Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag0167 ATGGAGTCTTCTTCTTCTTCTTCTTCGTCATTCAAGAAATCACGACCGAATCTGAGCCGGGAGAGTTTCTTGTCTAGGGTAATTCGACCAGAAATAGAGGGGAAGAGTTGTCCGATATGCCTTGGAATTATAGAAGGAAGGAGAGCCGTCGTGCTGGCGTCGTGTATGCATGCTTACTGCGAGGAATGCATTCGAAAATGGAGCAGTTTGAAGAGGCGGTGCCCGCTCTGCAACGCCCAATTCGACTCCTGGTTTTCCAAAATCTGTTTCTTTTCTCGAAGCTTTAGCAAAGTGCGACTACCGGCTCTGGATAGTGGGAAAACCATCCATCTTGGAGCTGGTTCGTCTCCTATGAGTGTTCGAAGACTTGGTCAAGTTACGCGGGCGAGAGTGGATAATTATAGCTCGCGGGAAAAGCCAGTGCCATGGCGGCGATCGTTTGGGCGGCCAGGATCTGTATCTGCCGATGTGATTGCTCAACGGAAACTTCAATGGCGGGCGAGCATATACCATGGAAGTTTGCAAGCTGTTCGTTTTGCTAATAGAAATCCTCTTAAACTGTGTGAACGTACGAATTGTAGTGTGAAAGAAGGGATAGTGCAGAGAATAGAACCGTGGATTCGAAGGGAGCTGCTAGCCATTCTAGGGGGCATGGATCCATCAGTTATTATTTGTGTGGCAACAAGTTTGTTTATTACGCACCTTGAAGCACTGAGTCGTACGCCTTCTTCCAGTTCCGGACAGATTGATGTGGAAGATGACTTTCTGGCACCTTTGAGACCTTTCCTCCATGATCGAACTGATATCTTCTGGCATGAACTGAGGTGTTTTGCAGAGAGTTCATTTTCCATGGAGACATATGATCAAGTAGTAGAATATCGAACTGTTGGATACACAGAGTAG 903 46.95 MESSSSSSSSFKKSRPNLSRESFLSRVIRPEIEGKSCPICLGIIEGRRAVVLASCMHAYCEECIRKWSSLKRRCPLCNAQFDSWFSKICFFSRSFSKVRLPALDSGKTIHLGAGSSPMSVRRLGQVTRARVDNYSSREKPVPWRRSFGRPGSVSADVIAQRKLQWRASIYHGSLQAVRFANRNPLKLCERTNCSVKEGIVQRIEPWIRRELLAILGGMDPSVIICVATSLFITHLEALSRTPSSSSGQIDVEDDFLAPLRPFLHDRTDIFWHELRCFAESSFSMETYDQVVEYRTVGYTE 300
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 699131 700442 - Conep07aG0016900.1 Cone7ag0167 440763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag0167 300 ProSitePatterns Zinc finger RING-type signature. 55 64 IPR017907 -
Cone7ag0167 300 PANTHER E3 UBIQUITIN-PROTEIN LIGASE TOPORS 6 295 - GO:0000209(PANTHER)|GO:0006513(PANTHER)|GO:0061630(PANTHER)
Cone7ag0167 300 Pfam Ring finger domain 36 78 IPR001841 -
Cone7ag0167 300 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 31 145 IPR013083 -
Cone7ag0167 300 SMART ring_2 37 77 IPR001841 -
Cone7ag0167 300 ProSiteProfiles Zinc finger RING-type profile. 37 78 IPR001841 -
Cone7ag0167 300 SUPERFAMILY RING/U-box 31 84 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag0163 Cone-Chr4:768341 Cone7ag0167 Cone-Chr7:699131 5.68E-118 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag0167 - - - 0.0