Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone7ag0217 | ATGAATGAGCATCTCAAGTTCTTACGCTCCATCACCCCATGTTTCTATATCAAAAGGGGAGATCAAGCATCGATAATAGGGGGTGTGATCGAGTTCATCAAGGAGTTGCACCAGATTCTACAGTCATTGGAATCCAAGAAACGAAGGAAGAGCCTGAGCCCTAGCCCTGGTCCAAGCCCTAGGCAAGTAATGCTGCAGCACTCAAACCAGCTTACACTTCATCATCATCATCATCATGGTTCAGTACTACGTCAGCTAATCGACAGCACTCCGATTCGGTTTGATGGGATTAAGGTTAATAAGGAACTTCACGGAACATGTTGCAACTCTTCGGTTGCTGACGTGGAAGCAGAGATATCAGGGTCAAACGTGATGTTGAAAATTATATGCAGGCGAATACCAGGTCAGCTGGTCAAGATTATCAATGTGTTGGAGAAGCTCTCGTTTGAGGTCCTACATCTCAACATCAGTAGCATGGAAGACACAGTTCTATACTCTTTCGTTGTTAAGGTATTGAAGATATATATATACTAA | 534 | 43.45 | MNEHLKFLRSITPCFYIKRGDQASIIGGVIEFIKELHQILQSLESKKRRKSLSPSPGPSPRQVMLQHSNQLTLHHHHHHGSVLRQLIDSTPIRFDGIKVNKELHGTCCNSSVADVEAEISGSNVMLKIICRRIPGQLVKIINVLEKLSFEVLHLNISSMEDTVLYSFVVKVLKIYIY | 177 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 935531 | 936202 | - | Conep07aG0022200.1 | Cone7ag0217 | 440813 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone7ag0217 | 177 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 1 | 55 | IPR036638 | GO:0046983(InterPro) | |
| Cone7ag0217 | 177 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 1 | 36 | IPR011598 | GO:0046983(InterPro) | |
| Cone7ag0217 | 177 | PANTHER | TRANSCRIPTION FACTOR FAMA | 1 | 171 | IPR044283 | GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0010052(InterPro)|GO:0010374(PANTHER)|GO:0045893(PANTHER) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone7ag0217 | Cone-Chr7:935531 | Cone7ag0388 | Cone-Chr7:1711919 | 3.38E-32 | dispersed | |
| Cone4ag0209 | Cone-Chr4:963164 | Cone7ag0217 | Cone-Chr7:935531 | 5.92E-95 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone7ag0217 | - | - | - | 0.0 |