Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag0159 ATGGAGGAGAATAATACTGAGCTTGTGGAACGTCAAGCTTGCCTCTATATGTATGATAGCAATAACAATGGTCCTGACGTTAACTTCTCCTTAAACATTGAGGAGAGGCTCCAACATGCTCTAGGTCATCTTCAAAAAGATTTTGAAGGTGGCTTTTCTGCTGAGAACTTGGGGGCAAAATTTGGGGGGTATGGTTCATTTTTACCCACTCATGAACGTTCACCTTCTATTTGGTCTCATTCGAAAACTCCGCAAAGGATTTGCAATACAGAAAAATCATCTGACAGTTTACCCTTAGAGAATTCAAAAGCTTCTTCAAATTTACCTCCACCTCTGAGGCCTGTGGCTGCTTCCTGTGGTGCCAATCTATGGCATAATACAAGGGCAGCTGTTGGAGATGTTTCTGGAAAGCAAGAGTTATGTTGTCCTTCTACTCAAGCTACTCACGGGTGTCCTTCGAAAAATGAAACTTCAATTAGATCAGGCAATCTTACTGACCAAGGATCTTTGAAGGTTCGAATCAAAGTTGGTTATGACACCACTGCACCAAGAAATGCTGCTCTATATAGTGGCCTTGGCCTTGATGACTCTCCATATTCATCATCTGGAAATGGTCCTGATGAAAAGGAAGGGATGCAACCTATGTCTCTGGATACTTTGGAACAGTCCCCCTATGATATTATACAGGTTATGACTGATTTTGTTGTGCCTGGAGGATTACTGGTATCACCTCTTGCTGATAGTTTGCTTTGGCTCTCGAGGAAGGAAAAGCTCCACAGAGTCGGCAAACCCTTGGGTTCCCCCAAGATCCTCCCTGCATTTCCAACAGCTGCAACCCTAGGTGAGGGCAAGGTATCAAAACATAAGAAAAACAAGTCAAGAGGTAAGGAAGTAAGTGAGGTAGAATTGAAGCATGTTAGCGATAGAAGCCTTGAGAATAATATGAAAATTTTCAAGAATAAAAAATCAAAAAAATTCCCCCCAGAAGGAAAGGAGATTCTGGCTAAAGAGTTAAAATGTGCATCTAACTCCATATCTGGTGGTGGTGATTCCATGGAAGAAATTTGTAGGTTGTCTGATGTTTCTAGGGAGTTCAGTAAGGTTCGGGTGAAAGATACATTATTTTCCTCTGAATCAGGAGAGCATTCGCTGAAATCAATTTCTGGGAAGGAGTGTCACAAGAATGACATGGAATATTCGAGGTGTGGTTTAGGGGAAAAGGTTGTGGAGCACAAATTAGTAAATTCTTACAATGATAATCTAGTTGACTTTAGAGATGATGGCAGGTTGGAGTGTAAGAGAACTTCTGCCCCATTGAAAGACCACTGTGACATATCCAAATCAACTGAAGGTTTAGATTTACACGGAAAAGCCTCTGAGAGTGCTAACAGTCACATGGAGGGAGAAAATCATATACCGTCTAGGAAGGAAAAGCCGGCTTATGAGAGCAAGAAGAAGCTAAAGGGTTTGCAAAGTAACAGTGATATTGTGGCTGCTTCAACAAAGGATTGTCCTAGGTTGGAAACAGGAGCAGTAACAAAAGTAAAAAAGAGTGCAAGTTGTCATACTTCTCCCAGTAAAAGTAATATAGATAAGTTAAAACCTCGGATTGATAAGAAAGTCAGAGATAGTCATTTAGATTATTTGCGGATCTCAAATGTGGAAAAGCTAAATGATTGGCCTGATGTCTCTAACTTTGATGATGAGAAAAAGGAATGGTATATAAGGGTAAATAAACCTAAGGAAAAATCAAATGGTTTGGATACAACAGAGAGGGCTTTCGGTGATTGGCGGGAAGGCTCTAACATTGATGATGATGGTGAAATGGAATGGCTTCAAAGGGGAAGTAAACTGAAGGAAAAGTCAAATGGTAATATAATAAACTCTCAAATGGCTGTGGTGTCTGTAACAGATTCACAAAGTGCATCTATGCCTGTTGCTGAAACTGGACCAATTTGTGAAGTTGTTAGTACAACTGTTGCGCCTGTTTTGGTTAAAGATGTTTGGGCATGTTGTGACAGTTGTCAGACATGGCGCCTTCTGCCCTATGGTACAGATGAGAAGAAACTACCTGACAAATGGTTGTGCAGCATGCAAACTTGGCTGCCTGGGATGAACCGGTGTGGCATCAGTATGGATGATTCAGAAAAAGCATTCCATGCATTGTACCAACCTCCAGTCTCTGGGATTCTTAATAACTTAGAAAGTACTACCAATAGAATGAAATTAGGAGTACCTTCTGCCGATGTCAGACACATTAATCACAATAATAAAGACTTCAGTTCCCAAACTATATTGAATCAAAGAAAGAACAAATTTTTTTCGAAGGAACCACAACCTTCATGTGGCAGTGGCTCGTTTCATGTCTTGAACTCTACTAAGACTTTTCTGCAGGAATCTACAAAAAGCAGAAGCTTGAATGACATGAAACATCCTCTGCCAGATTCAAATCATATGAGGAAGTCATTGAATGATACAAATCAAATGAAAATGAAAATGAAAATGAAGAAGGAAGCTGATCAATTTGGTCATGGAGCTGGAAATTCGAAGAAACCTAAGGCAGAAGATATACACTTCTCTGATAGACATCCAGACTCCAAAATAGACCTCGGACAAGCTAGTCTAATTTCAAGTACTGGATTTCCAGCTGGGGCGCATGGGAAAGATATGCAGGAATACAATGAAATTGGTTTTTCTGAGGATAGAACATGTGCCACTAAGGACAAGATACTTCCTTCTGGAAAAAATCTGGGAGAACAAGTTCAGGATTCATCAAGGACCTTGGATGTGACACCAAGCAGCAAAAGGGATTATTTTATGAAGAAACGAAAACTGAAGGAATGGCATGAGAGTCAGAATTGTCAAAATTCTGCACTCGATAGCGGCATGCATTTGGAGGAAAGTAGTGAGAATGGACTCAAAAGGGTCAAGAAGTCAAAGCTATCAAAGACTGGGGCGAAGGATTCCTGTACTGGTGATGCTGACTTTAACTCAAAGAAAAAAGGTATGGTGATGCGAATAAGCACTTCAGGCATTAGAGGTGGTTCGGTTAATCACAGGGGGGAAATGAGAGACTCTGGTAAGGAACATGAAGTCATCAAACCTGGTATGAAAGATGTGTCCAAACAGACTTTGGATGGTGAAGACTCAGTGAGAAGAAATAGAGGATCTAGGCAATTTTCACATGCATCTACTTCAAGCTCTTCAAAAGTTTCAGTGTCTCGTAAGAGTGATATCAAGTTTGATGTAGATACCATGGAGCAATCTGGTAGGTGCTCTGATGGTCTTAATGGTGGTATGGGACATTCAAATGATGGACTGAAGATTAAAATGTCCTCCCATCACAAATTATTGTTGCCTCAAAATGAGTGCTCATCTTTGTGGTCAATGGACAAGGAGAGAGCTTTCACATTTGAGTTTGATTCAGACAAAATGCAGGCTTCTGAACCAGAGGTCAAGGTCTCAAGAAAGAGCATGAACTATGAGCCAGAGGTTGTCCCTGAAAGTGGGCAACGTGATTCTGAAACAGTGGGTGATGTCAAACCGAGTATTCGTGAAAGGCTTGGCTCCAATTTGAGCAGGAATGAGAACAATGGTGTTCATACAAAGGATTTTGCATGGTCAACTGACAATGTAGTGGAAACTCAAGTAAAGGAGGACCTAGAGGGTTCTGAAGTGAGATCATCACTTGCTCTTTGTATAAAAAATGGAAAGGTAACCACCCAGCAGAATCTGATTCTGGAATCTGTGGGTGAGAGTAAGGCTGATATTGTGCCAGTAGAATCAAGGAGTGGGAAATCAAAATATATGCGACATTCTGAAGGTGAAGGTAAACAAGAGAGAGTATCACTTTCTCGACCTCTGCTAGAATCCACAGGTCCTTTTAGGGGATGTCCAATTGAAAATCACAATGATATGTTGAAGGCATCTAAAGATTCTAATCAGAATGGAGTTAGTCATAGTAAAAAACAGCTAATGCCTGATCGACAAGGTTATAGAGATCTTGTTGCATCCAGTCCCAATGGAATGAATTCCTTGAGCCTGGCTGCCAGTAATACACTGAAAAAAGCCCAAGAGCTTAGAGACTATGCCGATCGCCTTAAGAGCTCTGGATTTGATTTTGAAAGTAATGAGGCTTACTTCCAAGCTGCCCTAAAGTTTCTTCATGGGGCTTCACTTCTAGAAGGTGCTAAAAGTGGAAAAAATGGGGAGATGATTCAATTGCAGTTCTACAGTAATACAGCTAAACTTTGCGAAGTTTGTGCTCAAGCGTATGAAAAATGCCAAGAAATGGGCTCTGCTGCTTTGGCTTATAAATGCATGGAAGTGGCTTATATGAGGGTAGTTTACTGTAAACATTCAAGCACAAGCAAAGACCGGCATGAGCTGCAAGCATCATTACAAACAGCTCCCCAAGATGAGTCCCCGTCTTCTTCTGCATCAGATGTTGATAACTTGAACAACCATGCAACAATGGATAGGAGTGCTCTATCAAAGTGTACTGGTTCGCTTGTTACTGGAAGCCATGTGATTCTTGTTCGAAACCGCCCCAATTTCTGTCGGGTGCTCGATTTTACTCAAGACATAAACATGGCAATGGAGGCCTCTAGAAAATCCTTGAATGCTTTTGCAGTTGCTAATGCAACTGCAGAAGAGGCACAATATACTGATTGTGTTGCGTCCATTAGGAGGGTGATTGATTTCAGCTTCCAAGACGTCGAGGAATTCCTCCGTCTGATTGCGGTTGGTTTGGAGGCGATAAGCAGAACAGGTTTTGGTGGTGCTAGAGATTAA 