Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag0144 ATGGAGGAAGCCATTTCCAGAATCATCACAGAGCTCGAAGAAGCCCAACACCTTAACAATACTACTAACCCACAACCACATTCTTCTTCACCACCGCCACCTCTTTCCGAGGTAACTCTCCTCGACCTTCAAACCCTCTCCAACGACAATGATTCTGAATCTATCGACCTTATTTTCCAGAATCTGGCTTCCAAGTCCCTCTCTCCGTCATCTCTCGTCCCTCCACTCGCCTCCACCATGGATCTGGGCCCCACCCATCTATCCCTCTTAGCTTCTCAAGTTTACCTCTCTCTGCTCTTATCCCCAAATTCGCCCGTCTTTACTCTCTTCACTCCCATGTCTTTTCTCTCCCTTCTCAGCTCTATTCGTAGATCTCTCAAGCGTCAAACACCAGTGTCGCTGCCTGATACAGAAGATCAGACGCAGAAGAAAAAGAGGGGCGCCAAGGCGAGAGGTTCAAGGAATGGTGCAAAGAATTCTTTCATTGGGCGTGATGATGGTGAAGCAGGTGAGTTTGATGTTAGAGTTTTGTTTTCTGTGTTGGAAAGGTTGGAACTTGTAATGGGTCTGATCCATTTAGACCGTTTTCCAGATAGTTTGAAGTCTTTAGTTCAAACAATGGCAGAAACTCCATCAATGGCATATGAACTCTGTGGTAACTCTAGTGCCTATAACAAAATTATTGATTTATGTTCTCGGGTTTTGAGCAAGGTCTTAAGCCCTGATCATGGTGACCAGGCAAATACAGCGAGTGTCATTTTGAAGGCGTTGACACCATTAATTTTCAGTAGTAGATCGCAGTTGAGGGCATTTGGTTTAGGCTTTGTGATGAGTCGAATGATAAGTATGGCAAAGGAATCTGATGATGTTAAGAAAGCACTGGTAAATTTTCCACGGTACTTGGCTAATAAGGTGCCTGAGAAGTCTGAGCCTAGAGCTTTAGCTGCAGAGGCGATTATGCAGATTATTAAGGCCATGGATTTGACAGATCAGGTTGGTTTTGTGGACTATGTGGTGAAGATGACACAAGGAAAGGCTAACCTTAGGCTCTTGGCTGTTGACCTTATTCAAACGCTGATAATGTCCTTGAGAGGTGCAGCAGGCTTGAACTCGGAAACTGAAGAGATAGATTCATGGAATTTGAGGTGTTTGGAGGCTTTGATCAAACGTTGTTCAGATGCAAGTGCCGTTATTAGAACCCGGGCTTTGTCTAACTTGTCTCAGCTTGTGGTTTTCTTGTCAGATAATGAAAAGAATAGGTCTTTATTGAAAAATGTCATGGGGTTTGCAAACAAAGCAGAAGAGGGTAGGATGAATGGTCTTTTGAGAAAAAGGTGTATGGATGAAAAAGCAGGAGTCAGGAAGGCGGCATTGAATCTTGTCACTAAGTTGATAGCTCTGTTGGGTGGTGTATTTGACGATGTTTTACTCAAGACTATGGGAATGGCTTGTTCAGATCCTCTAGTTAGCATAAGAAAAGCCGCAATTGCAGCTCTTTCAGAGGCCTTCAGAACTTCATCAGATGAAAGTGTAATCTCTGAATGGCTACACTCTGTTCCGCGATTAATAACTGACAATGAATCTAGTATTCAAGAAGAGTGTGAACATCTTTTCTTGGAATTGGTCTTGGACCGGATCTGTAAAGTTGGTGCAAATTCATCAAACAATGGATCTGCTAGCTATTCAAATGCTAAAGGAAAGGGTTTAGATAGTGACCTTGACATGTTAATCCCCAAAGGAGTACTAGGTCTCCTAAAAGAGATATGTAATGGGGAGGTCACACCATGGGTGAAGAAGATTTGCACAATCCTAGGTAAGAAGAGAAAGTTGAAGCCTTCTATTGCAATTTCACTTAAGAATATCATAAATATGTCTGAATCTCTCTGGTTGAGCAATTCAATGCCTATAGAAAAGTGGAAATCCCCTCCAGGTGCTTGGTTTCTACTTTCCGAGGTGTCAGTCTACCTTGTAAAATCAGTTGATTGGGAGTTTCTTTATCATCATTGGGAACTTCTTGACAAGCATGGAGTGTCAGGCGAATTTAATGGCTTACTTGCTCAAGGAGGTGCCTATGACATGGAAGATGTTGTTGACCCAAATTCTTTTGCATTTGCGGATTCTGTTTTTCTCTTGCAAACAATTTCTAATGTTTCTGTGGGGCTGCCTGATGAACCTGCAGGCGATTTAGCTCTCAACTTGCTTAAAAGGGTTGAAGAGTTCAATATGCATGACACAGAGGTTAATGCTCATGTTAGAGCACTTAAAACATTATGCAAAAGAAAGGCTTCAAATCCTGATGAGGCTGAAGCACTTGTCCAAAAGTGGGTGGGTGAGATTCTTTTCAAGGCTTTCCAAGTTTTAGAAAAGTACATTTCAGAGGATTTGAAGGTTGGGGGCAGCTTTATTACCCCACTGAAAAGCAGAGGAAGTAGAAAGGAAAAGATGAAAGCATCCAAGTGCAAGCAGTTGTCGAAAACAGTTGCAGCGGTTTACACCATTGGGTCTTTGGTTCTGGCTTGTCCAACAGTTAATACAGCTACTTTTGTTCCACTATTGCACAAGATCATCACTTCTGGGAGTTCTGATCTAAGGTTAAGTAAATTACCCGGCCCTGCAGTTTCTTATAAGGAAACAGCACCTGCTTTGTACCTTCAGGCTTGGTTGACAATGGCGAAGATTTGCCTGGCTGATAGCAAAGTTGCTAAGAGTTATATTCCTTTGTTTGTACAGGAACTTGAAAAGAGTGATAATACAGCTCTTCGTAACAATCTGGTAGTGACGATGGCAGATTTTTGTGTACGCTATACTGCATTAGTCGACTGTTACATTACAAAAATCACCATGTGCCTCTGTGATCCCTGTGAGCTTGTACGGAGGCAGACTTTCATATTGCTCGCTAGATTATTACAGAGGGACTATGTAAAGTGGAGAGGGGTTCTATTCCTCAGATTTCTTCTCTCGCTCGTCGACGAGTCAGAAAAGATACGCCAACTTGCCGATTACCTCTTTGGAAATATATTAAAAGTCAAAGCACCTCTTCTAGCTTACAACAGTTTTGTTGAAGCAATATTTGTTCTCAATGACTGCCATCCCCATGGTGGGCATACTAATTCTGAGATTTCACGAACAGAGAGACGGCTTTTCTCTATCCGGGGTAATGATGAGAAATCAAGGTCTAAACGCATGCACATCTACACTTCTCTGCTCAAACAAATGGCTCCAGAGCACCTCTTGGCAACTTTTGCAAAGCTATGTGCAGAGATTCTAGCCTCAGCTTCTGATGGTATGCTCAAAATCGAAGATTCTAAAGGACAGTCTGTTCTTCAAGATGCTTTCGAGATTCTCTCTTGCAAGGAGATTCGGATCCAGTCAACTCGTGGATCAACAGAATCAGCAGATATGGATGAGGAAAGTGCAGATGCTGGAGGAGTATCTGCAGCTGCTGCGAGAGGACGGGCTATAACTCAAGCAGTTAAAAAGGGTCTTATCCAAAACACAATCCCCATTTTTATAGAGTTGAAAAGGTTGCTAGAAAGCAAGAACAGTCCTCTCATAGGGCCCCTTATGAAGTGCCTCATAGTCCTTCTTAAGGATTACAAGAATGAGATTGACGACATGTTGGTTGCAGATAAGCAGCTTCAGAAAGAGCTTATTTATGATATGCAGAAGTATGAATTGGAGAAAGCTATGTCAACTGCAGTTAATATGCAAACATCAGGTGGGCATTCTTCGCCTGAGTGTTCTAGAGATGGTAGCGGGAGAAATGCACAGAATGACCCGAGATTAGCATTGGCTATAGCGGATGCAAAGGCTGAGAAAACGGTTCGGTCTGTACTTAAAGAAGTGAGCAAAGGAATCTCTTCCCCGCGTTTTGGTTCTTTGAGTGTTCCTAAGCTTAAGACTGGAGGAAGCAGTTCTGGGGGAAATATATCTCAAAATGTAATTGAATCTGTGAGGAAGATACAGTCCTTTGATTCTGATGAAGAGAACTGA 3993 42.57 MEEAISRIITELEEAQHLNNTTNPQPHSSSPPPPLSEVTLLDLQTLSNDNDSESIDLIFQNLASKSLSPSSLVPPLASTMDLGPTHLSLLASQVYLSLLLSPNSPVFTLFTPMSFLSLLSSIRRSLKRQTPVSLPDTEDQTQKKKRGAKARGSRNGAKNSFIGRDDGEAGEFDVRVLFSVLERLELVMGLIHLDRFPDSLKSLVQTMAETPSMAYELCGNSSAYNKIIDLCSRVLSKVLSPDHGDQANTASVILKALTPLIFSSRSQLRAFGLGFVMSRMISMAKESDDVKKALVNFPRYLANKVPEKSEPRALAAEAIMQIIKAMDLTDQVGFVDYVVKMTQGKANLRLLAVDLIQTLIMSLRGAAGLNSETEEIDSWNLRCLEALIKRCSDASAVIRTRALSNLSQLVVFLSDNEKNRSLLKNVMGFANKAEEGRMNGLLRKRCMDEKAGVRKAALNLVTKLIALLGGVFDDVLLKTMGMACSDPLVSIRKAAIAALSEAFRTSSDESVISEWLHSVPRLITDNESSIQEECEHLFLELVLDRICKVGANSSNNGSASYSNAKGKGLDSDLDMLIPKGVLGLLKEICNGEVTPWVKKICTILGKKRKLKPSIAISLKNIINMSESLWLSNSMPIEKWKSPPGAWFLLSEVSVYLVKSVDWEFLYHHWELLDKHGVSGEFNGLLAQGGAYDMEDVVDPNSFAFADSVFLLQTISNVSVGLPDEPAGDLALNLLKRVEEFNMHDTEVNAHVRALKTLCKRKASNPDEAEALVQKWVGEILFKAFQVLEKYISEDLKVGGSFITPLKSRGSRKEKMKASKCKQLSKTVAAVYTIGSLVLACPTVNTATFVPLLHKIITSGSSDLRLSKLPGPAVSYKETAPALYLQAWLTMAKICLADSKVAKSYIPLFVQELEKSDNTALRNNLVVTMADFCVRYTALVDCYITKITMCLCDPCELVRRQTFILLARLLQRDYVKWRGVLFLRFLLSLVDESEKIRQLADYLFGNILKVKAPLLAYNSFVEAIFVLNDCHPHGGHTNSEISRTERRLFSIRGNDEKSRSKRMHIYTSLLKQMAPEHLLATFAKLCAEILASASDGMLKIEDSKGQSVLQDAFEILSCKEIRIQSTRGSTESADMDEESADAGGVSAAAARGRAITQAVKKGLIQNTIPIFIELKRLLESKNSPLIGPLMKCLIVLLKDYKNEIDDMLVADKQLQKELIYDMQKYELEKAMSTAVNMQTSGGHSSPECSRDGSGRNAQNDPRLALAIADAKAEKTVRSVLKEVSKGISSPRFGSLSVPKLKTGGSSSGGNISQNVIESVRKIQSFDSDEEN 1330
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 595210 600089 - Conep07aG0014500.1 Cone7ag0144 440740

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag0144 1330 MobiDBLite consensus disorder prediction 1292 1312 - -
Cone7ag0144 1330 Coils Coil 1196 1216 - -
Cone7ag0144 1330 MobiDBLite consensus disorder prediction 1236 1255 - -
Cone7ag0144 1330 Pfam Sister chromatid cohesion protein PDS5 protein 344 538 - -
Cone7ag0144 1330 MobiDBLite consensus disorder prediction 129 162 - -
Cone7ag0144 1330 SUPERFAMILY ARM repeat 296 1023 IPR016024 -
Cone7ag0144 1330 MobiDBLite consensus disorder prediction 1298 1312 - -
Cone7ag0144 1330 MobiDBLite consensus disorder prediction 1236 1257 - -
Cone7ag0144 1330 Gene3D - 251 546 IPR011989 -
Cone7ag0144 1330 Pfam non-SMC mitotic condensation complex subunit 1 920 1094 IPR032682 -
Cone7ag0144 1330 PANTHER CONDENSIN 21 1329 IPR026971 GO:0000779(PANTHER)|GO:0000799(PANTHER)|GO:0007076(PANTHER)|GO:0007076(InterPro)|GO:0010032(PANTHER)|GO:0042393(PANTHER)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag0144 K11491 - - mdm:103403748 1587.01
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g291 . Blo12g00017 . . Bpe04g01135 . . . . Cmo17g00320 . . . . . . . . . . . . . . Cla06g00475 . . Cco06g0513 . Cmu06g0495 . . . Cone7ag0144 . . . Chy11g01515 . . . . . . . . . Sed12g1134 . . . Cma17g00330 . Car17g00304 . . Bhi12g02048 Tan06g2683 Cmetu04g0061 Lac11g0844 Hepe03g0098 . Lcy12g0737 . . . . . . . Lsi09g01434 . . Cme11g02016
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010431 2 2 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 0 1 1 1 1 2 1 2 1 1 31