Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag0155 ATGCATGGAGAAATTTTAGTCAATCGTGAAGGAGAACTTAAAGTAAGCTTTGGTTATCAATGCAATAGTGGAAGAGGTAGTGCTTATGATGTTTCTGATGGATTTGAAATCCATCCTGAACTTCAAAGGACCAGTAGTTTCTCTTGCTTGTCTGGTGCTGCCTTAAGTGCTAATGCTACCTTAGCTAACACAAATATTTGTAAGGGTCTTATAGGGACAGAAATACTTCCTAGTTGGGACTCTCCCAAGTCATTTCGTAAGGTTCCGTCTTCTCCAAATCTCTCAAAGTTGGATATTCTCTCTTCCTCTCTCCAGAGTAGCTTATCAAATTTAAGTTGCAGCCCCTCCACTCCAACTGAGTGCGATTCGTTTTTGTTGAAACCCATGAGCGCACCTTCAGGAAGCGAAGCCTTCCTTAATTCGATGGAATTACAAGTGGCAGGTGGAGCTGCTGGTGAAGACAGAGTCCAGGCTGTTTGTTCTGAGGAAAATGGGTGGCTCTTTTGTGCAATTTACGATGGCTTTAATGGAAGAGACGCTGCTGATTTCCTGGCTGGAACATTGTATGAAACTATCATATTTTACTTTAAACTTCTAGACTGGGAAAATAACCAGGAGTTTGATGGGTCACTGCAGTATATCTTGGATGATCACGATATTAGCTGCAAAGAAAAATCTCTTTCAAAGTTTCATTGTCAAGTGGATTCAGATGTCCATAATGCATATACCAAAGCAGAACTGGTTAATGATCCATTTAGGCATGCGGTTCTTGATAGTCTAGAACGTGCCCTTAGTCAGGCAGAGATTGATTTTCTCCACATGGTTGAACAAGAAATGGAAGACCGGCCTGATTTAGTGTCTGTTGGATCTTGTGTTTTGGTTGTGCTTCTTCATGGAAAGGATTTATACACACTGAATCTTGGTGATAGTAGAGCAGTAGTGGCAACCTGTATTGAAGGTGAGGAGGACATGTATGGGAATGAGAGATTGAAAGCAATCCAGCTTACTGATAGTCACACTGTTGACAATGAAGCAGAAAGAACACAGCTTGTGCACGATCATCCTGATGATCCCATGACTGTTGTGGGTGGTAAAGTCAAAGGAAAACTTAAGGTAACTCGTGCTTTTGGAGTTGGCTACTTAAAGAAGAAAAATCTTAATGATGCATTGATGGGAATTCTTCGAGTTCAGAACCTGAAAAGCCCTCCCTATGTGTCTACTCAACCATCAATGAATGTGCATAGAATATCGAAGTCTGATCGCTTTGCTATAGTTGCAAGCGATGGCCTATTTGACTTCTTCAGTAACGAGGAGGCATTAAAGCTCGTTCATTACTATATCTTGACCAACCCTACTGGTGATCCGGCAAAATTTCTGTTGGAGAAGCTTGTACTCAGAGCCGCTGATTGTGCAGGTTTTAGCATGGAAGAATTGATGAACGTTCCAGCCGGCAGGAGAAGAAAATATCACGATGATGTAACTGTGATTGTCATCATTCTCGGAACAAATCAGCGTACCACCAAGGCATCAACCTTTGTGTAA 1542 41.7 MHGEILVNREGELKVSFGYQCNSGRGSAYDVSDGFEIHPELQRTSSFSCLSGAALSANATLANTNICKGLIGTEILPSWDSPKSFRKVPSSPNLSKLDILSSSLQSSLSNLSCSPSTPTECDSFLLKPMSAPSGSEAFLNSMELQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLYETIIFYFKLLDWENNQEFDGSLQYILDDHDISCKEKSLSKFHCQVDSDVHNAYTKAELVNDPFRHAVLDSLERALSQAEIDFLHMVEQEMEDRPDLVSVGSCVLVVLLHGKDLYTLNLGDSRAVVATCIEGEEDMYGNERLKAIQLTDSHTVDNEAERTQLVHDHPDDPMTVVGGKVKGKLKVTRAFGVGYLKKKNLNDALMGILRVQNLKSPPYVSTQPSMNVHRISKSDRFAIVASDGLFDFFSNEEALKLVHYYILTNPTGDPAKFLLEKLVLRAADCAGFSMEELMNVPAGRRRKYHDDVTVIVIILGTNQRTTKASTFV 513
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 639726 643145 + Conep07aG0015700.1 Cone7ag0155 440751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag0155 513 ProSiteProfiles PPM-type phosphatase domain profile. 138 500 IPR001932 -
Cone7ag0155 513 SMART PP2C_4 129 498 IPR001932 -
Cone7ag0155 513 Pfam Protein phosphatase 2C 260 450 IPR001932 -
Cone7ag0155 513 SUPERFAMILY PP2C-like 152 501 IPR036457 -
Cone7ag0155 513 CDD PP2Cc 151 500 IPR001932 -
Cone7ag0155 513 PANTHER PROTEIN PHOSPHATASE 2C 148 498 IPR015655 GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0006470(PANTHER)
Cone7ag0155 513 Gene3D - 128 509 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone7ag0155 Cone-Chr7:639726 Cone8ag0618 Cone-Chr8:6075605 1.19E-62 dispersed
Cone4ag0153 Cone-Chr4:707124 Cone7ag0155 Cone-Chr7:639726 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag0155 - - - 0.0