Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone7ag0181 | ATGGAAGCGGCCACTTCTGCGATGATGAATTTGGGGACGGCGTTGGGCTCGGATCACGCCTCGGTGGTTTCTATGAATCTATTCGTGGCGCTGCTTTGCGCCTGCATCGTTATCGGCCACTTGTTGGAAGAGAATCGATGGATGAATGAGTCAATTACTGCACTGTCGATTGGATTGTGCACAGGGGTGATTATATTGTTTACTACAGGAGGAAAAAGCTCAAGGTTGTTGGTTTTTAGTGAAGATCTTTTCTTCATTTATCTTCTTCCCCCTATTATTTTCAATGCCGGGTTCCAGGTGAAGAAGAAGCAATTTTTTCATAATTTTATGACTATAATGTTGTTTGGTGCATTTGGCACACTCATATCTTTCGGAATTATATCGCAAGGCGCTAGACACTTCTTCCAGAAAATGAATATCGGTTATCTCGAGTTTGGAGATTACCTAGCAATTGGCGCAATATTTTCTGCTACAGATTCTGTTTGCACCCTACAGGTGCTTAATCAAGAAGAGACACCTTTGCTATACAGCCTTGTTTTTGGGGAAGGAGTAGTTAACGATGCAACAGCACTGGTCCTATTCCATGCTATCCAGAAATTTGACTTATCTCACATTGATTCAAGCATTGCTTTGCAGTTTGTTAATAACTTATTGTCTCTCTTTATAGCAAGTACGGCTCTTGGAGTGGTAGCTGGTCTATTCAGTGCATTCGTGATTAAGAAGCTGGGCAGACATTGTACGGATCGTGAGGTTGCTCTGACGATACTCATGGCATACCTTTCTTATATGCTTGCTGAGCTCTTTCAATTTAGTGCAATTCTCACTGTCTTCTTTTGTGGGATTCTTATGTCTCACTATACATGGCATAATGTGACAGAGAGTTCAAGAGTGACAACTAAGCATGCTTTTGCTACTCTTTCCTTTGTGTCTGAGATATTTATTTTCCTTTATGTTGGAATGGATGCCTTGGACATTGAGAAATGGAGAGTTGTGAGCCATAGTCCTGGGAAATCAATTGGCGTTAGTTCAGTACTGATCGGACTTGTTCTTGTTGGAAGAGCAGCATTTGTTTTCCCTCTATCATTCTTGTCCAACTTGACCAAAAAATCTCCTCATGAAAAACTCACTTTAAAGCAACAAGTCACAATTTGGTGGGCCGGTCTTATGCGTGGGGCCGTTTCTATGGCACTTGCATATAATCAGTTTACCCGATTAGGCCATACACAACTTCGTGGAAATGCAATGCTGATTACAAGTACAATCACAGTAGTTCTTTTCAGCACAGTAGTGTTTGGGCTGATGACAAAACCTCTAGTGAGGATCTTACTTCCTCCATCAAAATTCATAGTGGGAATGTATTCCTCCGAACCATCTTCTCCCAAGTCCTTTACTACGCCACTTCTCATTGACTGCCAAAATTCAGAGGCTGAGGAGGATGACAGCGAAAATAGTCCACACCCCACCGGATTACTACGGATGCTTCTGAGTATCCGGGTTCACTCAGTTCACCATTATTGGCGTGGATTCGATAATACTTTCATGCGACCGGTTTTTGGCGGTAGAGGTTTTGTTCCTTTCATTCCTGGATCACCCACTGAAGGTCTTCCAGATTGGCAGTGA | 1620 | 42.53 | MEAATSAMMNLGTALGSDHASVVSMNLFVALLCACIVIGHLLEENRWMNESITALSIGLCTGVIILFTTGGKSSRLLVFSEDLFFIYLLPPIIFNAGFQVKKKQFFHNFMTIMLFGAFGTLISFGIISQGARHFFQKMNIGYLEFGDYLAIGAIFSATDSVCTLQVLNQEETPLLYSLVFGEGVVNDATALVLFHAIQKFDLSHIDSSIALQFVNNLLSLFIASTALGVVAGLFSAFVIKKLGRHCTDREVALTILMAYLSYMLAELFQFSAILTVFFCGILMSHYTWHNVTESSRVTTKHAFATLSFVSEIFIFLYVGMDALDIEKWRVVSHSPGKSIGVSSVLIGLVLVGRAAFVFPLSFLSNLTKKSPHEKLTLKQQVTIWWAGLMRGAVSMALAYNQFTRLGHTQLRGNAMLITSTITVVLFSTVVFGLMTKPLVRILLPPSKFIVGMYSSEPSSPKSFTTPLLIDCQNSEAEEDDSENSPHPTGLLRMLLSIRVHSVHHYWRGFDNTFMRPVFGGRGFVPFIPGSPTEGLPDWQ | 539 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 761678 | 764862 | + | Conep07aG0018500.1 | Cone7ag0181 | 440777 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone7ag0181 | 539 | Gene3D | - | 145 | 195 | - | - | |
| Cone7ag0181 | 539 | PRINTS | Na+/H+ exchanger signature | 97 | 111 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Cone7ag0181 | 539 | PRINTS | Na+/H+ exchanger signature | 83 | 94 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Cone7ag0181 | 539 | PRINTS | Na+/H+ exchanger signature | 152 | 162 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Cone7ag0181 | 539 | PRINTS | Na+/H+ exchanger signature | 112 | 120 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Cone7ag0181 | 539 | Pfam | Sodium/hydrogen exchanger family | 31 | 440 | IPR006153 | GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro) | |
| Cone7ag0181 | 539 | PANTHER | SODIUM/HYDROGEN EXCHANGER | 17 | 527 | IPR018422 | GO:0005886(PANTHER)|GO:0006812(InterPro)|GO:0015385(PANTHER)|GO:0015385(InterPro)|GO:0015386(PANTHER)|GO:0016020(InterPro)|GO:0051453(PANTHER)|GO:0071805(PANTHER)|GO:0098719(PANTHER)|GO:1902600(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone10ag0726 | Cone-Chr10:3683927 | Cone7ag0181 | Cone-Chr7:761678 | 4.33E-207 | dispersed | |
| Cone1ag1776 | Cone-Chr1:58371527 | Cone7ag0181 | Cone-Chr7:761678 | 3.10E-277 | dispersed | |
| Cone20ag0909 | Cone-Chr20:6560461 | Cone7ag0181 | Cone-Chr7:761678 | 3.27E-218 | dispersed | |
| Cone5ag0001 | Cone-Chr5:14717 | Cone7ag0181 | Cone-Chr7:761678 | 5.92E-203 | dispersed | |
| Cone6ag0037 | Cone-Chr6:225996 | Cone7ag0181 | Cone-Chr7:761678 | 6.42E-47 | dispersed | |
| Cone7ag0181 | Cone-Chr7:761678 | Cone9ag0040 | Cone-Chr9:173759 | 2.00E-199 | dispersed | |
| Cone17ag0478 | Cone-Chr17:2302988 | Cone7ag0181 | Cone-Chr7:761678 | 3.23E-99 | wgd | |
| Cone4ag0176 | Cone-Chr4:826177 | Cone7ag0181 | Cone-Chr7:761678 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone7ag0181 | - | - | - | 0.0 |