4794 41.24 MEENNTELVERQACLYMYDSNNNGPDVNFSLNIEERLQHALGHLQKDFEGGFSAENLGAKFGGYGSFLPTHERSPSIWSHSKTPQRICNTEKSSDSLPLENSKASSNLPPPLRPVAASCGANLWHNTRAAVGDVSGKQELCCPSTQATHGCPSKNETSIRSGNLTDQGSLKVRIKVGYDTTAPRNAALYSGLGLDDSPYSSSGNGPDEKEGMQPMSLDTLEQSPYDIIQVMTDFVVPGGLLVSPLADSLLWLSRKEKLHRVGKPLGSPKILPAFPTAATLGEGKVSKHKKNKSRGKEVSEVELKHVSDRSLENNMKIFKNKKSKKFPPEGKEILAKELKCASNSISGGGDSMEEICRLSDVSREFSKVRVKDTLFSSESGEHSLKSISGKECHKNDMEYSRCGLGEKVVEHKLVNSYNDNLVDFRDDGRLECKRTSAPLKDHCDISKSTEGLDLHGKASESANSHMEGENHIPSRKEKPAYESKKKLKGLQSNSDIVAASTKDCPRLETGAVTKVKKSASCHTSPSKSNIDKLKPRIDKKVRDSHLDYLRISNVEKLNDWPDVSNFDDEKKEWYIRVNKPKEKSNGLDTTERAFGDWREGSNIDDDGEMEWLQRGSKLKEKSNGNIINSQMAVVSVTDSQSASMPVAETGPICEVVSTTVAPVLVKDVWACCDSCQTWRLLPYGTDEKKLPDKWLCSMQTWLPGMNRCGISMDDSEKAFHALYQPPVSGILNNLESTTNRMKLGVPSADVRHINHNNKDFSSQTILNQRKNKFFSKEPQPSCGSGSFHVLNSTKTFLQESTKSRSLNDMKHPLPDSNHMRKSLNDTNQMKMKMKMKKEADQFGHGAGNSKKPKAEDIHFSDRHPDSKIDLGQASLISSTGFPAGAHGKDMQEYNEIGFSEDRTCATKDKILPSGKNLGEQVQDSSRTLDVTPSSKRDYFMKKRKLKEWHESQNCQNSALDSGMHLEESSENGLKRVKKSKLSKTGAKDSCTGDADFNSKKKGMVMRISTSGIRGGSVNHRGEMRDSGKEHEVIKPGMKDVSKQTLDGEDSVRRNRGSRQFSHASTSSSSKVSVSRKSDIKFDVDTMEQSGRCSDGLNGGMGHSNDGLKIKMSSHHKLLLPQNECSSLWSMDKERAFTFEFDSDKMQASEPEVKVSRKSMNYEPEVVPESGQRDSETVGDVKPSIRERLGSNLSRNENNGVHTKDFAWSTDNVVETQVKEDLEGSEVRSSLALCIKNGKVTTQQNLILESVGESKADIVPVESRSGKSKYMRHSEGEGKQERVSLSRPLLESTGPFRGCPIENHNDMLKASKDSNQNGVSHSKKQLMPDRQGYRDLVASSPNGMNSLSLAASNTLKKAQELRDYADRLKSSGFDFESNEAYFQAALKFLHGASLLEGAKSGKNGEMIQLQFYSNTAKLCEVCAQAYEKCQEMGSAALAYKCMEVAYMRVVYCKHSSTSKDRHELQASLQTAPQDESPSSSASDVDNLNNHATMDRSALSKCTGSLVTGSHVILVRNRPNFCRVLDFTQDINMAMEASRKSLNAFAVANATAEEAQYTDCVASIRRVIDFSFQDVEEFLRLIAVGLEAISRTGFGGARD 1597
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 657388 668937 - Conep07aG0016100.1 Cone7ag0159 440755

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag0159 1597 MobiDBLite consensus disorder prediction 841 863 - -
Cone7ag0159 1597 MobiDBLite consensus disorder prediction 282 302 - -
Cone7ag0159 1597 PANTHER CW-TYPE ZINC FINGER 3 1589 - -
Cone7ag0159 1597 MobiDBLite consensus disorder prediction 1011 1076 - -
Cone7ag0159 1597 MobiDBLite consensus disorder prediction 1161 1180 - -
Cone7ag0159 1597 MobiDBLite consensus disorder prediction 800 822 - -
