Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone7ag0095 | ATGGCGTCGTCTCTGATATCGAATTCGGTTTCGAATTCTAATCGATCACGGGACACTTCAAGAAGAAGAAAGACGAAGAGAACACAGGGAGTCAAAGATGGTGGTGGTGGTGATGATCGGACTCACCTCAGATGGAAATCCCAGTCGCAGGAGCAAATCTACTCATCGAAACTGGCTCAAGCCCTGAGAAAAGTACGGATCAGCCCGTCTCCTTCCCGGTCCAATCACGAGGCTAGACGCTGCGGCAAAGTCGTGCGGGAGGCCGCGGACAGAGTCCTGGCGGTGGCCGCTAAGGGACGGACCAGATGGAGCCGCGCGATCTTGACCAATCGTCTCAAACTCAAGTTTAGGAAGAAAAACAGAAGGCAGCAGAGAGTGTCTGCCTTGGCGAATACCCGAGCGAAGAAGAAACCTAGCGTGAGCGTATTGCGTTTGAAAGGAAAGTGTCTGCCAGCTGTACAGAGAAAAGTACGGGTTCTCAGCCGCTTGGTACCCGGTTGCCGGAAGGAGCCGTTGCCGGTGGTTCTGGAAGAAGCTACTGACTATATTGCTGCTCTTGAGATGCAGGTTCGAGCAATGAAGGCTCTCACTAACCTCCTCTCCGCCGCCGGATCCAGTTCCCCACCGTCGACCTGA | 636 | 54.09 | MASSLISNSVSNSNRSRDTSRRRKTKRTQGVKDGGGGDDRTHLRWKSQSQEQIYSSKLAQALRKVRISPSPSRSNHEARRCGKVVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKKNRRQQRVSALANTRAKKKPSVSVLRLKGKCLPAVQRKVRVLSRLVPGCRKEPLPVVLEEATDYIAALEMQVRAMKALTNLLSAAGSSSPPST | 211 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 417925 | 418978 | - | Conep07aG0009500.1 | Cone7ag0095 | 440691 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone7ag0095 | 211 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
| Cone7ag0095 | 211 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 156 | 203 | IPR036638 | GO:0046983(InterPro) | |
| Cone7ag0095 | 211 | PANTHER | TRANSCRIPTION FACTOR IBH1-LIKE 1 | 45 | 200 | IPR044660 | GO:0006355(InterPro) | |
| Cone7ag0095 | 211 | MobiDBLite | consensus disorder prediction | 1 | 50 | - | - | |
| Cone7ag0095 | 211 | CDD | bHLH_AtIBH1_like | 142 | 197 | IPR044549 | GO:0006355(InterPro) | |
| Cone7ag0095 | 211 | Coils | Coil | 176 | 196 | - | - | |
| Cone7ag0095 | 211 | MobiDBLite | consensus disorder prediction | 29 | 46 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone1ag1557 | Cone-Chr1:57413133 | Cone7ag0095 | Cone-Chr7:417925 | 1.77E-38 | dispersed | |
| Cone3ag0849 | Cone-Chr3:4369602 | Cone7ag0095 | Cone-Chr7:417925 | 7.75E-39 | dispersed | |
| Cone5ag0081 | Cone-Chr5:396828 | Cone7ag0095 | Cone-Chr7:417925 | 4.02E-40 | dispersed | |
| Cone14ag0710 | Cone-Chr14:3874108 | Cone7ag0095 | Cone-Chr7:417925 | 1.25E-72 | wgd | |
| Cone15ag0723 | Cone-Chr15:4086223 | Cone7ag0095 | Cone-Chr7:417925 | 1.47E-72 | wgd | |
| Cone4ag0100 | Cone-Chr4:482564 | Cone7ag0095 | Cone-Chr7:417925 | 7.81E-112 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone7ag0095 | - | - | - | 0.0 |