Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag0178 ATGGGGTGTGTGTTTGGGAAGGAGGTCGCGGCGAAGTCTGTGGAGAAGGCAGGGGAGAGAGAGGGGAGGAGGAAGAAGGAGGACAAGGAGGAGGAGGAGGACGTGGTGGTGGTTAGGGCTTCTGCGAAAGGGGAGATCGGTGAAGCTCAGAATGGTGGGAGTCGGAACGAGGCTGAGGAGCAGGAGAAGAGCACAAGCACGAGACCGAGAGGTGAACGGAAGCGATCGTCAAAGCCGAATCCGAGGCTGAGTAATCCGCCGAAGAATGTGCATGGCGAACAAGTGGCGGCTGGGTGGCCATCTTGGCTCTCTGCTGTCGCCGGAGAAGCCATTAACGGATGGACACCTCGGCGAGCTGATACTTTTGAGAAGCTTGACAAAATTGGGCAAGGTACATACAGTAATGTGTACAAAGCCAGGGACTCATTGACAGGGAAAATTGTTGCACTAAAGAAGGTTCGTTTTGACAATTTGGAGCCTGAGAGTGTAAGGTTCATGGCAAGAGAGATTCTCATTCTACGGCGTTTAGATCATCCCAATGTTGTGAAATTGGAAGGTTTAGTAACGTCCAGGATGTCTTGTAGTTTGTATCTTGTATTTGAATATATGGAGCATGATTTGGCTGGACTTGCAGCAAGCCCAGTAATAAAGTTCACAGAGTCTCAGGTTAAATGTTATTTGCATCAACTATTATCGGGGCTTGAACACTGTCATAATCGCCATGTGCTTCATCGGGATATAAAGGGCTCGAATCTACTTATTGACAATGGTGGGGTCCTTAAGATTGCTGATTTCGGATTGGCTTCTGTCTTCGATCCGAATCACAAGCATCCCATGACTAGCAGGGTGGTTACTTTATGGTATCGACCCCCAGAACTACTTTTTGGTGCTACTGATTATGGCGTTGGTGTAGACCTTTGGAGTGCTGGTTGCATTTTGGCTGAGTTGTTGGCTGGAAAGCCTATCATGCCTGGTCGCACTGAGGTGGAACAGCTACATAAGATCTTCAAGTTATGTGGTTCTCCTTCTGAAGAATACTGGAAAAAGTCAAAGTTGCCGCATGCAACTATATTCAAGCCTCAACAATCATATAAGCGATGCATATCAGAAACATTTATAGATTTTCCACCTTCGTCGCTTCCACTGATTGAGAGACTTCTTGCAATCGACCCAGCTGGACGCCAAACTGCCACTGATGCATTGAGCAGTGAATTCTTCACAACTAAGCCTTATGCTTGTGAGCCCTCTAGCCTTCCAAAGTACCCTCCAAGCAAGGAGATGGATGCTAAGCTACGTGATGAAGAAGCTAGAAGGCTGAGAGCTGCCGGAAGAGCTAATGCAGATGGTGGGAAGAAAATACGCTCACGCGATAGAGCTGCTAGGGCAATTCCTGCACACGATGCCAATGCTGAGCTTCAAGCCAATCTTGATAGGCGGCGACTAATATCACATGCAAACGCAAAGAGCAAGAGTGAAAAGTTTCCTCCACCACACCAAGATGGAACGCTTGGCTATCCTCTGGCCTCTTCGCATCACATTAATCCAATGTACGATCCCCCTGATGTTCCTTTCAGCTCCACCAATTTGTCCTATTCAAAAGCTCCCATCCAGACTTGGTCTGGCCCTTTGGTCGACCCAGCTGCCGTGGGCCCACCAAGATGGAAAAAACATGGAGCAGGTGAGGGGAAGGGTCACTCAAAACCATCAAAAAGCTCTGCAAGAGTCTGA 1728 48.32 MGCVFGKEVAAKSVEKAGEREGRRKKEDKEEEEDVVVVRASAKGEIGEAQNGGSRNEAEEQEKSTSTRPRGERKRSSKPNPRLSNPPKNVHGEQVAAGWPSWLSAVAGEAINGWTPRRADTFEKLDKIGQGTYSNVYKARDSLTGKIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFEYMEHDLAGLAASPVIKFTESQVKCYLHQLLSGLEHCHNRHVLHRDIKGSNLLIDNGGVLKIADFGLASVFDPNHKHPMTSRVVTLWYRPPELLFGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQSYKRCISETFIDFPPSSLPLIERLLAIDPAGRQTATDALSSEFFTTKPYACEPSSLPKYPPSKEMDAKLRDEEARRLRAAGRANADGGKKIRSRDRAARAIPAHDANAELQANLDRRRLISHANAKSKSEKFPPPHQDGTLGYPLASSHHINPMYDPPDVPFSSTNLSYSKAPIQTWSGPLVDPAAVGPPRWKKHGAGEGKGHSKPSKSSARV 575
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 747060 750347 + Conep07aG0018000.1 Cone7ag0178 440774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag0178 575 MobiDBLite consensus disorder prediction 442 466 - -
Cone7ag0178 575 MobiDBLite consensus disorder prediction 12 39 - -
Cone7ag0178 575 CDD STKc_CDK9_like 122 406 - -
Cone7ag0178 575 FunFam probable serine/threonine-protein kinase At1g54610 109 204 - -
Cone7ag0178 575 ProSiteProfiles Protein kinase domain profile. 122 406 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag0178 575 MobiDBLite consensus disorder prediction 442 464 - -
Cone7ag0178 575 MobiDBLite consensus disorder prediction 486 519 - -
Cone7ag0178 575 MobiDBLite consensus disorder prediction 536 575 - -
Cone7ag0178 575 Gene3D Phosphorylase Kinase; domain 1 109 204 - -
Cone7ag0178 575 MobiDBLite consensus disorder prediction 1 93 - -
Cone7ag0178 575 SUPERFAMILY Protein kinase-like (PK-like) 115 411 IPR011009 -
Cone7ag0178 575 Gene3D Transferase(Phosphotransferase) domain 1 205 445 - -
Cone7ag0178 575 ProSitePatterns Protein kinases ATP-binding region signature. 128 151 IPR017441 GO:0005524(InterPro)
Cone7ag0178 575 FunFam probable serine/threonine-protein kinase At1g54610 205 446 - -
Cone7ag0178 575 Pfam Protein kinase domain 122 406 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag0178 575 MobiDBLite consensus disorder prediction 55 79 - -
Cone7ag0178 575 ProSitePatterns Serine/Threonine protein kinases active-site signature. 242 254 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone7ag0178 575 SMART serkin_6 122 406 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag0178 575 PANTHER CELL DIVISION PROTEIN KINASE 121 406 IPR050108 GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag1474 Cone-Chr4:11592676 Cone7ag0178 Cone-Chr7:747060 3.26E-142 dispersed
Cone5ag0524 Cone-Chr5:2209239 Cone7ag0178 Cone-Chr7:747060 2.61E-278 dispersed
Cone6ag0146 Cone-Chr6:740829 Cone7ag0178 Cone-Chr7:747060 3.18E-211 dispersed
Cone7ag0178 Cone-Chr7:747060 Cone9ag0171 Cone-Chr9:760275 2.86E-213 dispersed
Cone4ag0174 Cone-Chr4:812123 Cone7ag0178 Cone-Chr7:747060 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82993 PF09320 DUF1977 4.40E-09 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag0178 K08819 - vvi:100240938 923.694