
Cone5ag1653 Cone-Chr5:11714681 Cone7ag0077 Cone-Chr7:332438 3.58E-181 dispersed
Cone6ag0951 Cone-Chr6:4980591 Cone7ag0077 Cone-Chr7:332438 6.52E-170 dispersed
Cone7ag0077 Cone-Chr7:332438 Cone9ag0959 Cone-Chr9:4798124 7.27E-167 dispersed
Cone14ag0676 Cone-Chr14:3489720 Cone7ag0077 Cone-Chr7:332438 4.41E-113 wgd
Cone4ag0084 Cone-Chr4:406201 Cone7ag0077 Cone-Chr7:332438 5.90E-280 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82990 PF04852 DUF640 7.60E-65 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag0077 - - - 0.0