Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag0184 ATGATCAGCAGTTTGAAGGCGATCTTCTTGGTCTCATCTGTACTTGTTGCAGTACTTAGCAATGGGGAACAGTTGACCAAAGATTTTTACAAGGAAATCTGTCCGAATGTGGAGCAAATTGTTCGAGAAATTATCTGGAAAAACGTTGAGAAGAATTATACTTTGCCTGCGAAGTTCCTGAGGATGCATTATCATGATTGTTTTGTTAGGGGTTGCGATGGCTCTGTATTACTGGACTCAACGGCGAACGCCGTGACAGAAAAGACGGCGCTTCCTAACCTATCACTAGGAGGATACGATGTTATAGAAGAAGTTAAGATCCAGCTCGAGCAAACATGCCCTGGAATTGTTTCTTGTGCAGACATTCTAGCTTTGGCTGCTAGAGACTCTGTCTCCTATCAGTTTAAGAACCCAATTTGGGAAGTGTTAACTGGAAGAAGAGATGGAACAGTCTCTATTGCTTCTGAAGCTCTTTCCGACATTCCCTCTCCATTCTTAAACTTCAGACAACTCAAACAATCTTTCGCTAGGAAACTGGGGACAGAAGACCCTTCTCTTGACTCGAACTACATGTCGTACTTGAAATCACAATGCAAGAGCCTCTCCGACACCACGACGACGGTGGCAATGGACCCGGGTTCGTCCCTGTCGTTTGACGTCAACTACTTCAGGCTGTTGAAGATGCGTCACGGTCTTTTCCAATCTGATTCTGCTCTTTTGACCGACGGTCAGTCCAGCAGCGTGGTTGATGAACTGGTCAACGCCAGGAGTTTCTTCAAAGAGTTTAGCCAATCAGTGGTCAAGATGGGGTCGGTCGGAGTTCTCACCGGCAGTTCGGGAGAGATAAGGAACAAGTGTAACGTGCCCAATTGA 873 45.93 MISSLKAIFLVSSVLVAVLSNGEQLTKDFYKEICPNVEQIVREIIWKNVEKNYTLPAKFLRMHYHDCFVRGCDGSVLLDSTANAVTEKTALPNLSLGGYDVIEEVKIQLEQTCPGIVSCADILALAARDSVSYQFKNPIWEVLTGRRDGTVSIASEALSDIPSPFLNFRQLKQSFARKLGTEDPSLDSNYMSYLKSQCKSLSDTTTTVAMDPGSSLSFDVNYFRLLKMRHGLFQSDSALLTDGQSSSVVDELVNARSFFKEFSQSVVKMGSVGVLTGSSGEIRNKCNVPN 290
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 777112 778290 + Conep07aG0018900.1 Cone7ag0184 440780

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag0184 290 PANTHER PEROXIDASE 25-RELATED 182 286 IPR000823 GO:0004601(PANTHER)|GO:0004601(InterPro)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Cone7ag0184 290 Gene3D Peroxidase, domain 2 162 178 - -
Cone7ag0184 290 CDD secretory_peroxidase 24 288 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cone7ag0184 290 FunFam Peroxidase 28 167 - -
Cone7ag0184 290 Gene3D Peroxidase, domain 2 182 269 - -
Cone7ag0184 290 SUPERFAMILY Heme-dependent peroxidases 24 290 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone7ag0184 290 Gene3D - 270 290 - -
Cone7ag0184 290 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone7ag0184 290 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone7ag0184 290 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone7ag0184 290 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone7ag0184 290 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone7ag0184 290 Gene3D - 28 161 - -
Cone7ag0184 290 Pfam Peroxidase 182 253 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone7ag0184 290 Pfam Peroxidase 41 178 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone7ag0184 290 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone7ag0184 290 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone7ag0184 290 PRINTS Haem peroxidase superfamily signature 211 226 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone7ag0184 290 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone7ag0184 290 ProSiteProfiles Plant heme peroxidase family profile. 24 290 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag0184 K00430 - - rcu:8262367 362.073
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone7ag0184 Cone-Chr7:777112 Cone8ag1449 Cone-Chr8:11205720 2.14E-84 dispersed
Cone14ag0796 Cone-Chr14:4694281 Cone7ag0184 Cone-Chr7:777112 3.29E-86 wgd
Cone15ag0797 Cone-Chr15:4884337 Cone7ag0184 Cone-Chr7:777112 1.16E-86 wgd
Cone4ag0180 Cone-Chr4:842610 Cone7ag0184 Cone-Chr7:777112 4.17E-62 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g379 . . . . . . . . Cmo08g01170 . . . . . . . . . . . . . . . Cla06g00516 . . . . . . . . Cone7ag0184 . . . Chy11g01459 . . . . . . . . . . . . Cma08g01197 . Car08g01073 . . . . . . . . . . . . . . . . . Lsi09g01386 . . Cme11g01964