Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone7ag0077 | ATGGAGCATAGTTCCAATCATGTCTTGATGAAAAGCTATGAACTGGGTAGATTACTAGGGCAGGGAACTTTCGCAAAGGTTTACTATGCAAGAAGTATTAGAACTAATCGAAGTGTAGCAATCAAGGTAATAGACAAAGACAAGATTTTGAAGGCCGACCTTTTCGATCAGACCAAGCGAGAAATATCGATCATGAGAGTAATCCGACACCCTAATGTCTTACAACTTTACGAGGTCATGGCCACAAAAACCAAGATTTACTTTGTCATGGAATACGCAAAAGGTGGCGAGCTTTTCGATCGAGTTTCTAAAGGCAGGCTCAAAGAGGACGTTGCGCTTAAGTATTTTATACAGTTGATCATTGCAGTTGATTTCTGTCACAGTAGAGGTGTATATCACCGGGATATAAAACCCGAGAACTTACTGCTAGATGAGAATGAGAATCTTAAGGTGTCTGATTTCGGGTTAAGCACGCTAGCCGAGTTCAAGCACCAAGATGGGCTGTTTCATACCATATGTGGCACTCCGGCCTATGTCGCACCTGAGGTCATCAACCAGAAGGGCTATGATGGGGCGAAAGCTGATATTTGGTCTTGTGGAGTGGTTCTGTTTGTGCTTTTGGCGGGTTATCTTCCCTTTCAAGATTCGAATCTCATGGAGATGTATAGGAAGATCGGTAGAGCAGAGTATAGATGTCCTAGCTGGTTTCCAATTGAAGTGCGCAGGCTGTTGAGCAAGATGTTGGATCCAAACCCGAATACTAGGATTTGTATGGAGAAGATTAAGGGAAGTCGTTGGTTTCAAAAAGGGTTGTCCTCTAAACAGGTTGAAGCTGAAACGAGAGTAGATACAAACATGGTTGTTGAGGAAAAACAAGAAGAGATGGGGAGGCCTCCAAATTTGAATGCTTTTGACATCATCTCACTTTCTGATGGATTTGATCTGTCTAACTTGTTTGAAGACGGTTCTCAGAAGAGAGAAGCGAGATTTACAAGTTGTAAACCTGCCTCTGTCATTATCTCTAAGATAGAAGAAATTGGGAGGAAGTTGAGAATGAGAGTGCGGAAGAAGGAGGCCGGTTTGCTGAGATTGGACGGACAAAAGGAAGGTCGGAAAGGAGTGATTTCCATCGAAGCAGAGATCTTCGAGATTACTCCGAATTTACATTTGGTGGAGGTGAAAAAGTCGAGTGGAGATACATTAGAATATCAGAAAGTACTGAAAGACGATATTCGTTCGGGTCTTCAAGATATTGTTTGGGTTTGGCAAGGAGAGCAAAAACACGGGGAACCGTCTTCCGTTCCCAGATAG | 1311 | 42.94 | MEHSSNHVLMKSYELGRLLGQGTFAKVYYARSIRTNRSVAIKVIDKDKILKADLFDQTKREISIMRVIRHPNVLQLYEVMATKTKIYFVMEYAKGGELFDRVSKGRLKEDVALKYFIQLIIAVDFCHSRGVYHRDIKPENLLLDENENLKVSDFGLSTLAEFKHQDGLFHTICGTPAYVAPEVINQKGYDGAKADIWSCGVVLFVLLAGYLPFQDSNLMEMYRKIGRAEYRCPSWFPIEVRRLLSKMLDPNPNTRICMEKIKGSRWFQKGLSSKQVEAETRVDTNMVVEEKQEEMGRPPNLNAFDIISLSDGFDLSNLFEDGSQKREARFTSCKPASVIISKIEEIGRKLRMRVRKKEAGLLRLDGQKEGRKGVISIEAEIFEITPNLHLVEVKKSSGDTLEYQKVLKDDIRSGLQDIVWVWQGEQKHGEPSSVPR | 436 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 332438 | 333801 | + | Conep07aG0007700.1 | Cone7ag0077 | 440673 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone7ag0077 | 436 | ProSiteProfiles | NAF domain profile. | 296 | 320 | IPR018451 | GO:0007165(InterPro) | |
Cone7ag0077 | 436 | CDD | CIPK_C | 302 | 416 | - | - | |
Cone7ag0077 | 436 | Pfam | Protein kinase domain | 13 | 267 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone7ag0077 | 436 | Gene3D | Kinase associated domain 1, KA1 | 304 | 421 | - | - | |
Cone7ag0077 | 436 | FunFam | Non-specific serine/threonine protein kinase | 297 | 420 | - | - | |
Cone7ag0077 | 436 | FunFam | Non-specific serine/threonine protein kinase | 6 | 301 | - | - | |
Cone7ag0077 | 436 | ProSiteProfiles | Protein kinase domain profile. | 13 | 267 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone7ag0077 | 436 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 131 | 143 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone7ag0077 | 436 | FunFam | Non-specific serine/threonine protein kinase | 4 | 92 | - | - | |
Cone7ag0077 | 436 | ProSitePatterns | Protein kinases ATP-binding region signature. | 19 | 42 | IPR017441 | GO:0005524(InterPro) | |
Cone7ag0077 | 436 | Pfam | NAF domain | 298 | 356 | IPR004041 | GO:0007165(InterPro) | |
Cone7ag0077 | 436 | Gene3D | Transferase(Phosphotransferase) domain 1 | 4 | 303 | - | - | |
Cone7ag0077 | 436 | PANTHER | CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED | 2 | 407 | - | GO:0004674(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER) | |
Cone7ag0077 | 436 | SUPERFAMILY | Protein kinase-like (PK-like) | 9 | 274 | IPR011009 | - | |
Cone7ag0077 | 436 | SMART | serkin_6 | 13 | 267 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone4ag0285 | Cone-Chr4:1311433 | Cone7ag0077 | Cone-Chr7:332438 | 5.29E-111 | dispersed | |
Cone5ag1047 | Cone-Chr5:4584453 | Cone7ag0077 | Cone-Chr7:332438 | 1.30E-218 | dispersed | |
Cone5ag1652 | Cone-Chr5:11710174 | Cone7ag0077 | Cone-Chr7:332438 | 6.54E-169 | dispersed | |
Cone5ag1653 | Cone-Chr5:11714681 | Cone7ag0077 | Cone-Chr7:332438 | 3.58E-181 | dispersed | |
Cone6ag0951 | Cone-Chr6:4980591 | Cone7ag0077 | Cone-Chr7:332438 | 6.52E-170 | dispersed | |
Cone7ag0077 | Cone-Chr7:332438 | Cone9ag0959 | Cone-Chr9:4798124 | 7.27E-167 | dispersed | |
Cone14ag0676 | Cone-Chr14:3489720 | Cone7ag0077 | Cone-Chr7:332438 | 4.41E-113 | wgd | |
Cone4ag0084 | Cone-Chr4:406201 | Cone7ag0077 | Cone-Chr7:332438 | 5.90E-280 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
82990 | PF04852 | DUF640 | 7.60E-65 | No_clan | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone7ag0077 | - | - | - | 0.0 |