Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone7ag0215 | ATGGGTGTTTCTTCAAGCAACAGAAGACGGCACAACAATCCACCACCTCGCGGCCACTACCTCTCCTCCTCTTACTATTACCCCTCCGAACCCTCTTCTCTACCTCCGCCGCCTCTTCCTCCCCCTCCTCCTCCCCATAACCACCACTACGCTACTCCCAATCCAACTATGATCTCCCCAACGTCAACCGCTGCCGCCGGCTATCCTCCACCGCACCATAACCCTTATCCTGCACCCCCTCCTCCTCTGCCGCCGCCTAACTCCTACTACTATTCCGGCGGGTACAATTCCTGCAATTACGCCAGCTCTACAATCGGTCGGTTCAATTACCACCCTTACTACGCCAATCAGAGTAGTAGTAATGGGCGGTCTGCAATTCGGCCCCATGTGGCGGGTCCCACATTGCCGCCACCTGCGCCTGTGCCTTACGTTGACCACCAGCAAGCGAAGAAGGTAAAAAATGATGTGAATGTGCATAAAGATACTCTGCGTCTTGAGGTAGATGAGCAAAATCCCGATCATCACTTGGTTTCTTTCGTTTTTGATGCCTTATTTGATGGCAGCATTACAATCTTCTACTTTGCCAAGGAAGAATTAAACTGTAGATTTGTTCCGAATTTCCCAGAAGCATTCACCCCAGTAAAAGTCCCATTTCGGAAAGGTCCAGGCCAGAAATTTCTCCAGCCTTCAGGGACAGGCATCGACTTAGGATTCTTCGATTTGGACGATCTCGCAAAACCATCGCCTGGAGAAGAGGTCTTCCCTCTTGTCATATCAGCTGAGACAACCTTTCCATCCCAGTCTTTGGATGATGGTGGAGATAGTGGGGCCAAGCCTCCTCTACCTGATACTACTTCTCATATACAGATCACTCAAGCTGTCCTAGAAAAACAAAATGGCAGCCCATTCCAAGTTCGGGTAGTTAGGCAGTTACTATGGATCGATAAGGTCCGCTATGAACTCCGTGAGATATTCGGATTAGCTACCTCTTCGGAAATGGGTTTTGACGATAATGACCCTGGAAAGGAGTGTGTAATTTGCATGACCGAACCTAAGGATACTGCTGTCATTCCTTGCCGACATATGTGCATGTGCAGTGGTTGTGCCAAGGAACTGAGACGTCAAACAAATAAGTGCCCGATATGTCGTCAACCCATTGAAGAACTTATAGAGATCAAGATAAATAATGGTGATCAGTGA | 1200 | 48.75 | MGVSSSNRRRHNNPPPRGHYLSSSYYYPSEPSSLPPPPLPPPPPPHNHHYATPNPTMISPTSTAAAGYPPPHHNPYPAPPPPLPPPNSYYYSGGYNSCNYASSTIGRFNYHPYYANQSSSNGRSAIRPHVAGPTLPPPAPVPYVDHQQAKKVKNDVNVHKDTLRLEVDEQNPDHHLVSFVFDALFDGSITIFYFAKEELNCRFVPNFPEAFTPVKVPFRKGPGQKFLQPSGTGIDLGFFDLDDLAKPSPGEEVFPLVISAETTFPSQSLDDGGDSGAKPPLPDTTSHIQITQAVLEKQNGSPFQVRVVRQLLWIDKVRYELREIFGLATSSEMGFDDNDPGKECVICMTEPKDTAVIPCRHMCMCSGCAKELRRQTNKCPICRQPIEELIEIKINNGDQ | 399 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 920899 | 923089 | + | Conep07aG0022000.1 | Cone7ag0215 | 440811 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone7ag0215 | 399 | FunFam | probable E3 ubiquitin-protein ligase LOG2 | 328 | 393 | - | - | |
Cone7ag0215 | 399 | MobiDBLite | consensus disorder prediction | 1 | 81 | - | - | |
Cone7ag0215 | 399 | Pfam | Zinc finger, C3HC4 type (RING finger) | 342 | 388 | - | - | |
Cone7ag0215 | 399 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 328 | 393 | IPR013083 | - | |
Cone7ag0215 | 399 | CDD | mRING-HC-C3HC5_MGRN1-like | 342 | 383 | IPR045195 | - | |
Cone7ag0215 | 399 | SUPERFAMILY | RING/U-box | 325 | 389 | - | - | |
Cone7ag0215 | 399 | SMART | ring_2 | 344 | 382 | IPR001841 | - | |
Cone7ag0215 | 399 | ProSiteProfiles | Zinc finger RING-type profile. | 344 | 383 | IPR001841 | - | |
Cone7ag0215 | 399 | PANTHER | MAHOGUNIN | 57 | 396 | IPR045194 | GO:0016567(PANTHER)|GO:0061630(InterPro)|GO:0061630(PANTHER) | |
Cone7ag0215 | 399 | MobiDBLite | consensus disorder prediction | 30 | 50 | - | - | |
Cone7ag0215 | 399 | MobiDBLite | consensus disorder prediction | 265 | 284 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone13ag1269 | Cone-Chr13:9587451 | Cone7ag0215 | Cone-Chr7:920899 | 4.64E-89 | dispersed | |
Cone19ag1257 | Cone-Chr19:8616095 | Cone7ag0215 | Cone-Chr7:920899 | 2.96E-91 | dispersed | |
Cone4ag0207 | Cone-Chr4:952688 | Cone7ag0215 | Cone-Chr7:920899 | 7.91E-210 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone7ag0215 | K27504 | - | csv:101203938 | 454.136 |