Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone7ag0230 | ATGGTGGTCATTGCGATCATTGTCACCGTTCTCCTCTTCATGCTGCTTCTGATCCTCCTTCTCCTCCTTCTTGCCTTCAAACCTTGGCGCTTCTTTTCCTCTTCTTCTCGTTCCGTCTCAATCCAGGGTGTTGATCTAGAGAGGCCGCTTTTGTCAAATCCCAACAATCTAAATCAAACTCGAAGCTCTGAACTTCCAAGAGATTACAACTTAGACGGAGATATTCATACTGAGGGGGATTATCGGTCCCCTCTTATGCACGGTCTTGTTCATAAAAGGGTTTCAACTGCATCTCCTCATCTGAATCAAGGTGGTAGCATGGTTTCAGATGTGATTTCCGATTCCTTGGATGATATTACTGTTGGCCAGACACTTAAGCGTTCATATGTGACAGACCAGTTTGTCGAATTCCAAATACATAGCAGACAAAGTAGTGGAAATGAGAAACCTCAAGAATACATGCAGAAAGATATCTTACATCGAAGAAGCTTCCTCTCTCTGGAGGTTATCTCTGGTCCATCCTGTGGACTTCAATTTTCATTACAGTCAACAAATAGCTCTAAGCTTCCACTGACCCTTGGGAGAGTGTCTCCTAGTGATCTACAGCTAAAGGATTCAGAGGTGTCAGGGAAGCATGCAATGATAAGCTGGAATATAAATAAATTGAAATGGGAGCTGGTGGACATGGGTAGCCTAAATGGAACACTTTTGAATTCTCAACCAATCAACCATCCTGATTGCGGAAGTAGACATTGGGGAGATCCAATTGAGCTTGCAAGTGGAGACATAATAACTCTTGGTACAACCTCCAAAGTATATGTTCAAATTACACCTGCTACTGAGAGCGCGGTTCCTTTCGGAGTTGGTATGGCTTCAGATCCTATGGCTGTTCGGCGAGGAGGAAAGAAGCTTGCTATGGAAGATGTATCCTATTGTCAATGGCCCCTTGCTGGAACTGATCAGTTTGGATTATTTGGTATATGTGATGGACACGGTGGAGTTGCGGCTGCTAGATCTGCTAGCGAAATTCTTCCAGAGAGGGTTGCTACTATTTTGTCGGATTCAATGAAAAGGGAAAGAGTTTTATCTCTATGTGATGCTTCAGATGTTCTCAGAGATGCATTTTCTCAGACAGAGGCTTCCATGAATCACCATTATGAGGGTTGTACTGCAACATTGCTTCTGGTATGGACTGATGGCGATGATAAGTACTTTGCGCAATGTGCGAATGTTGGAGACTCTGCTTGTGTGCTGAATTTTGATGGGAAACAGATAAAGATGACTGAAGACCATAGAATAACCAGCAAATCGGAAAGACAGAGAATTGAAAAAACAGGAGAGCCATTGAAAGATGGGGAGACACGTCTATGCGGTTTAAACCTAGCACGTATGCTAGGAGACAAATTTCTCAAACAACAAGATAGTCGTTTTAGTTCAGAGCCTTATGTAAGTCAAGTTGTTCATATTGATCAAGCATGCAGTGCATTTGCGCTCATGGCCAGTGATGGCTTATGGGATGTGATAAGTCTCGAGAAAGCAATTCAGCTAGTTTTTCAGGCAAGGGAGAGATACTGTACGGACTCAGAGAACCCGGCTGAAAAGATTGCAAATTTTTTGTTGAGTGAGGCTAGAACATTGCGGACGACGGACAACACTTCAATACTTTTCTTAGATTTTAACACTTCCCATATCAATTCTTGTAAAATCTGGTCACTCCAATGCATGGACGACTGTCGTCCGACCAGACTAGCAAGGATCATACCTGTTGTAAAAAATGGCGAAGAAGCAGAAGCGATTCGAGTCAGAAGCAGAGAACAGAGAACAAACGAGGTGCAGAATGGGCCTGAGCTCGTCAATGGAGAATCTACTGAGAAAAAGAAGTCCTCGACGAGTAATCCCGAGGATGAGCACAGGGAGGTAGACCTGAAGTCCTCAGTGAGCATAGCCCTTCCGGGTTCCATCATCGACAACGCTCAATCCCTTGAGCTCGCTACTCGTGTACTCTCTCTTCTCTCTGATTCAATCTCCGTTCAGTCGCCTGAGAATATTTCCTCTGTGGTAGTATTTGACAGTGGATGTAGTTCAGGAAAAGGCTCTGATGAGAATGAAAGTGGTGCGGCTTTTCTTTTAAGGATCTTGTGGTACCTTGAGACACCACAATACTTGAGAAAAGCTCTATTCCCAAAGCATTTAACAGCTTAA | 2202 | 43.69 | MVVIAIIVTVLLFMLLLILLLLLLAFKPWRFFSSSSRSVSIQGVDLERPLLSNPNNLNQTRSSELPRDYNLDGDIHTEGDYRSPLMHGLVHKRVSTASPHLNQGGSMVSDVISDSLDDITVGQTLKRSYVTDQFVEFQIHSRQSSGNEKPQEYMQKDILHRRSFLSLEVISGPSCGLQFSLQSTNSSKLPLTLGRVSPSDLQLKDSEVSGKHAMISWNINKLKWELVDMGSLNGTLLNSQPINHPDCGSRHWGDPIELASGDIITLGTTSKVYVQITPATESAVPFGVGMASDPMAVRRGGKKLAMEDVSYCQWPLAGTDQFGLFGICDGHGGVAAARSASEILPERVATILSDSMKRERVLSLCDASDVLRDAFSQTEASMNHHYEGCTATLLLVWTDGDDKYFAQCANVGDSACVLNFDGKQIKMTEDHRITSKSERQRIEKTGEPLKDGETRLCGLNLARMLGDKFLKQQDSRFSSEPYVSQVVHIDQACSAFALMASDGLWDVISLEKAIQLVFQARERYCTDSENPAEKIANFLLSEARTLRTTDNTSILFLDFNTSHINSCKIWSLQCMDDCRPTRLARIIPVVKNGEEAEAIRVRSREQRTNEVQNGPELVNGESTEKKKSSTSNPEDEHREVDLKSSVSIALPGSIIDNAQSLELATRVLSLLSDSISVQSPENISSVVVFDSGCSSGKGSDENESGAAFLLRILWYLETPQYLRKALFPKHLTA | 733 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 979564 | 984773 | + | Conep07aG0023500.1 | Cone7ag0230 | 440826 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone7ag0230 | 733 | Pfam | FHA domain | 192 | 267 | IPR000253 | GO:0005515(InterPro) | |
Cone7ag0230 | 733 | SMART | FHA_2 | 190 | 242 | IPR000253 | GO:0005515(InterPro) | |
Cone7ag0230 | 733 | ProSitePatterns | PPM-type phosphatase domain signature. | 324 | 332 | IPR000222 | GO:0043169(InterPro) | |
Cone7ag0230 | 733 | MobiDBLite | consensus disorder prediction | 620 | 640 | - | - | |
Cone7ag0230 | 733 | Pfam | Protein phosphatase 2C | 295 | 552 | IPR001932 | - | |
Cone7ag0230 | 733 | FunFam | Protein phosphatase 2C 70 | 160 | 294 | - | - | |
Cone7ag0230 | 733 | CDD | PP2Cc | 299 | 559 | IPR001932 | - | |
Cone7ag0230 | 733 | CDD | FHA_PP2C70-like | 165 | 274 | - | - | |
Cone7ag0230 | 733 | Gene3D | - | 636 | 733 | IPR029026 | - | |
Cone7ag0230 | 733 | Pfam | Putative RNA methyltransferase | 646 | 730 | IPR003750 | - | |
Cone7ag0230 | 733 | Gene3D | - | 295 | 570 | IPR036457 | - | |
Cone7ag0230 | 733 | SUPERFAMILY | alpha/beta knot | 645 | 731 | IPR029028 | - | |
Cone7ag0230 | 733 | ProSiteProfiles | Forkhead-associated (FHA) domain profile. | 191 | 242 | IPR000253 | GO:0005515(InterPro) | |
Cone7ag0230 | 733 | MobiDBLite | consensus disorder prediction | 601 | 640 | - | - | |
Cone7ag0230 | 733 | FunFam | Protein phosphatase 2C 70 | 295 | 566 | - | - | |
Cone7ag0230 | 733 | SUPERFAMILY | SMAD/FHA domain | 164 | 274 | IPR008984 | GO:0005515(InterPro) | |
Cone7ag0230 | 733 | Gene3D | - | 160 | 294 | - | - | |
Cone7ag0230 | 733 | SMART | PP2C_4 | 281 | 557 | IPR001932 | - | |
Cone7ag0230 | 733 | ProSiteProfiles | PPM-type phosphatase domain profile. | 287 | 559 | IPR001932 | - | |
Cone7ag0230 | 733 | SUPERFAMILY | PP2C-like | 300 | 560 | IPR036457 | - | |
Cone7ag0230 | 733 | PANTHER | PROTEIN PHOSPHATASE 2C | 300 | 559 | IPR015655 | GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0006470(PANTHER) | |
Cone7ag0230 | 733 | CDD | HsC9orf114-like | 645 | 729 | IPR003750 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone15ag0823 | Cone-Chr15:5471335 | Cone7ag0230 | Cone-Chr7:979564 | 3.24E-269 | dispersed | |
Cone7ag0230 | Cone-Chr7:979564 | Cone4ag1725 | Cone-Chr4:12767565 | 5.99E-20 | dispersed | |
Cone4ag0221 | Cone-Chr4:1016629 | Cone7ag0230 | Cone-Chr7:979564 | 1.44E-39 | transposed | |
Cone4ag0220 | Cone-Chr4:1013385 | Cone7ag0230 | Cone-Chr7:979564 | 1.44E-302 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone7ag0230 | K01090 | - | csv:101217195 | 769.229 |