Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag0084 ATGGTTCTTATGGAGGTGAAAAATAAATTTCTTGCGGAACTTGAAGCTATGGAGTTTCCAAGGGCTCGAGCAGTCCGAGCACTTTATCATACCGGTAACGCTAGCTGTGAGGATGCTGTAAATTGGATCGTCGATCATGAGAACGATCCAGATATCCATCAAATGCCTCAGGTAGCAATAGATATTGATATTGAATCCCCGGAACCGGTTCGTATGACTGAAGAAACAAAAAGGAACACACAGGAACTACGGGACCGGATACGCGAGAAAAAGGCAGAGGAAGAAAAGAGACCAGAAAGACAGAGAGAAAAGGAAAGGGTTCGTGCTGGCAAGGAACTTACCGGGGCAAAGAGAGTAGCAGAAGAAAATGAAAGAAAACGTTATTTAGACTCATGGAAGGCTGAGAAAGAGGAGGAGAAAAAGGCAAGGGAAACAATTCTACAGAAACTTGGTCAAGATAAGGCAGAGAGGAGGAGAAAACATGGGCTGCCACCAGAAAGGCGGCCTGAAGATGAAAAACCTTTCATAAATGTTGCACCGAAAAAAGTGAGTAGTTCTTCCCTTATGTCTGTTGAGAAGGCTGGCTCCATGAGAGAATGTTTAAGATCTCTCAAGCGTTATCACAAGGATGATGCTAGCAGAGTTAGACGAGCCTTCCAAACTCTTTTGGTCTATATCAGAAACGTCGCGAGAAATCCCGATGAGGAAAGGTATAGGAAGATTCGACTGAGTAATCCAGTATTCCAGGATAGAGTTGGGAGTTTAAGCGGAGGTATTGAGTTTCTCAAGCTATGCGGCTTTGAGAAAGTAGGGACCGAGTTCCTTTATCTTCCCCGTGACAAGGTTGACATGGCACTACTAAACGGTGCTGGATCTCAATTACAGTCTGCGATCACTAATCCTTTCTTTGGACTTCTATGA 921 44.19 MVLMEVKNKFLAELEAMEFPRARAVRALYHTGNASCEDAVNWIVDHENDPDIHQMPQVAIDIDIESPEPVRMTEETKRNTQELRDRIREKKAEEEKRPERQREKERVRAGKELTGAKRVAEENERKRYLDSWKAEKEEEKKARETILQKLGQDKAERRRKHGLPPERRPEDEKPFINVAPKKVSSSSLMSVEKAGSMRECLRSLKRYHKDDASRVRRAFQTLLVYIRNVARNPDEERYRKIRLSNPVFQDRVGSLSGGIEFLKLCGFEKVGTEFLYLPRDKVDMALLNGAGSQLQSAITNPFFGLL 306
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 370321 377459 - Conep07aG0008400.1 Cone7ag0084 440680
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag0084 306 CDD PUB_UBA_plant 201 306 - -
Cone7ag0084 306 PANTHER F13M7.16 PROTEIN 1 306 - -
Cone7ag0084 306 Pfam UBA-like domain 9 53 IPR015940 -
Cone7ag0084 306 SUPERFAMILY PUG domain-like 206 302 IPR036339 -
Cone7ag0084 306 CDD UBA_PUB_plant 5 52 - -
Cone7ag0084 306 SUPERFAMILY UBA-like 6 55 IPR009060 GO:0005515(InterPro)
Cone7ag0084 306 Gene3D - 8 53 - -
Cone7ag0084 306 Coils Coil 73 97 - -
Cone7ag0084 306 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 5 46 IPR015940 -
Cone7ag0084 306 Coils Coil 129 149 - -
Cone7ag0084 306 Gene3D - 199 296 - -
Cone7ag0084 306 MobiDBLite consensus disorder prediction 71 126 - -
Cone7ag0084 306 Pfam PUB domain 214 283 IPR018997 -
Cone7ag0084 306 SMART PGNneu 217 279 - -
Cone7ag0084 306 MobiDBLite consensus disorder prediction 147 173 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag0410 Cone-Chr4:1864068 Cone7ag0084 Cone-Chr7:370321 7.79E-91 dispersed
Cone6ag0375 Cone-Chr6:1826523 Cone7ag0084 Cone-Chr7:370321 3.07E-08 dispersed
Cone7ag0084 Cone-Chr7:370321 Cone9ag0404 Cone-Chr9:1870228 1.08E-07 dispersed
Cone7ag0084 Cone-Chr7:370321 Cone7ag0399 Cone-Chr7:1775254 3.25E-102 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag0084 K24348 - csv:101210384 350.903