Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag0170 ATGGGTGGCTGCTTTCCTTGTTTCGGATCATCAAACGAAGAGAGTAACAATGGCGTGAAGGAAGTTACGAAGAAGGATTCAGATAAAGAAGCCTCTGCTGTTCAGTCTCACCATGTGAGCAGATGTAGCTCAGACAAATCGAAATCGAGGAGTGGTTCTGAGGTAAAGAAGGAATTAACAGTTGCAAAAGACGGAACAACGACACATATTGCAGCACAGACATTTACATTCCGAGAGCTTGCAGCTGCCACAAAGAATTTCAAGCCAGAATGCTTATTAGGTGGGGGAGGTTTTGGCCGTGTATATAAAGGTCACCTAGAGAGCACTGGCCAGGTAGTGGCTGTGAAACAGCTTGATCGAAATGGGCTTCAAGGAAACCGGGAATTTCTGGTTGAGGTGCTAATGCTTAGCCTCTTACACCACCAAAATCTCGTAAACTTGATTGGTTATTGTGCAGATGGAGACCAACGCCTACTCGTTTATGAGTTGATGCCATTGGGTTCATTAGAAGATCATTTACATGACCTTGCACCAGATAAGGAGCCCTTGGATTGGAATATGCGAATGAAGATTGCAGCAGGTGCTGCCAAGGGGTTGGAATATTTACACGACAAAGCGAATCCTCCTGTTATATACAGAGATTTAAAGTCCTCTAACATTCTGCTAGATGAAGGCTATCACCCTAAGCTATCGGACTTCGGCCTTGCAAAACTGGGACCTGTTGGTGACAAGACTCATGTCTCTACCCGTGTCATGGGAACATATGGTTATTGTGCTCCAGAGTATGCTATGACCGGTCAACTCACCCTAAAATCAGATGTTTATAGTTTTGGAGTTGTCTTTCTAGAACTTATCACAGGGCGGAAGGCTATCGATAATAACCGTGCCCCTTCAGAACATAATCTTGTAGCATGGGCACGGCCACTTTTTAAGGATCGTAGGAAGTTTCCAAAAATGGTGGATCCACTATTACAAGGATGGTATCCGATTAGGGGACTTTATCAGGCGCTTGCAGTTGCAGCAATGTGTTTACAAGAACAAGCGGCTACTAGACCTCTAATAGGGGATGTAGTTACGGCTCTTACATATCTAGCTTCCCAAACTTATGACCCGAATTCTGTTGCTTCTCGAAGCAATAGAATTGGTGTATCTACTCCTGGGAGCAGTGATGAGCGGAAAGGTGCGTTAGACGGGCTCGATAGCCCTGATGATCATAGGAGAATGGGCCGACATGGTTCGTCTTCGGCCCAAAAAAAATCGCCAGATTTTAGAAAAAGATGTCTTGTTCGGGAGCTGAGTTGTAATGTGGAGTCGAGTAAAACAGATAGTGGAGGAGGCTCTGCTAGAAAATGGGGTTTGGATGAGTTGGAGATGGAGGAGTATCAACATGGTAGTCCTGTAAATAGTGCGAGAGCGAGGGGGGATATGGCAAGGGCTCGAGATCTCGACAGAGAGCGAGCAGTGGCAGAGGCTAGAGTATGGGGTGAGAATTGGAGGGAAAGGAAAAGGACAAATGCATTGGGTAGTTCTTTATAG 1536 45.57 MGGCFPCFGSSNEESNNGVKEVTKKDSDKEASAVQSHHVSRCSSDKSKSRSGSEVKKELTVAKDGTTTHIAAQTFTFRELAAATKNFKPECLLGGGGFGRVYKGHLESTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHQNLVNLIGYCADGDQRLLVYELMPLGSLEDHLHDLAPDKEPLDWNMRMKIAAGAAKGLEYLHDKANPPVIYRDLKSSNILLDEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVFLELITGRKAIDNNRAPSEHNLVAWARPLFKDRRKFPKMVDPLLQGWYPIRGLYQALAVAAMCLQEQAATRPLIGDVVTALTYLASQTYDPNSVASRSNRIGVSTPGSSDERKGALDGLDSPDDHRRMGRHGSSSAQKKSPDFRKRCLVRELSCNVESSKTDSGGGSARKWGLDELEMEEYQHGSPVNSARARGDMARARDLDRERAVAEARVWGENWRERKRTNALGSSL 511
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 711534 714540 + Conep07aG0017200.1 Cone7ag0170 440766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag0170 511 MobiDBLite consensus disorder prediction 18 58 - -
Cone7ag0170 511 MobiDBLite consensus disorder prediction 372 423 - -
Cone7ag0170 511 MobiDBLite consensus disorder prediction 393 423 - -
