Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag0217 ATGAATGAGCATCTCAAGTTCTTACGCTCCATCACCCCATGTTTCTATATCAAAAGGGGAGATCAAGCATCGATAATAGGGGGTGTGATCGAGTTCATCAAGGAGTTGCACCAGATTCTACAGTCATTGGAATCCAAGAAACGAAGGAAGAGCCTGAGCCCTAGCCCTGGTCCAAGCCCTAGGCAAGTAATGCTGCAGCACTCAAACCAGCTTACACTTCATCATCATCATCATCATGGTTCAGTACTACGTCAGCTAATCGACAGCACTCCGATTCGGTTTGATGGGATTAAGGTTAATAAGGAACTTCACGGAACATGTTGCAACTCTTCGGTTGCTGACGTGGAAGCAGAGATATCAGGGTCAAACGTGATGTTGAAAATTATATGCAGGCGAATACCAGGTCAGCTGGTCAAGATTATCAATGTGTTGGAGAAGCTCTCGTTTGAGGTCCTACATCTCAACATCAGTAGCATGGAAGACACAGTTCTATACTCTTTCGTTGTTAAGGTATTGAAGATATATATATACTAA 534 43.45 MNEHLKFLRSITPCFYIKRGDQASIIGGVIEFIKELHQILQSLESKKRRKSLSPSPGPSPRQVMLQHSNQLTLHHHHHHGSVLRQLIDSTPIRFDGIKVNKELHGTCCNSSVADVEAEISGSNVMLKIICRRIPGQLVKIINVLEKLSFEVLHLNISSMEDTVLYSFVVKVLKIYIY 177
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 935531 936202 - Conep07aG0022200.1 Cone7ag0217 440813
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag0217 177 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 1 55 IPR036638 GO:0046983(InterPro)
Cone7ag0217 177 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 36 IPR011598 GO:0046983(InterPro)
Cone7ag0217 177 PANTHER TRANSCRIPTION FACTOR FAMA 1 171 IPR044283 GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0010052(InterPro)|GO:0010374(PANTHER)|GO:0045893(PANTHER)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone7ag0217 Cone-Chr7:935531 Cone7ag0388 Cone-Chr7:1711919 3.38E-32 dispersed
Cone4ag0209 Cone-Chr4:963164 Cone7ag0217 Cone-Chr7:935531 5.92E-95 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag0217 - - - 0.0