Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag0248 ATGAATGGTGTTTTTACAAGCACTGATTTGGATTCCAGCCAATATGTTGAAGTTGATCCTACAGGGAGATATGGAAGATACAATGAGATTCTGGGAAAAGGAGCTTCAAAGATAGTGTATAGAGGGTTTGATGAGTATGAAGGGATAGAAGTGGCATGGAATCAGGTGAAGCTGAATGACTTTCTTCAAACACCTGAAGATCTAGAGAGACTTTACTCTGAAATCCATCTGCTCAAAACATTGAAACATAACAACATCATGAAGCTCTATGCTTCTTGGGTTGACATTTCTAACAGGAACATCAACTTCATTACAGAGATGTTCACCTCTGGCACTCTCAGACAGTATAGATTAAGACACAAGAGAGTTAACATTAGAGCTGTGAAGCATTGGTGCAGGCAGATTCTGAGAGGGCTTCTTTATCTTCATAGCCATGACCCCCCTGTTATTCACAGAGACCTTAAATGTGACAATATTTTTGTGAATGGCAACCAGGGAGAAGTCAAGATTGGTGATCTTGGCCTCGCTGCGATTCTTCGAAAATCTCATGCCGATAGATGTGTTGGAACACCTGAATTTATGGCCCCAGAAATTTATGAAGAGGAATACAATGAGTTGGTAGATATATACTCCTTCGGGATGTGTATATTGGAGATGGTTACTGTCGAATACCCGTATAGTGAATGCCTCCACCCTGCTCAGATTTACAAGAAAGTCATATCTGGAAAAAAACCAGAGGCTCTCAACAAAGTTGAAGATCCGGAAGTTCGCCAGTTTGTCGAGAAATGTTTAGCTTCTGTGTCACATAGGCTCTCGGCTAGTGAATTACTAAAAGACCCATTTCTCCAAGTTGACTATTATGGATCCTTTCTAAGGCCGATAGACTACAAACCCAAAACTGAAGCAAGTGGATTCGATCTCTTCTCCTATCAAGAGGATGAGCATTTCACAGATGTAGACATTACAATCAAAGGCAAGAGAGGAGAAGCAGATGGTATCTTCTTTAGGCTCAGAATTGCTGACCAAGAAGGTCGCATTCGGAATATCTACTTCCCTTTTGATTTAGAGACAGATACTGCATTGAGTGTTGCAAATGAAATGGTTTCCGAGCTTGACATTACTGACCGAGAAGTGACAAAAATAGCAGATCTTATAGACAGTGAAATCTCTACCCTCGTGCCAGAATGGAAGAGTCAAATAGGTGTGGAGGAAGGCGCACATTGTGCTGATTCAAGTTTCTGTCACAAGTGTGCTTGTTATAGTTCCTCATCTGAATGTGTTTCGCCCAATCATCCAAGTCAATGCAGTAATCAAGGATGTGCTGCTGCTATCCATGGTCGTTTCGAAGAAATCACGTACCAATTTGATGATCTGGAAATGAGCTCAAGAAATTTAACTGGAGCCATCAATCACAAAGAATCACATGAAAACTTGGTGGAGCAAAGCAACGAAGAAGTTATGACTAGAGATCCGGTCCAATCTAATGCTTCAGCGGCTCATGCCTTCTCGGACGACTTTGAAAATGAAATTCGGCAGGAATTAAGATGGCTCAGAGCAAAGTTTCATATGCAGTTGAGGGAGATTAAAGACCAACAGTTAGGAGTTAAATTCAAATCTTTGAGCGTATGTCAAAGTCCAGAACATAAGTTTATGAAGAAAGGAAAGAATAAACCTCCCCTGAATTTCACTTGCCAAACTCCTGTTCATACATTGGAGACAATTGGCGAGTCTTCGAGCCCGGAGCAGATGTTCACTGCCAAGAGTTTCTACACTGGAGCTTTGCTTCCAGAATCAAATTCTCTTCACCGAGCAACTTCCCTTCCAGTTGATGCTATAGATTTTTGA 1845 41.3 MNGVFTSTDLDSSQYVEVDPTGRYGRYNEILGKGASKIVYRGFDEYEGIEVAWNQVKLNDFLQTPEDLERLYSEIHLLKTLKHNNIMKLYASWVDISNRNINFITEMFTSGTLRQYRLRHKRVNIRAVKHWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHADRCVGTPEFMAPEIYEEEYNELVDIYSFGMCILEMVTVEYPYSECLHPAQIYKKVISGKKPEALNKVEDPEVRQFVEKCLASVSHRLSASELLKDPFLQVDYYGSFLRPIDYKPKTEASGFDLFSYQEDEHFTDVDITIKGKRGEADGIFFRLRIADQEGRIRNIYFPFDLETDTALSVANEMVSELDITDREVTKIADLIDSEISTLVPEWKSQIGVEEGAHCADSSFCHKCACYSSSSECVSPNHPSQCSNQGCAAAIHGRFEEITYQFDDLEMSSRNLTGAINHKESHENLVEQSNEEVMTRDPVQSNASAAHAFSDDFENEIRQELRWLRAKFHMQLREIKDQQLGVKFKSLSVCQSPEHKFMKKGKNKPPLNFTCQTPVHTLETIGESSSPEQMFTAKSFYTGALLPESNSLHRATSLPVDAIDF 614
