Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag0215 ATGGGTGTTTCTTCAAGCAACAGAAGACGGCACAACAATCCACCACCTCGCGGCCACTACCTCTCCTCCTCTTACTATTACCCCTCCGAACCCTCTTCTCTACCTCCGCCGCCTCTTCCTCCCCCTCCTCCTCCCCATAACCACCACTACGCTACTCCCAATCCAACTATGATCTCCCCAACGTCAACCGCTGCCGCCGGCTATCCTCCACCGCACCATAACCCTTATCCTGCACCCCCTCCTCCTCTGCCGCCGCCTAACTCCTACTACTATTCCGGCGGGTACAATTCCTGCAATTACGCCAGCTCTACAATCGGTCGGTTCAATTACCACCCTTACTACGCCAATCAGAGTAGTAGTAATGGGCGGTCTGCAATTCGGCCCCATGTGGCGGGTCCCACATTGCCGCCACCTGCGCCTGTGCCTTACGTTGACCACCAGCAAGCGAAGAAGGTAAAAAATGATGTGAATGTGCATAAAGATACTCTGCGTCTTGAGGTAGATGAGCAAAATCCCGATCATCACTTGGTTTCTTTCGTTTTTGATGCCTTATTTGATGGCAGCATTACAATCTTCTACTTTGCCAAGGAAGAATTAAACTGTAGATTTGTTCCGAATTTCCCAGAAGCATTCACCCCAGTAAAAGTCCCATTTCGGAAAGGTCCAGGCCAGAAATTTCTCCAGCCTTCAGGGACAGGCATCGACTTAGGATTCTTCGATTTGGACGATCTCGCAAAACCATCGCCTGGAGAAGAGGTCTTCCCTCTTGTCATATCAGCTGAGACAACCTTTCCATCCCAGTCTTTGGATGATGGTGGAGATAGTGGGGCCAAGCCTCCTCTACCTGATACTACTTCTCATATACAGATCACTCAAGCTGTCCTAGAAAAACAAAATGGCAGCCCATTCCAAGTTCGGGTAGTTAGGCAGTTACTATGGATCGATAAGGTCCGCTATGAACTCCGTGAGATATTCGGATTAGCTACCTCTTCGGAAATGGGTTTTGACGATAATGACCCTGGAAAGGAGTGTGTAATTTGCATGACCGAACCTAAGGATACTGCTGTCATTCCTTGCCGACATATGTGCATGTGCAGTGGTTGTGCCAAGGAACTGAGACGTCAAACAAATAAGTGCCCGATATGTCGTCAACCCATTGAAGAACTTATAGAGATCAAGATAAATAATGGTGATCAGTGA 1200 48.75 MGVSSSNRRRHNNPPPRGHYLSSSYYYPSEPSSLPPPPLPPPPPPHNHHYATPNPTMISPTSTAAAGYPPPHHNPYPAPPPPLPPPNSYYYSGGYNSCNYASSTIGRFNYHPYYANQSSSNGRSAIRPHVAGPTLPPPAPVPYVDHQQAKKVKNDVNVHKDTLRLEVDEQNPDHHLVSFVFDALFDGSITIFYFAKEELNCRFVPNFPEAFTPVKVPFRKGPGQKFLQPSGTGIDLGFFDLDDLAKPSPGEEVFPLVISAETTFPSQSLDDGGDSGAKPPLPDTTSHIQITQAVLEKQNGSPFQVRVVRQLLWIDKVRYELREIFGLATSSEMGFDDNDPGKECVICMTEPKDTAVIPCRHMCMCSGCAKELRRQTNKCPICRQPIEELIEIKINNGDQ 399
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 920899 923089 + Conep07aG0022000.1 Cone7ag0215 440811
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag0215 399 FunFam probable E3 ubiquitin-protein ligase LOG2 328 393 - -
Cone7ag0215 399 MobiDBLite consensus disorder prediction 1 81 - -
Cone7ag0215 399 Pfam Zinc finger, C3HC4 type (RING finger) 342 388 - -
Cone7ag0215 399 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 328 393 IPR013083 -
Cone7ag0215 399 CDD mRING-HC-C3HC5_MGRN1-like 342 383 IPR045195 -
Cone7ag0215 399 SUPERFAMILY RING/U-box 325 389 - -
Cone7ag0215 399 SMART ring_2 344 382 IPR001841 -
Cone7ag0215 399 ProSiteProfiles Zinc finger RING-type profile. 344 383 IPR001841 -
Cone7ag0215 399 PANTHER MAHOGUNIN 57 396 IPR045194 GO:0016567(PANTHER)|GO:0061630(InterPro)|GO:0061630(PANTHER)
Cone7ag0215 399 MobiDBLite consensus disorder prediction 30 50 - -
Cone7ag0215 399 MobiDBLite consensus disorder prediction 265 284 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag1269 Cone-Chr13:9587451 Cone7ag0215 Cone-Chr7:920899 4.64E-89 dispersed
Cone19ag1257 Cone-Chr19:8616095 Cone7ag0215 Cone-Chr7:920899 2.96E-91 dispersed
Cone4ag0207 Cone-Chr4:952688 Cone7ag0215 Cone-Chr7:920899 7.91E-210 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag0215 K27504 - csv:101203938 454.136