Cone7ag0170 511 MobiDBLite consensus disorder prediction 462 483 - -
Cone7ag0170 511 Gene3D Transferase(Phosphotransferase) domain 1 164 381 - -
Cone7ag0170 511 SMART serkin_6 87 364 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag0170 511 MobiDBLite consensus disorder prediction 372 386 - -
Cone7ag0170 511 MobiDBLite consensus disorder prediction 1 58 - -
Cone7ag0170 511 Pfam Protein kinase domain 92 301 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag0170 511 CDD STKc_IRAK 93 362 - -
Cone7ag0170 511 ProSitePatterns Serine/Threonine protein kinases active-site signature. 210 222 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone7ag0170 511 FunFam Serine/threonine-protein kinase PBS1 164 379 - -
Cone7ag0170 511 SUPERFAMILY Protein kinase-like (PK-like) 73 374 IPR011009 -
Cone7ag0170 511 ProSitePatterns Protein kinases ATP-binding region signature. 93 116 IPR017441 GO:0005524(InterPro)
Cone7ag0170 511 FunFam Serine/threonine-protein kinase PBS1 60 163 - -
Cone7ag0170 511 ProSiteProfiles Protein kinase domain profile. 87 364 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag0170 511 PANTHER OS07G0668900 PROTEIN 37 377 - -
Cone7ag0170 511 Gene3D Phosphorylase Kinase; domain 1 57 163 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag1133 Cone-Chr14:9414814 Cone7ag0170 Cone-Chr7:711534 1.83E-163 dispersed
Cone15ag1154 Cone-Chr15:9341508 Cone7ag0170 Cone-Chr7:711534 3.65E-168 dispersed
Cone1ag1332 Cone-Chr1:56450553 Cone7ag0170 Cone-Chr7:711534 1.03E-192 dispersed
Cone1ag1672 Cone-Chr1:57876757 Cone7ag0170 Cone-Chr7:711534 1.81E-127 dispersed
Cone3ag0298 Cone-Chr3:1540435 Cone7ag0170 Cone-Chr7:711534 1.14E-184 dispersed
Cone3ag0660 Cone-Chr3:3318836 Cone7ag0170 Cone-Chr7:711534 4.52E-124 dispersed
Cone5ag0318 Cone-Chr5:1348653 Cone7ag0170 Cone-Chr7:711534 8.30E-187 dispersed
Cone5ag0916 Cone-Chr5:3920853 Cone7ag0170 Cone-Chr7:711534 7.55E-129 dispersed
Cone5ag1197 Cone-Chr5:5414199 Cone7ag0170 Cone-Chr7:711534 4.34E-156 dispersed
Cone7ag0170 Cone-Chr7:711534 Cone7ag0532 Cone-Chr7:2475645 5.60E-110 dispersed
Cone8ag0647 Cone-Chr8:6434382 Cone7ag0170 Cone-Chr7:711534 2.57E-77 transposed
Cone14ag0778 Cone-Chr14:4523716 Cone7ag0170 Cone-Chr7:711534 2.79E-282 wgd
Cone4ag0167 Cone-Chr4:783755 Cone7ag0170 Cone-Chr7:711534 2.21E-252 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82992 PF04570 zf-FLZ 6.70E-16 CL0175 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag0170 - - - 0.0