Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag0081 ATGGCAGGTCCACATCCACCAGAACAAGCATATAGTATCATAAGTCTCTGCCTCAGTCTTCACCTCCTAGTTCTGTTCTCCATTCATTTCTCGACTAATACAAGGCCTAAATTTTCTTTTTCCGAGCAACAAAGAGATAAGATGGCCTCCTTGGCAGCATCAACAGCCGCTGCCTCCCTTGGCATGTCGGAAATGCTCGGAAATCCCCTCAAATTTAGCGGGGCTGCCGCCAGGTCAGCTCCAAGCACTTCCAGTCCGGCCACCTTCAAGACCGTTGCCCTCTTCTCCAAGAAGAAGGCAGCCCCACCTAAGTCAAAGCCTGCACCTGCAACTCCGGAAAGTGACGAGCTTGCCAAGTGGTATGGTCCAGAGAGGAGGATTTACTTGCCCTCAGGACTCTTGGACCGGTCCGAGATTCCTGAGTACTTGACCGGAGAGGTCCCCGGAGATTATGGTTATGATCCTTTTGGTCTGAGCAAGAAGCCAGAAGACTTTAGCAAATACCAAGCATATGAGCTGATCCACGCACGCTGGGCCATGCTCGGGGCTGCCGGCTTTATCATTCCCGAGGCATTCAACAAATTCGGTGCCAACTGTGGTCCTGAAGCTGTTTGGTTCAAGACAGGAGCTCTCCTTTTGGATGGGAACACATTGAACTACTTCGGCAAGAACATTCCCATCAATCTCATCGTTGCTGTAGTTGCTGAGGTTGTCCTTCTTGGCGGTGCCGAATATTACAGAATTACTAATGGATTGGAATTGGAGGATAAGCTCCACCCAGGCGGTCCTTTCGATCCGTTGGGTCTAGCAAATGATCCGGACCAGGCTGCAATTTTGAAGGTGAAGGAGATAAAGAATGGTAGACTGGCCATGTTTTCGATGCTCGGTTTCTTCATTCAAGCTTACGTTACAGGAGAAGGTCCCGTCGAAAACCTTGCAAAGCATCTTAGCGACCCTTTCGGAAACAACTTGCTCACTGTCATTTCTGGAAATGCTGAAAGAGCTCCTACTCTGTGA 1017 49.66 MAGPHPPEQAYSIISLCLSLHLLVLFSIHFSTNTRPKFSFSEQQRDKMASLAASTAAASLGMSEMLGNPLKFSGAAARSAPSTSSPATFKTVALFSKKKAAPPKSKPAPATPESDELAKWYGPERRIYLPSGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPEDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLIVAVVAEVVLLGGAEYYRITNGLELEDKLHPGGPFDPLGLANDPDQAAILKVKEIKNGRLAMFSMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERAPTL 338
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 361283 363469 - Conep07aG0008100.1 Cone7ag0081 440677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag0081 338 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 66 326 IPR001344 GO:0009416(PANTHER)|GO:0009535(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0009941(PANTHER)|GO:0010287(PANTHER)|GO:0016020(InterPro)
Cone7ag0081 338 Gene3D Chlorophyll a/b binding protein domain 127 338 - -
Cone7ag0081 338 Pfam Chlorophyll A-B binding protein 140 301 IPR022796 -
Cone7ag0081 338 FunFam Chlorophyll a-b binding protein, chloroplastic 127 338 - -
Cone7ag0081 338 SUPERFAMILY Chlorophyll a-b binding protein 138 328 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone7ag0081 Cone-Chr7:361283 Cone9ag0912 Cone-Chr9:4480977 3.94E-70 dispersed
Cone4ag0090 Cone-Chr4:436412 Cone7ag0081 Cone-Chr7:361283 1.60E-202 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag0081 K08916 - vvi:100246457 506.138