Cone7ag0159 1597 MobiDBLite consensus disorder prediction 451 491 - -
Cone7ag0159 1597 MobiDBLite consensus disorder prediction 193 214 - -
Cone7ag0159 1597 MobiDBLite consensus disorder prediction 1057 1074 - -
Cone7ag0159 1597 MobiDBLite consensus disorder prediction 1261 1325 - -
Cone7ag0159 1597 MobiDBLite consensus disorder prediction 451 489 - -
Cone7ag0159 1597 MobiDBLite consensus disorder prediction 957 993 - -
Cone7ag0159 1597 MobiDBLite consensus disorder prediction 74 108 - -
Cone7ag0159 1597 MobiDBLite consensus disorder prediction 1261 1283 - -
Cone7ag0159 1597 MobiDBLite consensus disorder prediction 1462 1486 - -
Cone7ag0159 1597 Gene3D - 659 717 - -
Cone7ag0159 1597 MobiDBLite consensus disorder prediction 909 932 - -
Cone7ag0159 1597 Pfam CW-type Zinc Finger 669 713 IPR011124 GO:0008270(InterPro)
Cone7ag0159 1597 ProSiteProfiles Zinc finger CW-type profile. 663 716 IPR011124 GO:0008270(InterPro)
Cone7ag0159 1597 MobiDBLite consensus disorder prediction 1309 1323 - -
Cone7ag0159 1597 MobiDBLite consensus disorder prediction 74 109 - -
Cone7ag0159 1597 MobiDBLite consensus disorder prediction 1018 1056 - -
Cone7ag0159 1597 MobiDBLite consensus disorder prediction 917 932 - -
Cone7ag0159 1597 MobiDBLite consensus disorder prediction 804 818 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag0159 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone20ag0925 Cone-Chr20:6656086 Cone7ag0159 Cone-Chr7:657388 5.50E-66 dispersed
Cone4ag0157 Cone-Chr4:730912 Cone7ag0159 Cone-Chr7:657388 0 dispersed
Cone11ag0861 Cone-Chr11:7137803 Cone7ag0159 Cone-Chr7:657388 1.84E-105 wgd
Cone17ag0496 Cone-Chr17:2444640 Cone7ag0159 Cone-Chr7:657388 4.76E-67 wgd
Cone18ag0697 Cone-Chr18:3731195 Cone7ag0159 Cone-Chr7:657388 8.64E-108 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g330 . . . . . . . Bma05g01045 Cmo08g01190 Cmo17g00302 . . . . . . . . . . . . . . Cla06g00492 Cam06g0529 Cec06g0529 Cco06g0533 Clacu06g0513 Cmu06g0515 Cre06g1286 . . Cone7ag0159 Cone4ag0157 . . Chy11g01485 . . . . . . . . . Sed09g1215 . . Cma08g01217 Cma17g00314 Car08g01090 Car17g00288 Cpe12g00266 Cpe17g00012 Bhi12g02083 Tan06g0860 Cmetu01g0223 Lac12g2393 Hepe03g0115 . Lcy13g0188 . . . . . . . Lsi09g01415 . . Cme11g01992
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003760 1 2 1 2 1 1 3 1 1 1 1 1 2 1 1 2 1 2 2 1 1 2 1 2 3 1 1 2 3 2 46