Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag0127 ATGGACATCTCTCTCGTTGCTGAATCTGTTTCAATTGCCACCAATCTGAGCCTGGGGTTTGCCAAGACGATCCTTATTCCTCGTCACGATTCCACCTCCAATAGCTCCCCCGTCTTCATCTCCGATTCAGCTTCAGATCAGTATTCATCCGCTTCATCTGCTATAGCTCATCAAATTTCAGGCGCAATATTCCCCGTCGATGCCCTCGCTCCACCTCGGGCGAAATTTAACACTGATAGAACCGCTCGTAAGACACTTTTAAGGAAGAAGCGGCGTACGAGGCGGAGGTCGTTTAGCGGTGAGTCTGAGGATACAGAGGACGATGGGTTGGGGGGTGACGGATTTTACGGTCCTTTTGGTGGAGGGAGTGGTGGAGATGGTCGGGGATGGAACTCCGACCGATTTGGATGGAATAGTTGGGACGACTCCTCGTCCCCTTCTTATGGTCCAGCTTCTAATTTCGTTTACGAGGTGATCTATTGGATAGCACTTTCGAATTGTGTACATTTCGCGTTCAAGAAGGTTATGCGGATCGTAACAGATTGTATTAGCCATGCAGAGAGGGAGAAGGCGGGATGA 579 49.91 MDISLVAESVSIATNLSLGFAKTILIPRHDSTSNSSPVFISDSASDQYSSASSAIAHQISGAIFPVDALAPPRAKFNTDRTARKTLLRKKRRTRRRSFSGESEDTEDDGLGGDGFYGPFGGGSGGDGRGWNSDRFGWNSWDDSSSPSYGPASNFVYEVIYWIALSNCVHFAFKKVMRIVTDCISHAEREKAG 192
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 535466 536283 + Conep07aG0012800.1 Cone7ag0127 440723

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag0127 192 MobiDBLite consensus disorder prediction 80 118 - -
Cone7ag0127 192 PANTHER F3E22.8 PROTEIN 1 190 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag0127 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag0132 Cone-Chr4:602530 Cone7ag0127 Cone-Chr7:535466 1.18E-110 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g145 . . Bda03g01153 . Bpe04g01098 . . . Cmo08g01216 Cmo17g00332 . . . . . . . . . . . . . . Cla06g00459 Cam06g0490 Cec06g0493 Cco06g0492 Clacu06g0476 Cmu06g0477 Cre06g1250 . . Cone7ag0127 Cone4ag0132 . Csa06g01778 Chy11g01534 . . Blo07g00166 . . . Bpe13g00675 . Bma06g01489 Sed09g0261 . . Cma08g01244 Cma17g00345 Car08g01118 Car17g00314 Cpe12g00293 Cpe17g00039 Bhi12g02033 Tan06g2708 Cmetu11g1448 Lac11g0884 Hepe03g0080 . Lcy12g0763 . . . . . . . Lsi09g01455 . . Cme11g02038
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007084 1 1 1 1 2 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 2 1 1 37