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1045463 1047990 + Conep07aG0025300.1 Cone7ag0248 440844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag0248 614 Pfam Protein kinase domain 28 282 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag0248 614 FunFam Probable serine/threonine-protein kinase WNK1 10 106 - -
Cone7ag0248 614 FunFam probable serine/threonine-protein kinase WNK9 108 287 - -
Cone7ag0248 614 CDD STKc_WNK 23 282 - -
Cone7ag0248 614 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 12 525 IPR050588 GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0035556(PANTHER)
Cone7ag0248 614 ProSitePatterns Serine/Threonine protein kinases active-site signature. 149 161 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone7ag0248 614 SUPERFAMILY Protein kinase-like (PK-like) 19 283 IPR011009 -
Cone7ag0248 614 Gene3D Transferase(Phosphotransferase) domain 1 108 287 - -
Cone7ag0248 614 Gene3D Phosphorylase Kinase; domain 1 10 106 - -
Cone7ag0248 614 ProSiteProfiles Protein kinase domain profile. 25 282 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag0248 614 SMART serkin_6 25 282 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag0248 614 Gene3D - 316 399 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag0070 Cone-Chr16:356792 Cone7ag0248 Cone-Chr7:1045463 1.03E-173 dispersed
Cone1ag0779 Cone-Chr1:53827788 Cone7ag0248 Cone-Chr7:1045463 1.34E-158 dispersed
Cone1ag1727 Cone-Chr1:58069521 Cone7ag0248 Cone-Chr7:1045463 1.84E-228 dispersed
Cone3ag0714 Cone-Chr3:3663301 Cone7ag0248 Cone-Chr7:1045463 2.26E-193 dispersed
Cone5ag0535 Cone-Chr5:2272794 Cone7ag0248 Cone-Chr7:1045463 3.08E-220 dispersed
Cone5ag1044 Cone-Chr5:4561701 Cone7ag0248 Cone-Chr7:1045463 2.14E-146 dispersed
Cone6ag0029 Cone-Chr6:182398 Cone7ag0248 Cone-Chr7:1045463 5.88E-118 dispersed
Cone7ag0248 Cone-Chr7:1045463 Cone9ag1249 Cone-Chr9:9190995 1.51E-146 dispersed
Cone10ag0695 Cone-Chr10:3509380 Cone7ag0248 Cone-Chr7:1045463 4.77E-150 wgd
Cone4ag0242 Cone-Chr4:1093750 Cone7ag0248 Cone-Chr7:1045463 1.07E-206 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82997 PF13920 zf-C3HC4_3 7.90E-12 CL0229 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag0248 K08867 - vvi:100240750 805.053